Labeo rohita (rohu): 127180728
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Entry
127180728 CDS
T09007
Symbol
dennd4a
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127180728 (dennd4a)
Membrane trafficking [BR:
lroh04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
127180728 (dennd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
CAS_CSE1
Motif
Other DBs
NCBI-GeneID:
127180728
NCBI-ProteinID:
XP_050990909
LinkDB
All DBs
Position
18:complement(12012989..12053970)
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AA seq
1719 aa
AA seq
DB search
MEDKSLRVADYFVVAGLTNSSKPLEEDIHPEDGGHRSSAQLKAPITDVAVVIRSLGEEVP
RGYTCVECTPSGLPAELNGGSLMGPQIFLCYRRGRDKPPLTDLGVLFEWKEKLKPDCQII
QTTPSGRPANISSSSSQRIYITYRRASENHSHTTLAVTDICVIIPGKGETPPHAFCKVDK
NLNSSMWGSSVYLCYKKSLAKTNTLAFKAGLLSRYPEEDYDSFPLPESVPLFCLPMGASI
ECWPSHTKYSLPVFSTFVLTGASGEKVYGAAIQFYEPYPEEHLTDKQRSQLGLQANGLRP
DGSMTVHTNKSICLLSHWPFFDAFRNFLTFLYRYSISGPHTLPIEKHISHFMHKVPFPSS
QRPRILVQLSPHDSLMLSQPVSSPLPLSGGRLSTLLLNLGPKNAVTLLVLAVTEHKILVH
SLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGVDSRYFDLYEPP
TDISCVDLDTNTITHKEERRSLTWKILPRKACKHLINTLSNLHQQLDEGYQMSREEGQME
AFMSEREPGSGGKSLETLELEIQEAFLRFMAAILKGYRSYLLPITQAPSEKATDASSLFD
LQGFLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKLFGTEKAGK
VDSDKPEDTRLIELDKSHRSEHTVYITPPELPALPEGEEPSMVYSYSGFPVLNAQLCELQ
DGPRVPKATSAKRHISPISPAAIFRRSQQEIKSAQRMAKTYSSIPQMWSKCLLRHCHGLW
FICLPAYVSACHSKVRALHTAYDVLRNMQDKKLQPPDEVCYRVLMQLCGQYGQPVLAVRV
LFEMKKAGVQPNAITYGYYNRAVLESTWPSSTRGGYFLWGKLRNVVRGVVLFKQVWRRQT
THPKDTHLSDASDLDSVSHGSLDSSNDSAERVSIDTDFTKMDSSDDRSSTGGQSDQGYDS
LSKEEVRLGGGEEQNSSPDMKEKKDRNSCTLSQTVLSKKEDSSLVVGIHPSATSGETSNV
FPQALPKTKRPSSLDIFGGKPIRPSTLDLTPDKTVEELSNESVPTLIETEAVGGVVSPPK
LAVERTVSCTVAMEKRVAMEKEHIGVERSVSCSSALGRVVKRTGIEAGFDPLSLIVAETQ
AHSEGDNPDTPTARRDLAEEIHHYMNNLSSPLSQRSLSVDLKGHQTPSPHSSPRMSAVLS
SPSTSQLQPQPRTRLFSSPSLPQGRMRKVREQRPTSLASPSSPTPSSSSFSMDSLLTPTL
DVFKSSFLSAGKGVAEKASRLYSRLSSQTSIAQDLNSDRVSVSSLGSGDPDCSSLIESDS
CVDPDALSSPQRDAAQPVTRPKRSPYRSNHCLESPSAPPRLYRQSSLNGPSLTVMKALQT
PDACSDSSFSQSMQNYAVEVRMSSCSRCNTCESLVYDEEIMAGWTADDSNLNSTCPFCGS
PFLPLLNVDIRNLGDQERSPSQDSHTCQTDTADELPQVYDATGSGKKDPEPVTVPYLSPL
VLWKELESLLENEGDQGISSAAIVDHHPIVFWNLVWFFRRLDLPSSLPGLYLSSKHYCRD
TQPLQNCASEDSKNVLVQILWDNPRLHQDPIKPCYLLWKSYCANPAVSEEEEQAVSLELL
QSVVKSIQRNDVYQPMSQILQLLGTRLGFVRQRSLYRDILFLSLVALGKSSISIDAFDRE
YKMAYDRLTPSQVKMTHNCDRPPSAGVMECRRTFGLPSL
NT seq
5160 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaaaagccttcgtgtagcagactattttgtggtggcaggactcaccaactca
tcgaagcccctggaggaagacatccaccctgaagatggtggtcatcggagctcagcccag
ctcaaggcgcccatcactgatgtggcggttgtgattcgttccctaggagaggaagtacct
cgagggtatacctgcgttgaatgcaccccctctggacttcctgctgaactgaatggggga
agcctcatggggccgcagatcttcctctgctataggagaggcagagacaaaccgccgctc
acagaccttggcgtgctctttgagtggaaggagaaactgaagccggactgtcaaattata
cagaccacgccctctggccgccccgctaatatcagtagctcctcctcccaaaggatctac
atcacatatcgacgtgcctctgagaatcactctcataccacgctggctgtcacagacatc
tgtgtcattattcctggcaagggagagacaccaccacatgctttctgcaaggtggacaag
aatctcaacagcagcatgtgggggtcctctgtgtatttgtgctacaaaaaatctttggcc
aagaccaacacgcttgcattcaaagcaggtcttttgtccagatacccagaggaggattat
gattcctttcctttgcctgaatccgtgcccctgttttgcctgccgatgggagcgtccatt
gagtgctggccctctcataccaaatattcacttcctgtcttttcaacattcgttctcact
ggcgcctctggagagaaggtttacggtgccgccatccagttctatgagccctatccagag
gaacatttgactgacaaacagcgatctcagctgggcctgcaggcaaacgggctcaggcct
gacggatcaatgactgtccacaccaacaaaagcatctgcctgctctctcactggcccttt
tttgatgctttccgtaacttcctgaccttcctctacagatattccatctcaggtccacac
actctgcccatcgaaaagcatatttcccatttcatgcacaaggttcctttcccttcctca
caaaggccacgtatccttgtgcagctgtctccacatgatagcctgatgctgagccagcct
gtttcctctccactccctctgagtggtggaaggctctctacactgctgttgaacctcggc
ccaaagaatgcagtgactttattggtgttggctgtgactgaacataagatcctagtgcac
tccttacgtccggccgttcttaccagcgttaccgaggccctggtgtcgatgatttttccc
ttccactggccgtgcccgtacattcctctctgcccgctggctctggcagatgtgctcagt
gctccatgcccgttcattgtaggggtggactcgcggtactttgacctctatgagccaccg
acagacataagctgtgtggacctggacaccaacactataactcacaaagaagaacgcaga
tccctgacctggaagatcctgccaagaaaagcctgtaaacatttgatcaacaccctcagc
aatctccaccagcaactggatgagggttatcagatgagccgtgaggaaggacagatggag
gctttcatgagcgagcgggaacctggcagtggtgggaaaagtctggaaaccttggagctg
gagatccaggaggctttcctgcgcttcatggcggccatcttgaaaggctaccgttcatac
ctgttgcccatcacacaggctccgtctgaaaaagcaactgatgccagttcactctttgat
ctgcaaggctttttgaagagtcgtgatcgatcccatcagaagttttactcgctcatgacc
aagactcagatgttcattcgtttcatcgaagagtgctcttttgtcagcgataaggatgca
agccttgctttctttgatgactgtgttgacaagttgttcggtacggagaaagcggggaag
gtggacagcgataagccagaagacacaaggcttattgaacttgacaaatcgcaccgcagc
gagcacacggtctacatcactcctccagagctgccagcacttccagaaggcgaagagcca
tctatggtttatagctacagtggattcccggtactgaacgcccaactctgtgagcttcag
gatggccccagagtccccaaagcaacatcagccaagagacacatcagtcccatcagccca
gctgccatattcaggcgctcccaacaggagatcaaatcagcccagaggatggcgaagacg
tactcctccatcccacagatgtggtccaagtgtctgctcaggcattgtcacggcctgtgg
ttcatctgcctccccgcttatgtcagcgcttgccattctaaggtgcgagcgctgcatact
gcgtacgacgtgctgagaaacatgcaggacaaaaagttgcagccccctgatgaggtgtgt
tatcgggtcctgatgcagctgtgtgggcagtatggacagcctgttcttgccgtccgagtt
ctttttgaaatgaagaaagccggagtgcagcctaatgccattacctatggatactacaac
agggccgttctggagagcacatggccgtcctccaccagagggggatacttcctgtgggga
aagctgagaaatgtggtccggggtgtggtgctgttcaaacaagtatggaggaggcagacc
acccacccgaaagacacccatctctctgatgccagtgatctcgacagcgtcagccacggc
agtctggacagctctaacgattcggcggagcgagtttccattgatacagacttcactaaa
atggattccagtgatgacagatccagcacaggtggtcagtctgatcagggctatgattct
ctgtctaaagaggaggtaaggttaggaggaggtgaggagcagaactcctctccagacatg
aaggagaagaaggacagaaactcttgcacattgtctcagactgtactctcaaagaaagag
gattcatctcttgtggttggaatccatccatctgcaaccagcggggaaaccagtaatgtc
tttcctcaagcccttccaaagacaaaaaggccaagctctctggatattttcggaggaaag
cccataaggccaagcacgctggacctaaccccggataagacagtagaagaactcagcaat
gaatctgttccaacattgatagaaacggaagcagtggggggcgtcgtgagcccacctaaa
cttgccgtcgagaggactgttagctgcacagttgccatggagaaaagagttgccatggag
aaggagcatatcggcgtggagaggagcgtgagctgcagcagcgctcttggacgagtggtt
aaaaggacaggtatcgaagcagggtttgatcctctgtccctcatagtggctgagactcaa
gcccacagtgagggcgataatccagacaccccaaccgcccgccgagacctggctgaagag
attcatcactacatgaacaacctgagcagcccgttaagccagcgttctctcagtgtggac
ctgaaggggcatcagactccgtcccctcacagctctccccgcatgtccgcagtgctcagc
tcccccagcacgtcccaactccagcctcagccacgaacaagactgttctcatcgccctcc
ctccctcagggccgtatgcgcaaggtcagggagcagcggcccacctccctcgcctcccct
tcctcacctactccctcctcttcctcgttctccatggactctctgctcaccccgacacta
gatgtgttcaaaagcagcttcctctctgctgggaagggcgttgctgagaaagccagccga
ctgtattcgcgactttcctcccagacgtccattgcccaggacctgaactctgaccgggtc
agtgtgtcctctctggggtccggtgaccctgattgctcttctctgattgagagcgattcc
tgtgtagaccccgatgcgctctcctccccacagcgggatgccgctcagcccgtcacacgt
cccaaaaggagcccgtataggagcaaccactgcctagaaagcccatctgcaccacctaga
ctctaccgccagtcttcactcaatggtccttcactgacagtaatgaaagctctgcagacc
ccagacgcctgttctgattccagcttttctcaatccatgcagaactacgcagttgaagta
cgtatgtccagttgttcacgctgtaacacctgtgagagtttggtgtatgatgaagagatc
atggctggttggacagctgacgattctaacctcaatagcacgtgtcctttttgcggctct
ccgtttctgcctctgctcaatgtggacatcagaaacctgggtgaccaggaaagatccccc
tctcaagattcacacacttgccagacagacactgcagatgaattaccacaagtttatgat
gccactggcagtggcaaaaaagaccctgagccagtaacagtgccctacttgagtcctctg
gtactttggaaggaactggaaagcttgctggagaacgagggggaccagggcatctcatct
gcagccattgtggatcaccatcccattgtgttctggaatctggtgtggtttttccgtagg
ctggatctgcccagcagtctgccaggcctctatttgagctccaaacactactgcagagat
actcagcctttgcaaaactgtgcatcagaagacagtaagaatgtcttagtacagatcctg
tgggacaaccccagactgcatcaggaccccatcaagccctgctacttgctctggaaatca
tattgtgcaaatcctgcagtatctgaggaggaggaacaggctgtgagcctagagctgctg
cagagcgtcgtgaagagcatccagaggaacgacgtctaccagcccatgagtcagatactg
cagcttctgggcaccagactgggcttcgtcagacaacggagcttatatagagatatcctg
ttcctgtctttggtggctttggggaagagtagcataagtatcgatgcattcgaccgtgaa
tacaaaatggcatatgaccgtttgacacccagccaggtcaagatgacccacaattgtgac
cgtccacccagcgctggagtcatggaatgcaggaggacctttgggctgcccagtctctga
DBGET
integrated database retrieval system
