Labeo rohita (rohu): 127180918
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Entry
127180918 CDS
T09007
Symbol
carmil2
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 2 isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127180918 (carmil2)
Membrane trafficking [BR:
lroh04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
127180918 (carmil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
DUF3915
Spectrin_5
Motif
Other DBs
NCBI-GeneID:
127180918
NCBI-ProteinID:
XP_050991270
LinkDB
All DBs
Position
18:14043983..14103511
Genome browser
AA seq
1663 aa
AA seq
DB search
MAAQTEVPFCLKECITKYLKPQRVQFMSLVQLNQCKGRAENRVLVMSQWRAHVFHSKQPV
KVESSFSYLEIYAIIIDSIEQVVIETDRQIYSLSLMSVRDLEAVVTHVTASLKKIFPDSS
PGKLLKKVPPDLQERLCSLASRVEEHVNGAVGPCGGFSDTYAALCDFNEFPCCVEVQWDV
DNIYHVQNCRVFNLIDFSHLDSRDLALAVGALSFNQWFTKICSKDFKLTPDVQEQVLYMI
ARSSALEEVSLEASGLKMDFAVKMASAFRDSSASAVHIINLSVNAIEDKGVIALSQSLSK
LPRGLSQLYLSKVSMSPKGLGCLVQVLHQSTSLCNTLTHLDLSGNIGCLATEEAVSLCKF
LSAPNAVSHLDLSYTDCPLDTLFVSLSVGCCTTLSYLNLSRNTFSHRKVREVTRSVRDFF
SKSTVLKYVGLAGTKLPPEALRLLLQGLATNTHLSELELDISCCELRSAGAQVIQEHIFE
AKAICSLDLSDNGFESNMVTLILSIGRSHSIRHLSIGRNFAMKSKALTDVLHRLVQLIQE
EECPLESLSVCDSKLKTGTTILINSLGSNASLSKIDISGNCIGDTGAKMLAKALMINTKL
KTLVWDRNNVTAGGLMDVANAMEKNLTLQNMSIPMSDVLQAYRNTPEKMEEALQKIQTFL
QRNNQRQCGTGEDMCHLQHGLKTTRSEQLVQDLCKKLQESVHPLTCYNIQEVQSDILLAE
EALQHAKTAISSFGGLYELGRAPSSGHMLKCILNDAATALRSEITEEIQELATAMLQSAQ
LTCPRVVQRSSVSEHLADCVAKKTRQAAHFIQNTMQETENSIRNKLSELKLSVSVSLVES
IIDEVLQDLSVAQEKLDKHMREFSQSTNIKASVPQLRVMEHEFPVDDYVPVIWRNSFHSR
SIRPAPSIKSLLDVEGEQQARAATHPQQEVEERGGGGPQVSRVGMEERRRALSLSLATGL
SVTLAGQLKPGSSSYSGREADAAAAPAAAAAALSNREPRRSEPAPPQPPMDLPIEGHTLR
HYTRSRPRPNRRNRQPPSKPQEQAAESENEANENMGRVDEGVEEFFTKKIIPDDPLKHQR
EEPLIKAQPAEPTSVTTAPPTTSTTTPIPTTAPSKNIKKKFGDFFAFKKVRAGRGAKGDG
VPEGKAKKTSIADLIRPLREAARAEKEREKEREREKEKEREKDKEKERDKEKLDEENVVK
AATTTATTTTILTITDSTTTAPVIEDKMSPRAPSPAPTPVLTPPASTPTPPASSPSKTEE
VPALSPAAPPTPTKTPSPVPVVSPSEREKSRTLEKSRTPDGERRPKPIRRSLREGKSQSL
ILLSDVLPEQDGTATQAKKHASESSSSFEQRLHVMLHRMGVTKTSPTDTKQSQSKDEELR
KANSEGAILDKPEPPPTFMKPRTMSTSSDTRRPTRVPQSVTDFHRTERPLLPERPIGPLP
PKPAMKPILLPGSEAARTATPSPKLPSPSQDGQAEVSETQPQEKEPPTPSPRKETPPAPS
PRRILRTDIRERSERAQSVTEETLPIPRPRMKPSPQRRAVSVHEDSLLQHAAMLDPEELK
AALPRRQRSPGRKRVNLGDLTPCSEDLPEGEEVKSGEKEDGTGQVDETDSTTVTYSQSEQ
SPSGLSEQVTNQERGETVSEEHTTQGETSDQRTESPSPETHMD
NT seq
4992 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcaaacagaggtcccgttttgcctcaaagaatgcataactaagtatttgaaa
ccacaaagggttcagtttatgagtttggtgcagcttaaccagtgcaagggacgagcagag
aacagagttttggtgatgtctcaatggagagctcatgtgttccatagcaagcagccagtg
aaggtggagagttctttcagctatttagagatctatgccatcatcatcgacagtatcgag
caggtggttattgagacggacagacagatctactctcttagcctgatgtcagtgcgagat
ctggaagctgtggtcacccatgtcaccgcctcgctcaagaagatctttcctgattcatcg
ccagggaagttgctgaagaaagttccccctgatctccaagagcggctatgcagtcttgcc
tccagagttgaagaacatgtgaatggagcagttggaccatgtggaggcttttcagacact
tacgcagctttgtgtgacttcaatgagttcccatgctgtgtggaagttcagtgggacgtt
gataacatttaccatgttcagaactgccgggttttcaacctcatagacttcagtcatttg
gacagcagagacttggctttagcagtgggcgctctgtctttcaaccagtggttcaccaag
atatgtagcaaggactttaaactgacccctgatgtgcaggaacaggtcctatatatgatc
gcccgctcctctgctctggaggaggtcagtctggaagccagcggacttaaaatggatttt
gctgttaagatggccagcgcttttcgggacagttctgcctctgctgtccatatcatcaac
ctctctgtcaatgctattgaggataaaggtgtgattgctctcagtcagagtttgagcaaa
ttgccgcgtggcctcagtcagctgtacctctccaaggtctctatgtccccgaaaggcctg
ggctgtctggttcaagttcttcatcaaagtacatctctctgtaacactctcacacaccta
gacctgagcggaaacatcggctgcctggcgacagaagaggccgtgagcctttgtaagttc
ctatctgctccaaatgcagtttctcacctggacctcagctacacagactgccctctagac
acgctgttcgtgtctctgtctgtgggctgctgcactactctgagctacctcaacctctcc
aggaacactttttctcataggaaagtacgagaggtcacgcgcagtgtgagggatttcttc
agcaagagcactgtgctaaaatacgtgggattggctggaacgaaactacctccagaagct
ctcagattgttactacagggcttggccaccaacactcatctatctgagctggagcttgac
atcagctgctgtgagctgaggtcggctggagctcaggtgattcaggaacacatctttgag
gccaaggccatctgcagtctggacctgtctgacaacggttttgagagcaatatggttact
ttaattctctccattggccgcagccactctattcggcacctttcaattggacgcaatttt
gccatgaagtctaaagctcttacagatgtgttacaccgccttgtacagctaattcaagag
gaggagtgtccattggagtctctctctgtatgtgactcgaagttaaaaactggtaccacc
atcctcatcaacagtctgggcagcaacgccagcctatccaagattgatatcagcggaaac
tgtataggagacacaggagcaaagatgctagcaaaggccctcatgatcaacaccaagcta
aaaacactggtttgggatcggaacaatgtgactgctggaggattaatggatgtggccaat
gccatggaaaaaaacttgacactacagaacatgtccattccaatgagtgatgttcttcaa
gcgtaccgaaacaccccggagaagatggaagaggctttacagaaaatccagactttttta
cagaggaacaatcagagacagtgtggaacaggtgaggatatgtgtcatctgcagcatgga
ttgaagaccactcgctctgaacagttagttcaggatctctgcaagaaactacaagaaagt
gtgcatcctttaacctgctataatatacaagaggtgcagtcggacatcttgcttgcagag
gaagcacttcaacatgcaaagacggccattagttcttttggaggactctatgagttgggc
agagcgccctctagtggtcacatgcttaaatgcattctcaatgacgctgctacagccttg
aggagtgagatcactgaggaaatccaggaactggcaacagcgatgctgcagtccgcccag
ctgacctgccccagagtcgtccagaggtcgagtgtcagcgagcatctggcagattgtgtg
gccaagaagacccgtcaggctgcacactttattcaaaacacaatgcaagagacagagaat
agcatcagaaacaagctcagtgaactgaaactctccgtcagtgtctctctggtggaaagc
ataattgatgaagttcttcaggatttgtcggtggctcaggaaaagctggacaagcacatg
agggagttttcccagtccaccaatatcaaggccagtgttcctcagctcagagtgatggag
catgaattccctgtggatgattatgtccctgtcatctggaggaacagcttccactcccgt
agcatccgtcccgccccttccatcaaaagtttgttagatgtggaaggggaacagcaggcg
cgtgcggccacacatccccagcaggaggtagaggagagaggagggggagggcctcaggtc
tccagggtaggaatggaggagaggaggcgggccctgtcgttgtcattggcgacggggctg
tcagtcaccctggcaggccagctgaagccaggaagctcctcctactctgggagagaggcg
gatgctgctgccgctcccgctgctgctgctgccgctcttagcaacagagagccccggcgc
tcggagcctgcacctcctcagccccctatggacctgcccatcgaaggccacacactgagg
cactacacccgctccaggcccagacccaaccgccggaacaggcagcctcccagcaagccg
caggagcaggcagctgagagcgagaatgaggccaatgagaacatggggagggttgatgaa
ggtgtagaagagttcttcaccaaaaaaatcatccctgatgaccccctaaagcaccagagg
gaggagcccctcattaaagcacaacctgcagagcccacgtctgtcacaactgcccctcct
accacctccactacaacccccatccccaccacagccccttccaaaaacattaagaagaaa
tttggtgactttttcgcctttaagaaagtccgagcaggtcgaggggccaagggcgacggc
gttcctgagggcaaggccaaaaagacttccatagcagatcttatccgtccactccgggag
gcggcacgtgcagaaaaagagcgagaaaaggaaagggaaagagaaaaggagaaggagcga
gagaaggacaaagaaaaggagagggacaaagagaaactggatgaggaaaatgtagtcaag
gcagccacaaccacggccaccaccaccaccatcctcaccatcacagattccacaacaact
gcaccagttattgaggacaaaatgtcacccagagctccttcacctgcccccacacctgta
ctgaccccacctgcatccactcccacacctcccgcctcctccccgagcaaaaccgaagag
gtcccagcactgtcccctgctgcacctcccactcccaccaaaacccccagcccagtccca
gttgtgtcaccctcagagcgggagaagagccggaccttggagaagagccgcaccccagat
ggagaacggaggcccaaacccatccgtcgctctctcagagagggcaaatcgcagtccctc
atcctgctctcagacgtcttgccagagcaggacggcacagccacgcaagctaagaaacat
gcctcagagagctcgtccagctttgaacaacgtctccatgtcatgcttcaccgcatggga
gtcaccaaaacatctcctactgacaccaaacagagccagagcaaggatgaggagctgagg
aaagccaactctgagggggcgatacttgacaaacctgagccaccgccaacatttatgaaa
ccccgcacaatgtccacctcatcagacaccaggcggccaacccgagtaccccagagtgtt
acggacttccaccgtacagaaaggccactacttccagagcgtcccataggcccgttgccc
cctaaaccggccatgaagcccattctacttcctggtagtgaggcagcacggacggccaca
cccagtcccaagcttcccagcccctctcaggatggtcaggcagaggtttccgagacccaa
cctcaggagaaagagcctccaaccccatctccccgtaaagagacgcccccagctccctca
ccacggaggattctgagaacggatatcagagagcgttcagagagagcacaatccgtcact
gaagagaccctccctataccaaggccccgcatgaagccctctccccagcgccgtgccgtg
tctgtccacgaggactctctcctccaacacgccgccatgcttgaccctgaggagctaaag
gctgcgctgccaagacggcagaggtcaccggggcggaagagagtgaacctgggagatctg
acgccctgctcagaggatttaccagagggtgaggaagtgaaatctggggagaaggaagat
ggcactggacaggtcgatgagacggacagcacaacagtcacatacagccaatcagagcag
agcccatccgggctcagcgagcaagtgaccaaccaggagaggggggagacagtctcagag
gagcacacaacgcagggagaaacatcagaccaaagaactgaatccccctcacctgagaca
cacatggactga
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integrated database retrieval system
