Labeo rohita (rohu): 127180608
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Entry
127180608 CDS
T09007
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04115
p53 signaling pathway
lroh04120
Ubiquitin mediated proteolysis
lroh04137
Mitophagy - animal
lroh04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127180608 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
127180608 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
127180608 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
127180608 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127180608 (siah1)
Enzymes [BR:
lroh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127180608 (siah1)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
127180608 (siah1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
Motif
Other DBs
NCBI-GeneID:
127180608
NCBI-ProteinID:
XP_050990719
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All DBs
Position
18:11751159..11771401
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AA seq
334 aa
AA seq
DB search
MSATIRLQPVYSWKGVLKLFSCIAARTASKPKEVHTFQGKKKDVLGNHMDEEMSRQTATA
LPTGTSKCPPSQRVPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPK
LTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAEHEELCEFRPYSC
PCPGASCKWQGSLDAVMPHLLHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFH
FMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIA
TAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctactattagactacagcctgtgtactcatggaagggggtgctcaagctcttc
tcttgcatagcggccagaactgctagtaaacctaaagaggtccacacatttcaaggaaag
aagaaagacgtacttgggaatcatatggacgaagaaatgagtcgccagactgccacagcg
ctgcccacaggaacctctaagtgtcccccttctcagcgcgtccccaccttgtcgggcacc
accgcatccaacagtgacctcgccagcctgttcgagtgcccagtctgttttgactatgtg
ctgccgcccatcctgcagtgccagagtggccatttggtttgtagcaactgccggcccaaa
ctcacctgctgccccacctgcagaggcccgctcggctcgatccgcaatttggccatggag
aaagtggccaactcagtgcttttcccctgcaagtatgcctcatcgggctgcgaagtcacc
ctaccacacacagacaaggctgaacatgaggagctatgtgaattccggccatactcttgc
ccttgtcccggcgcctcctgcaagtggcagggatctctcgacgccgtcatgccccacttg
ctgcaccagcacaagtccataaccacgctacagggtgaggatattgtcttcctggccaca
gacatcaacttgcctggggcggtggactgggtcatgatgcagtcgtgcttcggcttccat
tttatgctcgtgctggagaagcaggagaaatacgacggccaccagcagttcttcgccatc
gtgcagctgatcggcacacggaagcaggcggaaaacttcgcctaccggctggagctgaat
ggccaccggcggcgactcacctgggaggcgacgccacgctccatccatgagggcatcgcc
accgccatcatgaacagtgactgccttgtgtttgacacctccattgctcagctgttcgca
gaaaacggcaacctgggcatcaacgtcaccatatccatgtgctga
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