Labeo rohita (rohu): 127181290
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Entry
127181290 CDS
T09007
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03013
Nucleocytoplasmic transport
lroh03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127181290 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
127181290 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127181290 (nup153)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127181290 (nup153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
127181290
NCBI-ProteinID:
XP_050991914
LinkDB
All DBs
Position
19:complement(20422767..20439087)
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AA seq
1451 aa
AA seq
DB search
MAATGGGKIRSRRYHIASKPYAKGKQQPGLISRVTDTVKSIVPSWLQKYFKNGEVPEGDA
SAVGVDRNNVAPPPNGNDEVAPLPDGRDSPEPSTSNTEPSTSRASLNFQEALSRPPLNRT
HLHFSTLDGSPALGGASSLFSQPSTSTAPFSGSPFAVTSNFSLVKEIKDSSSQHEDDNIS
TTSGFSSRASDKDVPTSKTVPLLWSPETERTHSGSQTAHSGLKKPTFNLSVFGTSSSSVL
NSSVLNSSQLGDSPFYPGKTTYGGAAAMRTARSRPATPYQPPVRRQIKAKPAGAQPCGVT
SATARRILQSLERMSSPLADAKRIPSTVSSPLSTSLNHTDLDVSNFQAKRKRLEPSVPPV
QKLVVPAAAAVSGNRSISFRPSLTPGGVNRGVEKNNRETPVRQSPPISDPAQAPSASTSS
LSYPLSSTPSTSSSGSGGGKMKRERAIRPSSKRPDDEVAEEPDLPPASLPSNFTLPTFSF
STPPPTTSLTSRTTPLTTVSEEPTANKEPAAPSTPPSVPFTFSSPIVKATAASPPSFSPS
SGFTFSAPTMKTGPSYSNGKIVPTVAPVKSVASEEKEFEGPFKPAKVLKQGSVLDLLKGP
GFASPAQNSVDKPLLSASTSSAPLSGFGDKFKPPAGSWNCGTCLLQNKSSDKKCVACLTP
QPNTDSASKSDSKPTEAPASISSLFAPPPGSWDCDTCLVRNKPDVVKCVACDTAKPGTGV
KSSLTLPALSEASSTLSATSSTTTTTTTASSVTGLLGFGDKFKKPEGSWDCDVCMVQNKA
QDVKCVACQSSKPGAVATAVSTPASAPASTAAPLLGFGDKFKKPEGSWDCEVCCVQNKAE
DQKCVACQSAKPGAKIESKGFSSSFGIQSNNTDSSSSFKFGTGSVDSTSAGLKFGGTFTD
ATLARGDFKFGFGSSNFSSDSADFSFGGLSTDRDSDKVERGSASSESTATKESVSKGFTL
GGSTDSLNKKTKSQDSSAGFKFGGSGGITFSSQASGSENSAFLFGAKPGEKGSSNSSFSF
SVSQPKAEKDDAPAASTTTTTTTAAAANFIPVFGKSLVAESSAPKFGEPSTKETSTSTFT
FGKTEEKKDTSAPSSAFLFGASKEADKPTPNLSFSFGEPDPPKDFPKTTITFGKPAESAE
PPKPSFSFGQSMTDTSAPKPSFGFMANSSSTPASSSSTPSLFGTPTTSSLAPTPAPSSTF
VFGQSTSSEHTMAKTFVFGQQPQDSQPAPPAAPSAAPAPAQPFQFGSGTNSSTPAFTFGG
ATSSTPASAAPAPAPAPPANPSPFVFSSATPSSGFGSGQTPIFGQSASQPTAPAFGSAAP
SFSVNASPASAFGAKPNSGPVFGQQANPAPTFGSAASSTGQGGFQFGSTGGFGASGSNNS
VFAFGAGSAAPATPAASPAMPALNPPSGGGFSFGQAPSFNIGSGKSSFNATPSVQNSIAG
RKIKTAVRRRK
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacaggaggagggaaaatcagatcaagaagatatcacatcgcttcaaaacct
tatgccaaaggcaaacagcagcctggcctgatcagtcgagtgacagatacagtgaagagc
atagttccctcctggctgcagaaatacttcaaaaatggagaagttccagagggtgatgcc
agtgcagttggggtggaccggaacaacgtggctcctccacccaatggcaacgacgaagtc
gccccgctcccagatgggcgagactctccagagccaagcacaagtaacacagaaccgtct
acaagcagagcgtcgctgaacttccaggaagctctgtcgagacccccgctcaatcggacc
cacctgcacttctccaccctggatggctcccctgcattaggcggtgcaagctccctcttc
tcccagccctccacatccacagcacccttctcagggagcccttttgctgtaacctccaac
ttctccctggtgaaagagattaaggactccagctctcagcatgaggatgacaacatctcg
actaccagtggcttttcgtcacgtgcatctgataaagatgtgcccacgtcaaagactgtg
ccgctcctctggtctccagagacggaacgcacccactctggatcacagacagcccactct
gggctcaagaaaccaaccttcaacctgtcagtctttggcacttcctcatcatcagtgttg
aacagttcagtgctgaactccagtcagttgggggattcacccttctacccagggaagacc
acgtatggaggagctgctgcgatgagaacagctcgttcacgcccagctacaccttaccag
cctcccgttaggagacagataaaggcgaagccagctggagctcaaccttgtggagtgacc
agtgccactgcgagacgcatcctacagtccctggagcgcatgtccagtcctcttgctgat
gcaaaaagaattccatctacagtttcatcacctctgtcaacttcactgaatcacacagac
cttgacgtttcaaatttccaggctaagaggaaaaggctggagccgtcagtccctcctgtg
cagaagctggtggtccctgcagctgctgcagtgtctggtaaccgctcaatatcctttaga
ccatcgctcaccccaggtggagtgaacagaggagtggagaaaaacaacagggagaccccg
gttagacaatctcctcccatttcagatcctgcccaggctccctctgccagcacaagcagt
ttatcctaccccttgtccagcaccccatcgaccagcagctctggttcaggagggggcaaa
atgaagcgggaaagagccattagaccttcctccaaaagacctgatgatgaggttgctgag
gaaccagacctgccgcctgcctctcttcccagcaatttcactttgccaacatttagtttc
tccactcctccccccaccacttcactcacctccagaacaacaccactcacaactgtctct
gaggaaccgacagcaaataaggagccagctgcaccatccacaccaccatctgtccccttc
acgttctcttcgcctatcgtcaaggcaacagctgccagtcctccatctttttctccatca
tctggattcactttcagtgcacctactatgaaaacgggcccctcttactccaatgggaaa
attgttccaacagtagcaccagtcaaatcagtggccagtgaagaaaaggagtttgaagga
cccttcaaacctgccaaggtcttaaaacagggcagtgtgttggatttacttaagggacct
ggatttgcgtccccggctcagaactcagttgataaacctttgctgtctgcatcaacatcg
tctgcacctctttctggttttggtgataagtttaaaccacctgcagggtcatggaactgt
ggcacatgcctattacaaaacaagtcctcggacaaaaagtgtgtggcatgtctcacacca
caacccaacacagactctgcctctaaatcggacagtaaacccacagaagctcctgcaagc
atcagttccctctttgctcctccacctggtagctgggactgtgacacatgtttagtcagg
aacaaaccagacgtagttaaatgtgttgcttgtgacacagccaagcctgggactggagtg
aaatctagtctgactctaccagctctttctgaggcctcatccaccctctctgccacctct
tctacaaccaccacaacaacaaccgcttcttcagtaactggactgttaggttttggggac
aaatttaagaagccagaagggtcttgggattgtgatgtatgcatggttcaaaacaaggca
caggatgtgaaatgtgtagcctgtcagagctctaaaccaggagctgtagccacagcagtc
tcgactccagcctctgcacctgcaagcactgctgcgcctttgttaggattcggggataag
ttcaagaaacctgaggggagctgggactgtgaggtgtgctgtgttcagaataaggcagag
gaccagaagtgtgtggcttgccagtcagcaaaaccaggagctaaaatagagtccaaaggt
tttagttcatcttttggcattcagtccaacaacacagactcaagttccagttttaagttt
ggtaccggctctgtggactcgacctctgctggcctgaagtttggaggcactttcacagat
gctactttggccagaggagattttaaatttggatttggttcgtctaatttctcctcagat
tcagcggacttctcatttggaggcttatccacggacagagattctgataaggtcgaacgt
ggtagtgcctcgtcagaatccacagcaacaaaagagagcgtgtcaaagggttttacactt
ggtggttccacggactcacttaataaaaagactaaatctcaggattctagtgcaggattt
aaatttggtggcagtggtggaatcactttcagctctcaagcttctggctctgaaaactct
gcatttttgtttggagctaaacccggtgagaagggaagctcaaattcatcttttagtttc
tctgtgtcccagcccaaagctgagaaagatgatgctcctgctgcttcgaccaccacaaca
acaacaacggcggcggcagcgaatttcattcctgtttttggcaagtctttagtagctgaa
tcttctgcaccgaagtttggggaaccatcaacgaaagagacgtccacgtccacattcacc
ttcggaaaaacggaagagaaaaaggacacctctgcgccctccagtgcattcttattcggt
gcttccaaggaagctgacaaaccgacaccaaacttgagcttctctttcggtgagccggac
cctccaaaagatttccccaagacaacaattacgtttgggaaacctgcagagtcagcagaa
cccccaaaaccatcatttagttttggacaaagcatgactgacacatctgctccaaagccc
tcttttggcttcatggccaactcctcaagcaccccagcttcctccagctccacccccagc
cttttcggcactcccactacctcttccctggctcccacacctgctccctccagtaccttt
gtatttggccagagtacctcctctgaacataccatggcaaagactttcgtgtttggacag
cagccgcaggacagccagccggcacctcctgcggctccttctgctgcacctgccccagca
caacctttccagtttggctcgggcacaaactcatccacccctgcttttacttttggtggt
gctacatcctccaccccagcctctgccgctccagctccagctccagctccacctgccaac
ccttccccatttgtcttcagttctgccacaccttcatctggctttggatctggacagacc
cccatctttggacaaagtgcgtctcaacccactgctcctgcatttgggtcagcagcacct
tcattctcagtcaatgcatccccagcttcggcattcggagccaagcccaattctggccct
gtattcggtcagcaggccaaccctgcacctacatttggatctgctgcttcctccacaggc
caaggaggcttccagtttggaagcactggtggatttggagcgtcagggagcaacaacagt
gtgtttgcctttggggccggatcagcagctccagctactcctgctgccagtcctgccatg
cctgctttaaatccgccctctggtggcggcttcagctttggtcaggccccttcttttaac
attgggtcaggaaaaagttctttcaacgcaacaccatctgtgcagaactcgatcgctgga
cgcaaaatcaaaactgctgttcgacgcaggaagtaa
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