Labeo rohita (rohu): 127180659
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Entry
127180659 CDS
T09007
Symbol
myo5aa
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
127180659 (myo5aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127180659 (myo5aa)
04131 Membrane trafficking [BR:
lroh04131
]
127180659 (myo5aa)
03029 Mitochondrial biogenesis [BR:
lroh03029
]
127180659 (myo5aa)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lroh04812
]
127180659 (myo5aa)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
127180659 (myo5aa)
mRNA cycle factors
P-body specific factors
127180659 (myo5aa)
Membrane trafficking [BR:
lroh04131
]
Others
Actin-binding proteins
Myosins
127180659 (myo5aa)
Mitochondrial biogenesis [BR:
lroh03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
127180659 (myo5aa)
Cytoskeleton proteins [BR:
lroh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
127180659 (myo5aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
nSTAND3
MC7
AAA_16
HTH_17
Motif
Other DBs
NCBI-GeneID:
127180659
NCBI-ProteinID:
XP_050990798
LinkDB
All DBs
Position
18:complement(33823289..33906701)
Genome browser
AA seq
1892 aa
AA seq
DB search
MNQELDFMFVKYARVWIPDVEEVWKSAELTKDYRQGDGVLQLQLEDGKELEYKLDSKTNN
LPHLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYETLPI
YGTDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMR
YFATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKKYHIIGAN
MRTYLLEKSRVVFQADEERNYHIFYQLCASAHLPELKALKLGKADGFHYTKQGRNPVIDG
VDDAKEMSTTRNAFTLLGVNESYQMGLFQILASILHLGNVEVKDRDADSSIIPPNNGHLS
VFCELMGVTYQDMSHWLCHKKLKTATETYIKPIPKLQAINARDALAKHIYAKLFNWIVDH
VNKALHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYM
KEQIPWTLIDFYDNQPCINLIEAKMGILDLLDEECKMPKGSDDSWAQKLYNTHLKTCALF
EKPRMSNKAFIIQHFADKVEYQCDGFLEKNKDTVNEEQINVLKASKFDLLVELFQDEEKA
TSPAGAAPATGGRTRLSVKPDKNKAGQASKEHKKTVGLQFRNSLQLLMETLNATTPHYVR
CIKPNDYKYAFTFDPKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDV
LTDKKMTCKNVLEKLVQDPDKYQFGKTKIFFRAGQVAYLEKLRADKLRAACIRIQKTIRC
WLAHKKYLRMKHAATTIQRYVRGYQARCLAKFLRRTRAAIIIQKYQRMYVQRKCYKRKQA
AALAMQCILRAYMARQLYKALLREHKAILIQKMVRGWLARQWYKRTIEAIVYLQCCVRRM
RAKRELKKLKIEARSVEHFKKLNIGMENKIMQLQRRIDDQNKENRVLSERLNTLEVSHAT
ESERLRVELTRLRGAEEDAKNNANKVTSLLEELERLRKDLQNTQKEKKAIEDWAQTYQDE
MEQMIAELKEQNHLLKNEKNDLNRLIQEQGQQWTEKMQRALKEETQQLENDLNEERSRYQ
NLLTEHLRLEEKYDDLKEEITLAVNVPKPGHRRTDSTHSSNESECTYNSEFAESEEGTRG
GEDVSKSILDMSLFLKLQKRVSELEQEKQSLQNELDRREEQFQRARARDDEEHKKARSAE
LEYESLKRQELESENKKLKHHLNEMRQSLRGSAEAGSAAPGSPAYTVLLDQLNSSNEELE
VRKEEVLILRSQLVSQKEAMQHKETMTEPLPYIEDVQKLTDAKEISQAYMGLKETNRSPR
FTRRPTEVNELVSRLRSPFPDYHKLNEDGELWLVYEGLKETNRLLESQLQAQRRSHENEV
EVLRGELQSVKEENNRQQQLLAQNLQLPPEARIEASLQHEITRLTNENLELHSDDPKEYK
AYRISMLRRMVDLMEQLEKQDKTVRKLKKQLKVFAKKINDLEGGQMDVSPGQTTDEPVHP
VNIPRREKDFQGMLEYKKEDELKLVKNLILELKPRGVAVNLIPGLPAYILFMCLRHADYV
NDDQKVRSLLTSVINSIKKILKKRGDDFETVSFWLSNTCRFLHCLKQYSGDEQFMKHNTP
KQNDHCLSNFDLAEYRQVLSDLAIQIYQQLIKCMENILQPMIVSGMLEHETIQGVSGVKP
TGLRKRTSSIADEGTYTLDSIIRQLNSFHSIMCQHGTDPELIKQVVKQQFYIIGAVTLNN
LLLRKDMCSWSKGMQIRYNVSQLEEWLRDKNLMTCGAKETLEPLIQAAQLLQVKKKTDED
AEAICSMCNSLSTAQIVKVLNLYTPVNAFEERVSVLFIRTIQTRLRDRKESPQLLMDTKL
IYPVTFPFNPSSLALETIQIPGSLNLAFLTRV
NT seq
5679 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggagttggattttatgtttgttaaatacgcacgggtctggatcccggatgta
gaggaagtgtggaagtcagcagagctcaccaaggactacagacaaggagacggagtactg
cagctacagctggaggatggaaaggaactggagtacaaattggactccaagacgaacaac
ttaccacacctccgtaatccagatatcctggtgggagaaaatgacctgacggctctcagt
taccttcacgagcccgctgtgctacacaatctgaaagtgcgcttcatcgattccaaactc
atctacacatactgcggtattgttttagtcgctataaacccatatgagacgctgcccatc
tatggaacggacatcattaacgcgtacagcgggcagaatatgggtgacatggaccctcac
atcttcgcagtggcagaagaggcttacaaacagatggcaagggatgagaggaatcagtcg
attattgtgagcggagaatccggagcagggaaaaccgtttcggctaaatacgccatgcgt
tactttgccacggtcagcggctctgccagcgaagcaaatgtggaagaaaaagttctggca
tcaaaccccatcatggagtccatcggtaatgccaagaccaccaggaatgacaatagcagt
cgatttgggaaatacattgagattggctttgataagaagtatcacataattggtgcgaac
atgaggacatatctgttggagaaatcacgtgtcgtatttcaggcggatgaggagaggaat
tatcacatcttctatcaactctgtgcgtctgctcacctcccggagttgaaagccctgaaa
cttggaaaggccgacggttttcactacaccaaacagggcaggaacccagtgatagatgga
gtagatgatgccaaggagatgtcgaccaccagaaacgccttcacgctgctaggtgtaaat
gagtcctatcagatgggcttgtttcagattctcgcttcaattttgcacctggggaacgtg
gaagtgaaggacagagatgcggacagcagtattattccaccaaataatggtcacctgagt
gtgttttgtgaattgatgggcgtgacatatcaagacatgtctcattggctgtgtcataag
aagctgaagacggcaacagagacgtacataaagcccatccccaaactacaggccataaac
gcccgcgacgctctcgctaaacacatctacgccaaactcttcaactggatcgtggaccat
gtgaacaaagcgctgcattctacggtcaaacagcactcgttcatcggagtcctggacatt
tacgggtttgagacttttgaaatcaacagttttgaacagttctgtattaattatgccaat
gagaaactacagcaacagttcaacatgcatgtgtttaagttggagcaggaggagtatatg
aaagagcagatcccctggactctcattgatttctatgataatcagccgtgtatcaacctc
atcgaggccaagatgggcatcctggacctgctggatgaagagtgcaagatgccgaagggt
tctgatgactcctgggctcagaaactctataacactcatttgaagacgtgtgcacttttt
gaaaaaccacggatgtccaataaagctttcattattcagcactttgcagataaggtggag
tatcagtgtgatggttttctggagaagaataaagacactgtgaacgaggagcagataaat
gttctgaaagccagtaagtttgacctgctggtggagctgttccaggatgaggagaaagcc
acgagtccagccggtgctgctcctgccactggaggacgcactcgcctcagcgtcaaacca
gacaagaacaaagcaggccaggccagcaaagaacacaagaagacagtcggactgcagttc
cgtaactctctgcagctgctgatggagacactgaatgcgactacgccacattatgttcgc
tgcatcaaacccaacgattacaaatatgccttcacgttcgaccccaagagggcagtgcag
cagctgcgcgcatgtggagttttggaaacgatccgcatctctgcagctggtttcccatcc
aggtggacgtatcaggagttctttagcaggtatcgtgtcctgatgaaacaaaaagatgtt
ctgacagataagaagatgacctgtaagaatgttctggagaaactggtgcaggatccagat
aagtaccagtttggcaagaccaagatctttttccgtgcaggccaggttgcgtacctggag
aaactgcgtgcagataagctgcgtgccgcctgcatccgcatccagaagactatccgctgc
tggctggcgcacaagaagtacctgcgcatgaaacatgctgccacaaccatccagagatac
gtccgtggataccaggcccgctgtcttgcaaaattcctgcgtcgcacacgtgctgcgatc
atcattcagaagtaccagcgcatgtacgtccagagaaaatgttacaaacgcaagcaggct
gccgctctggccatgcagtgcatcctcagggcgtacatggcccgacagctgtacaaagcg
cttctgcgtgagcacaaggccatcctcattcagaagatggtgcgcggctggttggcgcgg
cagtggtacaagcggacgatcgaagccatcgtgtacctgcagtgctgcgtccgccgtatg
cgagccaagagagaactcaagaaactcaagatcgaggctcgttcggtggagcacttcaag
aaactcaacatcggcatggagaacaagatcatgcagctgcagcgcaggatagacgaccag
aacaaggagaaccgtgtactcagcgagcgtttgaacaccctggaggtcagccacgctacg
gagtccgagcgtctgcgtgtggagttgacgcgtctgcgaggggcagaggaggacgccaaa
aacaacgccaacaaagtcacatctcttctggaggagctggagcgactgcgcaaagatctg
cagaacacacagaaggagaagaaagccatcgaggactgggcacagacctaccaggacgag
atggaacagatgatcgcagaactgaaggagcaaaaccacctgctgaagaacgagaaaaac
gacctgaaccgactgatccaggaacagggccagcagtggacagagaaaatgcagagggca
ctgaaggaggaaacgcagcagttagaaaacgatttaaacgaggaacgctctcgctaccag
aacctcctcaccgaacacctgcgactagaggagaaatacgacgatttgaaagaggagatc
acacttgctgtaaatgttccaaaacctggtcacaggcgcacagactccacacacagcagc
aacgaatcagaatgcacctacaattcagagtttgccgagtccgaggaagggacccgcgga
ggggaggatgtttccaagtcaatcctggacatgtccctgttcctaaagttgcagaagaga
gtatccgaactagagcaagaaaaacagtcactgcagaacgagctggatcggagagaagag
cagtttcagcgggctagagctagggatgatgaggaacataagaaagctcgtagcgctgag
ctggagtatgaatctctcaagcgtcaggagttggagtcagagaataagaagctgaagcat
catttgaatgagatgcgtcagtctctgagaggcagcgctgaggccggttccgccgctccg
ggttctcctgcgtacacggtcctgctggatcagctgaactcctccaacgaggagctggag
gtgcggaaggaggaggtgctcatactgcgctctcaactcgtcagtcagaaagaggccatg
caacacaaggagaccatgactgaacctttgccgtacattgaggatgtgcagaagctgact
gatgccaaggagatctcccaggcctacatgggccttaaagagaccaacagatcacccagg
tttacacgcagaccgactgaagtgaacgagcttgtgagcaggttgagatcccccttccct
gactaccataagctgaatgaggatggagaactgtggctggtttatgaagggttaaaggaa
actaacaggttgttggagtctcagttgcaggctcagcgtcggtctcacgagaacgaggtg
gaggttttgcgtggagaactgcagagcgttaaagaggagaacaaccgtcagcagcagctg
ttagctcagaacctgcagcttcctccagaggcccgaatcgaggccagtctacagcacgag
atcacgcgcctcaccaacgagaacctggaacttcactctgatgatccaaaggagtataaa
gcctacagaatcagcatgttacgcaggatggttgatcttatggagcaactagagaaacag
gacaagaccgtccgcaaactgaagaaacagctcaaagtttttgcaaagaagatcaatgat
ctggaaggtggtcagatggatgtgtctccaggacagacgaccgacgaacctgttcatcca
gtgaacatcccacgcagggagaaagatttccagggaatgctggaatataagaaagaggat
gaactcaaactggtcaagaacctcatactagagctgaagcctcgtggtgtggcagtgaat
ctgatcccaggtctgccggcatacatcctcttcatgtgtctgcgtcatgccgactacgtt
aacgatgaccagaaggtccgatctctactcacctctgtcatcaacagcatcaagaagatc
ctcaagaaaagaggtgatgactttgagacggtttccttctggttgtccaatacatgccgt
ttcctgcactgcctgaaacagtacagtggcgacgagcaattcatgaagcataacactcct
aaacagaatgatcactgtctctccaactttgacctggccgagtaccggcaggttctgagt
gatctggccattcagatctaccagcagctcatcaagtgtatggagaacatcctgcagccc
atgatcgtctctggcatgctggaacatgaaaccatccagggcgtgtccggggtaaagccc
acgggtctccgtaagaggacgtccagcatcgccgacgagggcacgtacacgctggactcc
atcatccgccagctcaactccttccactccatcatgtgtcagcacggcaccgacccggag
ctcatcaaacaggtggtcaagcagcagttctacatcatcggcgccgtcaccctcaacaac
ctgctgctgcgcaaagacatgtgctcctggagcaagggcatgcagatcaggtataacgtg
agtcagctggaggagtggctgagagataagaacctcatgacatgcggcgcgaaagagacg
ctggagccgttgattcaggccgcacaactgctgcaggtcaagaaaaagacggatgaggac
gctgaggccatctgctccatgtgtaacagcctctctacagcacagattgtgaaggtgctg
aacttgtatacgcccgtcaatgcgtttgaagagcgtgtgtcagttctgttcataagaaca
atacagacacgtttacgtgatcgaaaggagtctcctcagctgctgatggacaccaaactc
atctaccccgtcaccttcccctttaacccctcctccctggccctggaaaccattcagata
cccggcagcctcaatctggccttcctcactcgtgtgtag
DBGET
integrated database retrieval system
