KEGG   Labeo rohita (rohu): 127181094
Entry
127181094         CDS       T09007                                 
Symbol
aptx
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    127181094 (aptx)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lroh03400]
    127181094 (aptx)
Enzymes [BR:lroh01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     127181094 (aptx)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     127181094 (aptx)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     127181094 (aptx)
DNA repair and recombination proteins [BR:lroh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     127181094 (aptx)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     127181094 (aptx)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT
Other DBs
NCBI-GeneID: 127181094
NCBI-ProteinID: XP_050991960
LinkDB
Position
1:15902413..15907506
AA seq 369 aa
MPVCLLVSEDDAHKPIQLHHQQSVILGRGPETKIKDKKCSRDQVELKADCNRGFITVKQL
GVNPTNVDNVVVGKGNQAVLHRLLVLTSYKPHVAHLYNQVTIKPGQKLYMVNQMYPYTVK
FVEDTSTPRSATELSKPLKRAHQMSSEGNGEKIKSPANKTSTSHTDHHRMSDDSPPPKKT
PPSGSDKSESAGHWSQGLKVSMQDPKMQVYKDDRVVVIKDKYPKARYHWLVLPWDSISSL
KALRSEHIELLKHMQRVGDQMVQQCPDAHKLSFRLGYHAIPSMSHVHLHVISQDFDSPCL
KNKKHWNSFTTDYFVESQDVIAMLEHDGKVTVKEGTSELLKLPLRCHLCRKEQPTIPKLK
EHLKTHLPS
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgcctgtgtgcttactagtaagtgaagatgatgcacataaacccattcagcttcatcat
caacaatccgtgattcttggtcgaggaccagaaactaagataaaagacaaaaagtgctca
agagaccaagttgaattgaaagctgattgcaacagaggatttatcactgttaaacagctg
ggtgtgaatcctacaaatgtggacaatgtggttgtgggcaaaggcaatcaggctgtattg
cacaggttactggtcttaacttcctacaaaccacatgtcgcccacctctacaatcaggtg
accataaagccgggccagaaactttacatggtcaatcagatgtatccttacacagtgaag
ttcgttgaggacacgtccacacccagatctgccacagagttgagcaaacctttaaaaaga
gcccatcagatgagctctgaggggaacggagagaagatcaagagccctgcaaacaaaaca
tcaacatcacatacagaccatcacagaatgtcagacgattcacctccgccaaaaaagaca
ccgccatctggatctgataaatcagaatctgctggccattggagccaagggcttaaagtg
tcaatgcaggaccctaaaatgcaggtgtacaaagatgatagggttgtggtcatcaaggac
aagtacccaaaggcgcggtaccactggctggtgctgccgtgggactcgatctccagtctg
aaggctcttcgctcggagcacatcgagctgctcaaacacatgcagcgtgtgggagatcag
atggtgcagcagtgtcctgatgctcacaaactgagctttcgtctgggatatcacgccatc
cccagcatgagtcacgtccacctgcacgtaatcagccaagactttgactcgccatgtttg
aagaacaagaaacactggaattccttcactactgactactttgtggagtctcaagatgtc
attgcgatgctggagcatgatgggaaagtgacggtgaaagaaggcactagtgaattactg
aagctgcctctgcgctgtcacttgtgtcgtaaagagcagccgacgatacccaaactaaaa
gagcatctcaaaactcatctgccttcttag

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