Labeo rohita (rohu): 127181080
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Entry
127181080 CDS
T09007
Symbol
lrrc4bb
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127181080 (lrrc4bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lroh04515
]
127181080 (lrrc4bb)
Cell adhesion molecules [BR:
lroh04515
]
Immunoglobulin superfamily
NGL family
127181080 (lrrc4bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_9
LRR_14
V-set
LRRNT
Ig_2
Ig_6
Motif
Other DBs
NCBI-GeneID:
127181080
NCBI-ProteinID:
XP_050991542
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All DBs
Position
18:complement(22773790..22780584)
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AA seq
724 aa
AA seq
DB search
MQAAMVTGFFSPSPLIWLVQLLLWPHLLGPRLAEASPACPAPCSCSNQASRVICTRKGLN
EVPQSISSNTRYLNLQENSIQVIRSDTFKHLNHLEILQLSKNQIRQIEVGAFNGLPNLIT
LELFDNRLPLVPSQAFEYLSKLRELWLRNNPIETLPAYAFHRVPSLRRLDLGELRKLSFI
SEAAFEGLLNLRFLNLGMCGLKDVPNLTPLVRLEELELSGNQLGVVRPGSFQGLVSLRKL
WLMHSRISVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQQLERVHLNHNPWVCNCD
VLWLSWWLKETVPDNSTCCARCHAPPGTKGRYIGDLDQRDFTCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWLTPNGTLMTHGAYKVRISVLHDGTLNFTNVTMQDTGPYTCMV
TNSAGNTTATAVLNVSASDPGNGYSYFTTVTVETVEPGQESHGSARQFVNETLISFPAPT
AASTSAGPTGSMLSSLSPRATRAPDRPFTVSITDVANMTGLEDVMKTTKIIIGCFVAITF
MAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDEIGSAGGASGITGGGTVHTGAGSGG
GGGQSPRNHDPEIMTLPSVGQADHLNHYYKAHHFNNNVLGLNMASGMLNNKPNPSSQNQA
STLKMGTSGDPSNPGSISPPLPIPIPMAMTFHGTLKGLSHVPNVQTEPLLLSNGSKESVQ
ETQI
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctgctatggtaacaggctttttcagcccctcccccctcatctggttggtccaa
ctgttgttgtggccacacctcctcggacctagattggccgaagccagtcccgcctgccct
gctccctgtagctgttccaatcaagccagccgagtgatttgtactagaaaaggcttaaat
gaagttcctcagagtatctcgtccaatactcgatacctcaacctccaggagaactccata
caggtgatcaggtcagacaccttcaagcacctaaaccatctggaaattttacagctgtct
aagaaccagattcgtcagatagaagtgggagctttcaatggccttcccaatcttatcacc
ctggagctttttgacaacagactaccactggtaccatcacaggcgtttgagtacctgagc
aagctgcgtgaactctggttaaggaacaaccccatagagacactcccagcgtacgccttc
caccgcgtgccgtcgctgcggcggttagacctcggtgagctgcgcaagctcagtttcatc
tcggaggctgcgttcgaagggttgctgaacctacgtttcctgaatctggggatgtgcggg
cttaaggatgtacccaacttgacccctctcgtgcggctagaggaactggagctgtcggga
aaccaactgggagtggtgcgtcctggatctttccaaggcctagtgtctctacgcaagctg
tggctcatgcactctcggatctctgtcattgagaggaacgccttcgatgacctcaagaac
ctggaggagctcaacctgtcccataactctctgcattcgctgcctcacgatctcttcacc
ccgctgcagcagttagagcgggtccatctgaaccataacccttgggtttgcaactgtgac
gttctgtggttgagctggtggcttaaagaaactgttccagataactccacttgctgtgca
cgctgccatgccccaccggggactaagggaaggtacatcggtgacctcgaccagcgagac
ttcacctgctacgcacctgtgattgtagagccacccaccgacctgaacgtgaccgaggga
atggcggcggagctcaaatgccgcaccgggacgtccatgacgtccgttaactggttgacc
cccaacggaaccttgatgacccatggagcgtacaaagtccgaatctcggtcctgcatgac
ggaaccctgaatttcactaacgtgaccatgcaagatacaggaccctacacttgtatggtc
actaactccgctggaaacaccacagcaactgctgtgctgaacgtttccgcgtctgaccca
ggcaacggctacagctacttcacaaccgtcaccgttgaaaccgtagagcccgggcaagaa
agccacggttcggcacggcagttcgtcaacgagacgttaattagttttccagcgccgacg
gccgcatccacgtcagcgggtccaactggttcgatgctgtcctccttgtcgcccagagcc
actcgtgcacccgaccgcccattcacggtctccatcacggacgtcgccaacatgacaggt
cttgaggacgtaatgaagacgaccaagatcatcatcggctgctttgtggccatcactttc
atggcggccgtgatgctggtcgtcttctacaagcttcgcaagcagcaccaactgcacaaa
caccacgggccggcacgcgccatcgagatcatcaacgtggaagatgagattggatctgcc
ggcggagctagcggcatcacgggagggggcaccgtccacacgggagcagggtctggcgga
ggaggcggacagagtccgcggaatcacgaccccgagatcatgacgctcccgagcgtcggg
caagcggaccacctgaaccactactataaagcgcaccactttaacaacaacgtgttgggc
ttgaacatggcctccggaatgctcaacaacaaacccaacccttcctcgcaaaatcaggct
tcgaccttgaaaatggggacttccggcgacccctccaaccctggctcgatctcgcctccc
ctgccaattcccatcccaatggcgatgactttccacgggactctgaaaggccttagccac
gttcccaacgtgcagactgagccactgttgctatcgaacggctccaaggagagcgttcag
gagacccagatctga
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