Labeo rohita (rohu): 127180699
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Entry
127180699 CDS
T09007
Symbol
abcc8b
Name
(RefSeq) ATP-binding cassette sub-family C member 8 isoform X1
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127180699 (abcc8b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lroh02000
]
127180699 (abcc8b)
Transporters [BR:
lroh02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
127180699 (abcc8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
ABC_ATPase
AAA_23
nSTAND1
DEAD
RsgA_GTPase
TraD_N
Stevor
Motif
Other DBs
NCBI-GeneID:
127180699
NCBI-ProteinID:
XP_050990872
LinkDB
All DBs
Position
18:25581096..25615025
Genome browser
AA seq
1588 aa
AA seq
DB search
MMRGYRPTPVSNSTLSFCGSDNSSAYKVDNGLLNNGCFLDALGVVPHVFLLFSTFPILFI
GWGSQSSKVHIHHSTWLHFPGHNFRWLLTTILLFVLVCEIAEGIVSDGFNQSRHLHLYMP
AGLAILAAITSIVYYHNIETSNFPKLLIALLIYWTLAFITKTIKFVKYDDHGIGLRQLRF
CITGLLALLYGLLLGVEVNVILQRRYMWFQYPTEVKPPDDLQDLGVRFLQPFVNLLSKST
YWWMNTFITSAHKRPINLKTIGKLPISMRALTNYQRLRKAFDAQMENGPVPLKGSRWIWR
ALRQAFGRPLVLSITFRFMADLLGFAGPLCISGIVHHISSDNHSVLPPVKLLGVHFISSE
AFLANAYVLAVLLFLALLLQRTFLQASYYVAIETGIKLRGAIQTKIYHKIMRLCTSNMSM
GDMTTAQICSLVARDTNHLMWFFFLCPNLWAMPVQIVIGVFLLYYLLGVSALIGATVITV
LAPLQYFVATRLSRAQKSTLEYTGERLKKTNELLRGIKLLKLYAWEHIFRSSVEETRRQE
LRNLRTFALYTSLSIFMNAAIPIAAVLTIFVVHVHVHSASDFNLSPAVAFGSLSLFHILV
TPLFLLSSVLHSTVKALVSVQKLSEFLGSTEIEIYHDPVVQTPANNNGNIKSVYALQLQA
KLVNRKSKAKQDVNRNFEQQDQELTALAAQDEDVCLKIINGYFTWTQGCPTLTNIDIKVP
FGQLTMIVGQVGCGKSSLLLAALGEMQKISGSITWNSLPKSDSEENVRAQYMSGKQLLRN
RGSVAYASQRPWLLNATVEENILFDMAPNEKRYKEVIEVCQLQPDIDTLPQGDQTVIGEK
GIILSGGQRQRISVARALYQQTNVVFLDDPFSALDIHLSDHLMHEGILKFLRQEKRTVVL
VTHKLQYLPHADWIIAMRDGTVQTQGTLKDIQCAEPELFEQWRTLMNRQNKENSTELKRK
SFRRAMYSRDTLATEDEDEDSSTTTDEDSLRAELRHRTTIPWSSFATYLRTAGLLLLPLL
VLSQLTKHSLMVAIDFWLAHWTSHVIAAQIESAESNCTATKDCEFSHSSYLQVFCVLCTL
GIILCLVTSLAVEWTGLRVAKELHCSLLRIIVLAPMRLFETTPLGNILNRFSTDTNTIDQ
HIPVTLECLSRSTLLCVSAVGVISYVTPLFLIALLPLAIACYFIQKYFRVASRDLQQLED
STEMPLLSHYSQTIEGLTTIRAFRHEQRFKKKLLERTDANNISSLFLMAANRWLEVRMEY
IGAFVVLIAAVASITNALYSQLSAGLVGLGLTYALMVSNYLNWIVRNLADMEVQLGCVKR
VSSLIHTQPENYDGLMTPAQVPAGWPKYGEIQIKNLSVRYDSSLKPVLRHVNAHIKPGQK
VGICGRTGSGKSSFSLALFRMVDTFEGQIFIDGIDIAKLPLQTLRSKFSIILQDPILFSG
TIRFNLDPERKATDQMLWEALEIAQLMPVVKGLPGGLDAMVTEGGENFSQGQRQLFCLAR
AFVRKTSILIMDEATASIDMATESILQKVVMTAFADRTVVTIAHRVHTILGSDVVIVMKH
GAILEYDEPDILLEQKDSVFSAFVRADK
NT seq
4767 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgaggatacagaccgactcctgtctccaactcaactctgtccttttgtggttct
gataactcttcagcgtataaggttgataatggccttttgaataatggctgctttttggat
gctctcggtgtcgtccctcatgtcttcttgctgtttagcaccttccccatcctcttcatc
ggttggggcagtcagagctctaaggttcacattcatcacagcacgtggcttcatttccct
ggtcataacttccgctggctgctcaccaccattctgctctttgtgctggtgtgtgagatc
gctgagggaatcgtgtcggacgggtttaatcagtcccgtcatctccacctctacatgccg
gcaggacttgctatactggctgccatcacatccatcgtctattaccataacatcgagacc
tccaacttccccaagctacttatagcattgctgatctattggactttggcctttatcacc
aaaaccatcaagtttgtgaagtatgacgatcacggcattggtcttaggcagctgcgtttc
tgcatcacaggactgctggcgcttctgtacggcctgctgctgggagtcgaggttaatgta
atactgcagaggcgctacatgtggtttcagtatcccacagaggtcaagccacctgatgac
ctccaggacctgggtgttcgcttcctgcagccgttcgtcaacctgctttcaaagagcaca
tactggtggatgaacaccttcatcacttccgcacacaagcggcccataaacctgaaaact
attggcaagctgcccatttccatgagagctcttaccaactaccaaaggctccgcaaggcc
tttgatgcacaaatggagaacggtcctgtcccgctgaagggctcccggtggatctggcgt
gccctgcgtcaggcgttcggcaggcctctggtgctcagcatcacgtttcgcttcatggct
gatctgctgggctttgctgggccactctgcatctctggaattgttcatcacatcagcagt
gacaatcacagcgttctgcctccggtgaagctgcttggagtgcacttcatttcctcagaa
gcattcttagcaaacgcgtatgttctggccgtactgctgtttctggcgctgctgctgcag
agaaccttcctacaggcatcttattatgtggccatcgagactggaatcaaactaagagga
gccattcagactaagatttatcataagatcatgcgtctgtgcacatctaacatgtctatg
ggtgacatgactacggctcagatctgcagtctagtggctcgagacacaaaccacctcatg
tggttcttctttctctgtcccaacctgtgggccatgccggttcagattgtgattggggtt
tttctgctgtattatctgctgggggtcagcgctctgatcggtgcgacggtcatcaccgtt
ttggctcctctgcagtattttgtggccacacggctctcacgggcacagaagagtacactg
gaatacaccggcgagagactgaagaaaaccaatgagctgctgaggggaatcaagctgctg
aagctgtacgcatgggagcacattttcagatccagcgtggaggaaacacgcagacaagag
ctgagaaacctgcgcacgtttgcgctctacacgtctctctccatcttcatgaatgctgcc
atcccaattgctgctgttctcacaatttttgtggttcatgtgcacgtgcacagcgcttca
gacttcaatctgtctcctgctgtggcgttcggctccctgtcgctcttccacatcctggtg
acgcccctcttcctgctctccagcgtcctgcactccaccgtcaaggctctcgtcagtgtg
cagaagctgagtgaatttcttggcagtactgagattgaaatctatcacgatcctgtagtc
caaactccagcaaacaacaacggcaacattaagtctgtgtatgcattacagctccaggct
aaactagtgaatcgtaagagtaaagccaaacaggacgtgaacaggaactttgagcagcag
gaccaggaactgacagcattagctgctcaggacgaggatgtgtgtttaaagattataaat
ggctacttcacatggacgcagggatgcccgactctgaccaatatcgacataaaggttcct
tttggtcagctgacgatgatcgtaggtcaggtggggtgtgggaaatcctctcttttactg
gctgcactgggagaaatgcagaagatttctggaagcatcacatggaacagtttacccaag
agtgattcagaagaaaacgtgagagcacagtatatgagtggaaaacagttgctcaggaac
agaggttcagtggcttacgcttcccagaggccttggctcttaaatgctacggttgaggag
aacatcttgtttgacatggcccccaatgagaagagatataaggaggtgattgaggtttgt
cagctacagccagatattgacacactgccacagggagaccagaccgtgattggagagaag
gggatcattctgtccggcggccagcgtcagcggatcagtgtggctcgagctctttatcag
cagactaatgtggttttcttggacgacccattttcagctctggacattcacctcagcgat
catctcatgcatgaaggaatcctcaagttccttcgacaggagaagaggactgttgtgttg
gtcactcacaagctgcagtatttacctcatgcagactggattatagccatgcgggacggg
acagtgcagacacaagggaccttaaaggacatccagtgtgccgaacctgaactgtttgaa
cagtggagaactctgatgaacagacagaacaaagagaactctacagaactgaagaggaag
agtttcaggcgggccatgtactctagagatactctggccaccgaggacgaggatgaagac
agctccaccaccactgatgaggacagcctcagggcagagctgcgtcacagaaccacaatt
ccctggagctccttcgcgacttacttgagaactgcaggtttgctgctgctgccgctgctc
gttctttctcagctcaccaaacactcgctgatggtcgccattgacttctggcttgcgcac
tggacgtcacacgtcatcgcagctcagatcgaaagtgcagagagtaactgcactgccaca
aaggactgtgagttcagtcactcgtcgtacctgcaggttttctgtgtgttgtgcactcta
ggaatcattctgtgtctcgtcacatctctggcggtggagtggacgggtttacgggtggcc
aaagagcttcactgcagcctcctgcgcatcatagtccttgcacccatgagattatttgag
acgactcctctggggaacattctaaaccgattctcaacggacaccaacacaatcgatcag
cacattccggtcactctggagtgtctgagccgctcgactctgctgtgtgtgtctgctgtg
ggcgtcatctcttatgtcacgccgctctttctcatcgctctgttgccattggccatcgcc
tgctacttcattcagaagtactttagggtggcatccagagatctgcagcagttggaggac
agcactgagatgccgctcctgtcccattactcacagaccatagagggcctcacaaccatt
agagcattcagacatgagcagaggtttaagaaaaaactgctggagcgcacagacgcaaat
aacatctcctccctcttcctgatggcagccaatcgttggctggaggttcgcatggaatac
attggggcatttgtggtgctgatagcagcagtagcatctataaccaatgctttatatagt
cagctctctgcaggactggtgggtctgggactcacttatgctctcatggtgtcaaactac
ctgaactggattgtgcgtaatctggcagacatggaggtgcagctgggctgtgtaaagaga
gtcagcagtctgatacacactcaaccagagaactacgacggactcatgactcctgctcag
gtccctgccggatggccaaagtatggagagatccagatcaagaacctgagcgttcggtac
gacagcagcctgaagcctgtcctgagacacgtcaatgctcacatcaaaccaggacagaag
gtgggaatatgtggaagaactggaagtggaaaatcgtctttttctctggctctcttcaga
atggtggacacgtttgagggacaaattttcattgatgggattgatattgctaagcttcct
ctacagactctacgatcaaagttttccattatcctgcaggatcccattttattcagtgga
acgattcggtttaatctggatccagagagaaaagccacagatcagatgctatgggaggct
cttgaaattgctcagctaatgccagttgttaaaggtttacctggaggactagatgccatg
gtgactgaaggaggagagaacttcagtcagggccagcggcagcttttctgtctcgcgcga
gccttcgtgaggaagaccagcatcctcattatggatgaagctacagcatctatcgacatg
gccacagaaagtattctgcagaaagtagtcatgacggcgtttgcagaccgaacagtggtt
acgatagcacatcgcgttcacactatcctgggctcagacgtggtgatcgtgatgaaacac
ggtgccatcttagaatacgatgaaccagacatcctgctggaacagaaggacagcgttttc
tctgcatttgtgcgagcagacaaataa
DBGET
integrated database retrieval system
