Labeo rohita (rohu): 127180893
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Entry
127180893 CDS
T09007
Symbol
cntn5
Name
(RefSeq) LOW QUALITY PROTEIN: contactin-5
KO
K06761
contactin 3/4/5/6
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lroh04515
]
127180893 (cntn5)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lroh00537
]
127180893 (cntn5)
Cell adhesion molecules [BR:
lroh04515
]
Immunoglobulin superfamily
Contactins
127180893 (cntn5)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lroh00537
]
Others
127180893 (cntn5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
Ig_C17orf99
Ig_5
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_6
Pur_ac_phosph_N
Sp38
Interfer-bind
PKD
Motif
Other DBs
NCBI-GeneID:
127180893
NCBI-ProteinID:
XP_050991225
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All DBs
Position
18:31133436..31450037
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AA seq
1092 aa
AA seq
DB search
MGSPWKPLLLLSVISGLADFARAVAGRPVSYAAVLRMKADSSSSSSLNSRMRLRNNHGVG
SSSQDWPPFARHRYSALSSQEDYRSEESEEFGPVFIQEPDDAIFSLDSDDKKVIMNCEAR
GNPVPTYSWLINGTIVDAEADFRYSLIDGNLIIHNASEATDYGRYQCRAENSIGTVLSRD
ALLQFAYLGAFSGRTRGAVSVREGQGVVLMCAPPPHSPEIIYSWVFNELPSFVAEDSRRF
ISQETGNLYISKVQTSDVGSYVCQVKNTVTNARVLSPPTPLTLKTDGVMGEYEPKIEAHF
PQTVLAAKGVTVRLECFALGNPVPTITWRKMSGNIPKKARLRKSQAVLEIPNIQLEDSGS
YECKAENTRGGTAFRGHLQVYTLPQWISMINDTQLDSGEQLHWECRATGKPRPTYRWLRN
GEPLNSQSRVEMVNGELIIHRLQQADSGMYQCIAENKYGAIYSSAELKILASAPTFSTNP
VRLIATVGKDVSLECRPRASPKPRISWRKNDKRVQPSRRIMLLRNNTLRIINSSRSDEGS
YVCRAENQFGSAELTTVLLVKEPMRVELTPRRVEVTVGESVVLSCKVTHDPSLDVSFLWL
LNNQPLNTQQEGGHFEYIQTQSSTADLMIRSILLKHAGKYGCRAQTSADSVLAEAELLVR
GPPGPPGVVIVEEITDTTATLSWSHGVDNHSPITTYNVQARSPVSLGWQTVKTDPDPVTG
NMESAMAVELNPWVEYEFRVVATNGIGTGDPSTPSRAVRTKEAVPSVAPANVRGGNGRRH
ELVISWEPVSEEFQNGEGFGYIVAFRANGTRGWKEKMVTSADSTTYKYRDETFPPLTPFE
VRVGVYNNKGDGPFSEVVTVFSAEGEPREPPSEVQAFAISSSEIKVMWKPPNPGPGRPQG
YEVSFWKDMEQEETGKKKRTTGNETTMLLTGLDGNTQYLVSVKGFNSVGQGPASSPIKIS
TKKNAPSLPPGNLMWIQEGNNVSLSWDPVKARDNESDVIGYKVLLRQEGRGHSQVMRTPN
SAVVLTLPEGGTYIIEVRAVSEGGEGAASAQVRVLTSSGVRAKSGQLSVQKLPPGLAWTA
LFLSLMVPSFPL
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atggggtcaccatggaaaccacttctcctgctgtcagttatcagcggcctagcagatttt
gctagagccgttgctgggagaccggtgtcatacgctgcagtgctgcggatgaaggcagac
agttcctcgtcctcctcgctcaactccaggatgaggttaagaaacaaccatggagttgga
tcgtctagccaggactggcctcccttcgccagacacagatactcagctctcagctcgcag
gaggactacaggagcgaagagagcgaagagttcggtccagtgttcattcaagagccagat
gatgcaatcttctccctggattcagatgataaaaaagtgataatgaattgtgaagcccga
ggaaaccctgttccgacctacagttggttgatcaacggaaccattgtggacgcagaagca
gatttccgctacagtctgattgatgggaatctaataatacacaatgcaagcgaggccact
gattatgggagataccagtgtagagcagaaaacagcattggcaccgtcctgagtcgagat
gccctcctacaatttgcctatctcggggcgttcagcggacggacgagaggagctgtttcg
gtgagggaaggccaaggtgttgtgctgatgtgtgccccccctcctcattcgccagagatc
atctacagctgggtgttcaatgagcttccctcgttcgtggcagaggacagccggcgattc
atctcgcaggaaacgggaaatctgtatatctcaaaggtgcagacctcggacgtgggcagc
tacgtgtgccaagtgaagaacactgtgaccaacgccagggtcctgagcccaccgacgcct
ctgactctcaaaacagatggagtgatgggggagtacgagcccaaaattgaagcgcatttt
ccccagacggtactggcagccaaaggcgtcacagtgaggctggagtgctttgcccttggg
aatcctgtccccactatcacctggagaaagatgagtgggaacatccccaaaaaagcccgt
ctgcgcaaatcacaggctgttctcgagatccccaacatccagctagaggattctgggagt
tacgagtgtaaagctgagaacacaagaggaggcactgcgttcagaggacacctacaggtc
tacactctgccgcagtggatcagcatgataaatgacactcaactggacagcggagagcag
ctccattgggagtgtcgagccacaggaaagcccaggcccacatatcgctggctgcgcaat
ggagagcctctcaactcacagagcagagtggaaatggtgaatggggagcttatcattcac
agactgcagcaggctgattcgggaatgtaccagtgcatcgcagagaacaagtatggagcc
atctactccagcgcagagctcaaaatactggcgtcagctcccacattcagcaccaaccct
gtccggctcatcgcgaccgttgggaaagacgtgtctctggagtgccgacctcgtgcgtcg
cccaaacccagaatctcgtggaggaaaaatgataaaagagtccagcccagccgaaggatc
atgttgcttcggaacaacaccctccgcatcattaactccagccgctcagatgagggaagc
tacgtgtgccgtgcagaaaaccagttcggttcagcggagttgacgaccgtgcttctggta
aaagagcccatgcgggtggagctgaccccccgtcgggtggaggtgacggtgggagagagt
gtggtgctcagttgtaaagtcactcatgacccctcgctggacgtgtccttcctctggctg
ctcaacaaccaaccactcaacacccagcaggagggcggtcactttgagtacattcagaca
cagtcctccacagcagacctgatgatcaggagcatcctcctgaagcatgctgggaaatat
ggctgtcgtgctcagacgagtgcagacagtgtgcttgcagaagccgagctgctagttaga
ggccctcctggacctcctggagtggtgattgtagaggagatcacggataccactgcgacg
ttgtcatggagccatggcgttgacaaccacagtccaatcaccacctacaatgtacaggca
cgtagccctgtctctctgggctggcaaactgtgaaaaccgatccagacccagtgacagga
aacatggagtccgccatggcagtggagctcaacccctgggtggagtatgagtttcgggtg
gtggccacgaacggcataggcacaggcgacccgagcaccccctccagagcggtccgcact
aaggaagcagttccgtcagtagcccctgccaacgtgagaggggggaacggccgcaggcat
gagctggtcatatcctgggagcccgtctctgaagaattccaaaatggagaaggttttggt
tacatcgtggcattccgagccaacggcacacgtgggtggaaagagaaaatggtaacctcg
gcggactccaccacctataaatacagagacgagaccttcccccctctcaccccgtttgag
gtgagggtgggggtgtataacaacaaaggagacgggcccttcagcgaggtggttactgtg
ttctctgcagagggagagcccagggagcctccttcagaagtgcaggcgttcgccatctcc
tcctctgaaattaaagtcatgtggaagccgcccaatcctggtcctggaagaccccaggga
tatgaggtgagcttttggaaggacatggagcaggaggagacggggaagaagaagaggacg
acagggaatgagacgaccatgctgctgacggggctggacggaaacacgcagtatctggtc
tctgtgaagggattcaacagtgtcggtcaaggaccagccagctcacccatcaagatcagc
actaagaaaaatgccccaagtcttcccccaggcaatctgatgtggattcaggagggaaac
aatgtttctctatcctgggatccagtgaaagcaagggacaatgagtcagatgtcattggg
tataaggtattattgcgtcaagagggtcgaggccacagccaagtcatgaggactccaaac
tcagctgtcgtcctgacgctacccgaggggggaacgtatatcatcgaggtgcgcgcagtc
agtgaaggaggtgaaggagccgccagtgctcaggtcagagtgctcacctcctcaggagtg
cgtgcaaagagtgggcagctctctgtccagaaactgcctccaggcttggcatggactgct
cttttcctgtcattaatggtgccttcttttcccttgtga
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