Labeo rohita (rohu): 127181019
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Entry
127181019 CDS
T09007
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127181019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lroh03021
]
127181019
03036 Chromosome and associated proteins [BR:
lroh03036
]
127181019
Transcription machinery [BR:
lroh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127181019
Coactivators
SAGA/TFTC/STAGA complex
127181019
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
127181019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
127181019
NCBI-ProteinID:
XP_050991445
LinkDB
All DBs
Position
18:complement(1592614..1706350)
Genome browser
AA seq
905 aa
AA seq
DB search
MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLVGQSEPPAAQPENARPGSAKQQQQQQAG
GTAQLPAPVDSPSEPQQQAQQQQNARKAARNPDSDPKDVSLDKHAKALEKESPLKSHGGS
IIIITTAAAAAASDAPAPGNKGESPRDTRKKHPGNTRTLRSAASHSLNGNGGGAASASPG
TSSPSGTTFTVSSNPQAIALDRGTPTIALHRLPRHIIASIAQNGNGTSVSALVQQGARIA
ATGAQVNHSKPPADASGNNAKPQATSAPPAAAATAPVKPAVSVSAAPVIRPAQTQPPAQQ
RVVTPQLIVRPPQQQTTIQLPPGFTIPPGMVLVRTEMGQLVMVPQQALAQAQAQNSISPR
PSTPTSVATFRVTTPQSPVSTQAIRPAPAAQTKLVQSSSPSAAAQTSTAAGPAKAPVAAA
VAVTAPQQVQPALGPQGPLTQMPLAPQSAAAPAPGASVVSQEMQENVKKCKNFLATLIKL
ASHNSPSPETSRNVKALVQDLLDAKIDPEEFTSRLQSELKSSPQPYLVPFLKKSLPALRL
SLLNSQQSLTQPLQPNKTSVTPVQTGVSVRPHQPNSTTVLPQGIKRAAGPGSQIRMPVVI
TQTVRATGTLGKPVAIQTGKSPAGVTIQLSGNQKNKLNDPGGGSFRDDDDINDVASMAGV
NLNEESARILATNSDLVGTQIRSCKDEAFLPTGLLHRRILETAKRFGVTDVPLEAVNFIS
HATQSRLRTVLEKVSSIAQHRMDSCKEDEWYEQSSDVRSQLKFFEQLERMEKQRKDERER
EILLRAAKSRSRQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKVDSP
GATTTGTEVSGSSAGSPAGSTAPSSSSRQYNRQRITRVNLRDFIFYMEQERETSRSLLLY
RALLK
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccctctggaagacatgctcttctccgaggtggacgagaaagcc
gtgagcgatctagtgggctcgctggagtctcagctggtgggccagagcgagccgcccgcc
gcgcagcccgaaaacgcacgcccgggcagcgcgaagcagcagcagcagcagcaggcagga
ggaacagcgcagctgcctgctcctgtagactctccatcagaaccacaacaacaagcacag
cagcagcagaacgcacggaaagctgcgcgcaacccggattccgacccgaaagacgtcagc
ctggataagcacgccaaagccctggagaaggagagccctctgaagtcacatggaggcagc
atcatcatcatcactacggctgcggcggcagcagcatccgacgctcctgcaccgggcaac
aaaggtgagagcccgagggacacccgcaagaagcacccggggaatacgcgcacgctgcgc
tccgcagcatcccacagtctcaacggcaacggaggcggcgcagcatcagcatcacccggc
acctccagcccgagcggcacgactttcaccgtgtccagcaacccgcaggcgatcgcgctg
gaccgcgggacgcccaccatcgcgctgcacagactcccgcgtcacatcatcgccagcatc
gcgcagaatggaaacggcacgtccgtgtccgcgctggtccaacagggcgctcggatcgca
gcgacgggcgcgcaggtcaaccacagcaaaccacccgcggacgcgtccgggaacaacgcg
aaaccccaggcgacctctgcgccacccgcggcggccgcaacagcgcctgtcaaacccgct
gtcagtgtcagtgcggctccggtcatcagacctgcgcagacgcagccgcctgcgcagcag
agggtcgtaaccccgcagttgattgtcagaccgccgcaacaacaaactaccatacagctg
ccgcccggattcaccatcccaccaggtatggttctggtccggacggagatgggtcagcta
gtgatggttcctcagcaggctctggctcaagctcaggcccagaacagcatctcaccgcgg
ccctctacgcccaccagcgtggccacattcagggtcacgaccccacagtctcctgttagc
actcaggcgattcgtcccgctcctgcggctcaaaccaaactggtccagtctagttcaccg
agcgccgcggcccagaccagcaccgcagccggccccgctaaggcccccgtggcagccgcc
gtggcagtgacagctccccagcaggtccagccggccttgggcccccaggggcccctcact
cagatgccactggccccgcagagcgcagccgccccggcccctggagcttcggttgtctcc
caggaaatgcaggagaatgtgaagaagtgcaagaacttcttggcgacgttgatcaagttg
gcgtcccataattccccatccccagagacgtctcgaaacgtgaaagcgctggtgcaggat
ttactggatgcgaagatcgatccggaggagttcaccagccggctacaatccgagctgaag
tcgtctccgcagccgtacctggttcctttcctgaagaaaagtctccctgcgttgcgtctg
tctctcctgaacagccagcagtctctcactcagcctctgcagcccaacaaaaccagcgtg
acgccggtccagacgggagtgagtgtgcggccacaccagcccaacagcaccaccgtactg
ccacaaggtatcaagagggcagcgggtcctggcagccagatacggatgcctgtggtcatc
acgcagactgtgcgagcgacaggtactttagggaagcctgtggctatccagacgggcaaa
agcccagcgggcgtcaccatacagctctcaggaaaccagaaaaacaagctgaatgacccg
gggggaggctccttcagagacgacgatgacattaacgatgtggcatctatggccggcgtg
aacctcaacgaggagagcgctcgtattctagcgaccaactccgatcttgtgggaacgcag
atccggtcctgtaaagacgaggcttttctgccgacaggtctattacaccggcgaatactg
gaaacagctaagaggtttggagtgacggacgtaccgctggaggctgtgaacttcatctct
cacgctacgcagtccagattacggacggtgctggagaaagtttcctccatcgcgcagcac
agaatggactcgtgtaaggaagacgagtggtacgagcagtcgtctgatgtgcgctcgcag
ctcaagtttttcgagcagttggaacgcatggaaaagcagaggaaagatgagcgagaacga
gagattctcctcagagcagcgaagagtcgctcgcggcaagaagatccagaacaagcccgt
ctgaagcagaaagcaaaggagatgcagcagcaggaactcgcccaaatgagacaacgagac
gccaacctgacggcactcgccgccatcggccctcggaaaaaacgcaaagtagactcgcca
ggagctacaacgacaggcactgaggtgtcggggagttcggcaggttctccggccggatcg
acggccccgtccagctcgtcacggcagtataaccgccagagaataacacgcgtcaacctc
agggacttcatcttttacatggagcaagagagagagaccagcagatctctgttactgtac
cgcgctctcctgaagtag
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