Labeo rohita (rohu): 127180730
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Entry
127180730 CDS
T09007
Symbol
slc24a1
Name
(RefSeq) sodium/potassium/calcium exchanger 1 isoform X1
KO
K13749
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
127180730 (slc24a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lroh02000
]
127180730 (slc24a1)
Transporters [BR:
lroh02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
127180730 (slc24a1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Na_Ca_ex
BUD22
Motif
Other DBs
NCBI-GeneID:
127180730
NCBI-ProteinID:
XP_050990916
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All DBs
Position
18:11994379..12012504
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AA seq
715 aa
AA seq
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MFLTRRKRLHLSRIIFLLSGVFLCSLYQLTIRARLPEPWSEPQTGEKPEDVSELGSGMLD
TTVISQSSNHTDGVQSSEPATNVPVSKMSRTETPATTTNRTFTQCIFVNPDLPKPTPVPT
PATDTTTVVPNTTESRPGEAPHIKGEYPEDIFSIEDRRRGWVILHIFGMVYMFVSLAIVC
DEFFVPTLGVITDKLEISDDVAGATFMAAGGSAPELFTSLIGVFISHSNVGIGTIVGSAV
FNILFVIGMCALFSREMLHLTWWPLFRDVSFYILDLIMLIIFFLDNTIMWWESMMLVCGY
ATYVFFMKYNVQIEQAFKSQLRRHKNIVKVIAVEEPEKDNGASGEENRPPEPEDKNRLKL
KPTLQRGGSSASLHNSTMRNTIFQLMIHTLDPLGEVKFKDKAQILNDMARGKVENKKKEK
SGEGDDQTEHSKDSKDAAPGAKDEDGSQKSEAQKEGDFAAEGGSEKPGGSDGSGEDDDDS
DEDSDEDSDEDSDDDDDENEDEAGEEGENEEPLSLEWPDTRRKQATYLFLLPIVFPLWLT
VPDVRNPASKKFFVITFLGSIVWIAIFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSI
PDLITSVIVARKGLGDMAVSSSVGSNIFDITMGLPVPWLMYSFCHSLAPVPVSSNGLFCA
IVLLFLMLLFVIISIAACKWRMNKVLGFIMFILYFVFLVLSVMLEDRIIICPVSI
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgactcgaagaaaaagacttcatcttagccggataatatttcttctgtctggg
gttttcctttgctctttatatcaactcactataagagccagactaccagaaccctggtct
gagcctcagacaggagaaaaacctgaggatgtttctgaacttggttctggaatgttggat
acgacagtgatttcgcagagctccaaccacacagatggggtccagtcgtcagaaccagcg
acaaatgtacccgtctcaaaaatgtctagaacagagacacctgcaacaaccacaaacagg
acattcacccaatgcatctttgtgaatccagaccttccaaaacccaccccagttcctact
ccagcaaccgatacgaccactgtggtgcccaacactacagagtccagacctggagaagca
ccgcacataaagggcgagtacccggaggacatcttctccatagaggatcgacgcagaggc
tgggtcattctccacatctttggaatggtatacatgttcgtgtctttggccatcgtctgc
gatgagtttttcgtccctacgttgggggttatcacagacaaactggagatctcagatgac
gtggccggagcgacgttcatggccgctggaggctctgcccccgaactcttcacttccttg
atcggggtcttcatttctcatagcaatgtgggcattggaaccatcgttggctcggctgtc
ttcaacatcctgtttgtgatcggaatgtgtgcgctgttttcccgggagatgctgcacctc
acttggtggcctctctttcgggatgtgtcgttctacatcctcgatctcatcatgcttatc
atcttctttttggacaacaccattatgtggtgggagagtatgatgctggtgtgcggatat
gctacctatgttttcttcatgaagtacaatgttcagatagagcaagcctttaagtcccag
ctcaggagacacaagaacatcgtcaaagttatcgcagtcgaagaacctgagaaggacaat
ggggcctcaggtgaagagaacaggccgcctgaaccagaagacaagaatcgattaaagctg
aagcccacactgcagcgcgggggcagttctgcctctctgcacaacagcaccatgaggaac
accatcttccagctgatgattcacacactagatcctcttggagaggtgaaatttaaagac
aaggctcagattttgaacgacatggcccggggaaaagtagagaacaaaaagaaggaaaaa
tctggtgaaggtgacgatcaaacggagcattccaaggattccaaagacgctgctccggga
gccaaggatgaagatggtagtcaaaagtctgaggcacaaaaggaaggagactttgcagca
gaaggaggttcagagaagccaggaggttcagatggttcaggggaggatgatgatgacagt
gatgaagacagtgatgaagatagtgatgaggacagtgatgatgatgatgatgaaaatgag
gatgaggctggggaggaaggagaaaatgaagaacctctgtccttagagtggccagacact
agacgtaaacaggccacgtatttgtttctgttgcccattgtctttccactttggctgaca
gttccagacgtcagaaaccctgcatccaagaagttctttgtcattactttccttggctca
atagtatggattgctatattttcctatcttatggtgtggtgggcacatcaggttggtgag
actattggcatctctgaggaaatcatgggtcttaccattctggctgcaggaacatccatt
cctgatctcatcaccagcgtgattgtggctcgaaaaggcttgggagacatggctgtctca
agctctgtaggcagcaacatatttgacatcaccatggggctgccggtgccctggctgatg
tactcattctgccattcgctggcgccggtgcccgtgagcagtaacgggctgttctgtgcc
attgtgctgctcttcctcatgctcctcttcgtcattatctccatcgctgcctgtaagtgg
aggatgaataaagtgttgggattcatcatgttcatcctctactttgtgttcctggtgctc
agtgtcatgctagaggatcgaattattatatgccccgtgtccatctga
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