Labeo rohita (rohu): 127181331
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Entry
127181331 CDS
T09007
Symbol
irx1b
Name
(RefSeq) iroquois-class homeodomain protein IRX-1b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127181331 (irx1b)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
127181331 (irx1b)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
127181331
NCBI-ProteinID:
XP_050991965
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Position
19:complement(8796586..8799484)
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AA seq
445 aa
AA seq
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MSFPQLGYPQFLNASQEVYGAERTAVMPSSPREGSSENSANPATAAAAITPMLGMYANPW
TVQNYSAFLPYNSAELALLSQMGSQYELKDNPGAHPPGFAVHAAPGFYPYGQYQYGDPAR
AKSATRETTSTLKAWLQEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK
VTWGRSAEDRDGRIFDSDNEDDADKNDDEEEIDLETIDMDKPEEPRGDQNKESSDNQHER
ENMETPRILSSPALKNTDSPVSSSNKEQSVVKSVGEVSPGGPVCQRPGNSKPKIWSLAET
ATSPDNAQKLGVSSTPAGLRASPSTHPAFLSTNGIYTCQIGKLHNWASAAFLSANSLMGV
RSLLSQNSNFPNHSPVTNPEKKPSSASGSPCLDSDNSSDSFSPKHNDQENVQRIESPTLA
SRPPFPVIHDRSHHETSQRALKTIS
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcccccagctgggttacccacagttcctaaacgcctcccaagaggtgtacgga
gcggagcgcaccgctgtcatgccgtcctctccacgcgagggaagctcggagaacagcgca
aatcccgcgaccgcagcggcggcgatcacaccgatgctcggcatgtacgcgaatccgtgg
accgtgcaaaactatagcgccttcttaccttacaacagtgccgagctggccctgctctct
cagatggggtcgcagtatgagctgaaggataaccccggggcacatccaccaggatttgca
gtccacgctgcgcccggtttctacccatacggccagtaccagtacggtgatccggcccgg
gccaagagcgctaccagagagaccaccagcacactgaaagcatggttgcaggagcataaa
aagaacccgtaccccaccaagggcgagaagatcatgctggccatcatcactaagatgacc
ctcacgcaggtgtccacctggttcgctaacgcgcgccggagactcaagaaggagaataaa
gtgacctggggtcgcagcgccgaggacagagacggacgaattttcgacagcgacaatgag
gacgacgcggacaaaaatgacgacgaggaagaaatagatctagagaccatcgacatggac
aaacctgaggagcccagaggagatcagaataaggaaagctcggataatcaacacgagaga
gaaaacatggaaacaccgcggatattatcctcaccggcacttaaaaacacggacagccct
gtgtcgagtagtaataaagaacagagtgtggtcaaaagcgttggtgaggtgtctcctggt
ggaccggtgtgtcagaggcctgggaacagcaaacccaaaatctggtctttggcggagacg
gcgacaagtcccgataacgcgcagaaactcggtgtctcctcgacgcccgcaggcctcagg
gcctcaccctcgacccatccggctttcctctccactaacggaatttatacttgccagatt
gggaaactacacaactgggcgagcgccgctttcctcagtgcaaattctctgatgggagtg
cgctcacttttgagtcaaaacagtaacttcccaaaccacagccctgttacgaaccccgaa
aagaaaccctcgtcggcctctgggtctccatgtctagacagcgacaactcatccgacagt
ttcagtcccaaacataatgatcaagagaacgtacaaagaattgaatctccaacacttgcg
tccagaccaccgtttccagtcatccatgacaggtctcatcatgaaacatcacaacgcgct
ctgaagacgatttcatga
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