Labeo rohita (rohu): 127181155
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Entry
127181155 CDS
T09007
Symbol
chrnb4
Name
(RefSeq) neuronal acetylcholine receptor subunit beta-4
KO
K04815
nicotinic acetylcholine receptor beta-4
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04080
Neuroactive ligand-receptor interaction
lroh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127181155 (chrnb4)
04082 Neuroactive ligand signaling
127181155 (chrnb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lroh04040
]
127181155 (chrnb4)
Ion channels [BR:
lroh04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
127181155 (chrnb4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF2417
DUF454
Motif
Other DBs
NCBI-GeneID:
127181155
NCBI-ProteinID:
XP_050991660
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Position
18:complement(24770199..24782486)
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AA seq
527 aa
AA seq
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MTRALTVLVCIFTLIRSGVCADSEERLMNWLLGKERYNKLIRPAVNRTERVTVLLQVSLA
QLISVNEREQIMTTNVWLTQNWNDYRLSWDPAEYEGIDKLRIPSRHIWLPDIVLYNNADG
TYEVTVFTNAIVLFNGSIAWLPPAIYKSACKIEVKHFPFDQQNCTLKFRSWTYDHTEIDL
VLKSEVASMDDFTPSGEWDILALPGRRTVSALDPTYVDLTYDFIIKRKPLFYTINLIIPC
VLITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLIGKYLMFTM
VLVTFSIITSVCVLNVHHRSPSTHSMPDWVKLVFLVKLPALLFMQRPRGNSARQRLRQKR
CLQDPGSLLGLAAPRKSAMSSSASALLAASSASALSSPGHFYNKGPQIEFNYSSRKGDLR
PAEFLPNGHNSTQDLRGNRAAPVWGSEVQEAVDGVRYVADHMMGNDDDQSVIEDWKYVAM
VVDRLFLWIFVIVCVVGTLGLFLQPLFQNQTAAIQQPSTEPSRRDGM
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcgcgctcaccgttctcgtttgcatatttaccctcatccgaagtggagtctgt
gcggactcagaagagcgtctgatgaactggctgctgggtaaggagcgttataataagctg
atcagaccggcggttaacaggaccgagagagtgacggttctcctgcaggtttctctggcg
cagctcatcagtgtgaatgaaagggaacagatcatgacaacaaacgtctggctcactcag
aactggaatgattatcgactgtcgtgggacccggcagagtacgagggaatcgacaagctc
cggatcccctctagacacatctggctgcctgatatagtgctgtacaacaatgctgatgga
acgtatgaggtcacagtcttcaccaacgccattgtcctgtttaatgggagcatcgcctgg
cttcctcctgccatttacaagagcgcctgtaagattgaggtcaaacactttccttttgac
cagcaaaactgcactctgaagttccgctcctggacgtacgatcacactgagatcgatctg
gtgctgaagtccgaggtggccagcatggacgacttcacgcccagtggcgagtgggacatc
ctggctctgccgggcaggaggacggtcagcgctttggaccccacctacgtggacctgaca
tatgacttcattatcaagcgcaagccactcttctacaccatcaacctgatcatcccttgc
gtccttatcacttcgctggccatcctggtcttctacctgccgtcggactgtggcgagaag
atgacgctgtgcatctctgtcctgctggcgctcactgtcttcctcctgttgatctccaag
atcgtgcctcccacatccctggacgttcctctgataggaaagtacctgatgttcaccatg
gtgctggtgacgttctctatcatcacgagtgtatgcgtattgaacgttcaccatcgctct
ccgagcacacacagcatgccggactgggtcaagctggtgttcctggtcaaactcccagca
ctgctgttcatgcagagaccacgtggaaactcagcccgtcaacgtctgcggcagaagcgc
tgtctgcaggaccccggatctctgctgggcctcgcagctcctcgcaaatctgccatgtcg
tcatctgcctctgcgctactggctgcatcctcagcttcggctctctcgtcaccgggacat
ttttacaacaagggacctcagatcgagttcaactacagctctcggaaaggagatctgcgg
cccgcagaattcctgcccaatggacacaactcaacacaggacctgagagggaacagggcg
gctccagtctggggatctgaggttcaggaggccgtggatggcgttcgctatgtagctgat
cacatgatgggaaatgatgacgatcaaagtgtcatcgaggactggaagtatgtggccatg
gtggtggatcgcttatttctgtggatctttgtgattgtgtgtgtggtgggaacactgggt
ctgttcctccagccgctcttccagaaccagactgctgccatccagcagcccagcacggag
ccatccagacgggatgggatgtga
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