Labeo rohita (rohu): 127180763
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Entry
127180763 CDS
T09007
Symbol
caprin1b
Name
(RefSeq) caprin-1b isoform X1
KO
K18743
caprin-1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127180763 (caprin1b)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
127180763 (caprin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
127180763
NCBI-ProteinID:
XP_050990996
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All DBs
Position
18:17486588..17501362
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AA seq
692 aa
AA seq
DB search
MPSATNGTRTLKSASPDLGSAPGSMNQITATNQLTGTQSEAMKQVLVVLEKKVRNMEKKK
SKLDDYQARNRSGERLNQDQLEALSKYQEVTHNLEFARELHKSFLALGQEIQKSVKKAAR
REQLLREEAEQKRLKRVLELQFLLDRLGDESVRQELLQGAGGPLLLTESDLTSLDEFYKL
VGPERDQNIRLTDQYQEASQHLWELLEGKDKPVAGTTYKALNEMLERVLQSGYFDRVQSH
QNGVCTEEEEQTAAVEVSEAEEHPPDTEVEVTEEYAEPIAIEVTEFVNRQFVMESTYSTG
EKEQREEWSAETEVVNSMQPVQTTPTPVVPEPHPLTTVTPTPPSDPVVRQQVVQDLMAQM
QGPYNFMQDSMLDFDGQSLDPAIVSAQPMKPAGMEMPPMVCQPAHPESRLAQPPTVGVQP
EPTQIPMVSPSPETFSTPPPIYQSSHAADPRPQTDSIDPIQASMPLTEQPPPSTALSPAS
QTQVIQPGSKPLHSSGINVNAAPFQSMQTVFNLNAPVPPGNDTDSMKQASQYQNSYSQGF
NSQTQQHPVEQTDMPPEQLQSVVGAFHSQDQSLPNSTGPQPMSQQPGGQGNGFNRQTQSF
YNSRGISRGGPRNSRGMINGYRGPSNGFRGGYDGYRPPFSNSANSGYGQTQFSSPRDYSN
SNYQRDYQQNYKRGAGQGARGVSRGNAQVMRP
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgccctcggcaacaaatggcaccaggactctgaagtctgccagcccagacttgggatct
gctcccggatcaatgaaccaaatcacagccaccaaccagctgactggaacccaatcagag
gccatgaagcaagtgctggtggttcttgaaaagaaagtgcgcaatatggaaaagaaaaag
agcaagcttgatgactatcaggccagaaaccgcagtggggaacgtcttaaccaggaccag
ctggaagccctgtctaagtaccaggaagtaacccataaccttgagtttgcacgagagctg
cataagagctttttggcattgggtcaagaaattcagaagagtgttaagaaagcggcacgt
cgcgagcaactcctgcgtgaagaggcggaacagaaaaggctgaaacgggttttggagctg
cagttccttctcgaccgacttggggatgaaagtgtgcggcaagagctactacaaggagcc
ggaggacctttgctgcttaccgagagtgaccttacttccttggatgagttttacaagctt
gtggggcctgaacgtgaccaaaacatcagattgactgaccagtatcaagaagcatcgcag
cacttatgggaacttttggaggggaaggacaagcctgtagcaggaacaacatataaagca
ctgaatgaaatgttggagcgggttttgcagagcggctactttgacagagtgcagtctcat
cagaacggagtttgcacagaggaagaggagcagacggctgcagtggaagtgtctgaagct
gaggagcaccctcccgacacggaggttgaagtaacggaagagtatgcagaacctattgca
attgaggtgacagagtttgtaaataggcagtttgttatggagagcacatacagtactggc
gaaaaggagcaaagagaggaatggagtgcggagactgaggtggttaactccatgcagccg
gttcagaccacccccacccctgtcgtcccagagccccatcctctgaccacggtaactccg
acacccccttcagaccctgtggttagacagcaggtggttcaggatctcatggcacagatg
cagggaccatacaatttcatgcaggactccatgcttgattttgatgggcagtctcttgat
ccggctattgtatcggcgcaacccatgaagccggctggtatggagatgccaccgatggtt
tgtcaaccagctcacccagagtctcgcctcgcccagcctcccactgttggcgttcagcct
gaacccacacaaatccccatggtctctccatcaccagaaaccttttccacaccgcctcct
atatatcagtcttctcatgcagctgatccccgaccacagacagactccattgatcctatt
caggcctcaatgcccctgacagagcaaccacctccatctacggcgctctctcctgcctcc
cagacccaggtgatccagcccggatccaaacccttgcacagcagtggcataaatgtcaac
gccgccccattccagtccatgcaaacggtgttcaaccttaatgcgcctgtcccaccaggt
aatgatacggactcaatgaaacaggccagccaataccagaatagctacagccagggtttt
aatagccagacgcagcagcaccctgtggagcaaacagacatgccgccagagcagctccag
tctgtagttggtgccttccattctcaagaccagtcactccctaattccactggtcctcag
ccaatgtcccagcagccaggtggccagggcaacgggttcaaccggcagactcagtctttc
tacaacagcagagggatttctcgtggaggtcctcgtaactcacgtggtatgatcaatggc
tacagaggaccatctaatggtttcagaggaggatatgatggttatcgcccacccttctcc
aactctgcaaactctggatatggacaaacccaattcagttcgccgcgggactattccaac
agcaactatcagcgggactatcaacagaactataaacgaggtgctggccaaggtgctcga
ggggtctctcgaggaaacgctcaagtcatgcgaccttaa
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