Labeo rohita (rohu): 127181332
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Entry
127181332 CDS
T09007
Symbol
irx4b
Name
(RefSeq) iroquois-class homeodomain protein IRX-4b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127181332 (irx4b)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
127181332 (irx4b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
127181332
NCBI-ProteinID:
XP_050991966
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All DBs
Position
19:8871535..8876935
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AA seq
440 aa
AA seq
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MSFTQFGYSYPAAPQLLMSSNALSACYESGGSLLDSGVAASPQNSLYCPVYESRLVASSR
HDLIPTAVYGNSCSKSHGYDTCSTYGPDSTSYYPLGKLSEKDGVATGHSRVSQSSAYYPY
DYSIGQYQYDRYGYGSVDVGTRRKNATRETTSTLKAWLQEHKKNPYPTKGEKIMLAIITK
MTLTQVSTWFANARRRLKKENKMTWSPRNKTSDEKECDDDQDDMDESQGEPIKTEQEFND
NLGKDDADQLHSDLEDFDLVESDGSECESKPSFVMRVRSETSERPDHQFKEAFHESVTEL
PTDVHEFNEDCLRPTAEDNQTAKFYLQHGQKTIETKPKIWSLAQTATSLNQADYLSCMHK
ETSCSSSNCDSDSDITKRKQESPVATLRNWVDGVFHDPLFRHTNLNQTFSNSTELWTEAI
SSQNNYSEHSGPIASSQHTS
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttacacagtttggctattcatatcctgcagcaccacagcttttaatgtcttct
aacgctctgagcgcctgctatgagtctggtggttcactgctggactctggagtggcagct
tctcctcaaaactcactttattgcccggtatatgaaagtaggcttgtggcctccagccgt
catgacctgatccctactgctgtctatggcaactcctgctcaaagagtcatggttatgat
acctgcagcacttatggtccagattcaacctcatactatccactaggtaaactcagtgag
aaagatggagtggcaacaggacattcaagagtcagccaaagctctgcatactacccttac
gactactcaatcggacagtaccagtatgacagatatgggtatggatctgtagatgtgggc
acaagaagaaaaaatgctaccagggagaccaccagcacactgaaagcatggctgcaggaa
cataaaaagaacccgtatcccaccaagggcgagaagatcatgctggccatcatcactaag
atgacccttacgcaggtgtccacctggttcgccaacgcacggcgaagactcaagaaggaa
aacaaaatgacgtggtcaccacgcaacaagacctcagatgagaaagagtgtgatgatgac
caagatgatatggacgaatcgcagggagagccaataaaaacagaacaagaattcaatgac
aaccttggaaaagatgatgcggatcaacttcacagcgatctggaagatttcgatctagtg
gaatcagatggatccgagtgcgaatcgaaaccatcctttgtcatgcgcgttcgctcagag
accagcgaacgtccagatcaccaatttaaagaggcttttcacgaatccgttaccgagctc
ccgacagatgtccatgaatttaatgaagactgcttaagacctaccgctgaagacaaccag
acagcaaagttctaccttcaacatggccaaaagaccattgaaaccaagccaaaaatctgg
tcgcttgcacagactgctacgtcgttaaaccaagccgattacttatcatgcatgcataaa
gaaacgtcgtgctcttcttcaaactgtgactcagactcagacataacaaagaggaaacaa
gagtctccagtggccactcttagaaactgggttgacggtgtgtttcacgatcctttattc
aggcacaccaacttaaaccaaactttcagcaactccacagagttatggactgaagccatt
tcctcgcagaataactacagtgaacactcaggacctattgcttcctctcagcatacttca
taa
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