KEGG   Labeo rohita (rohu): 127181371
Entry
127181371         CDS       T09007                                 
Symbol
ubap2l
Name
(RefSeq) ubiquitin-associated protein 2-like isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
lroh  Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lroh04121]
    127181371 (ubap2l)
   03400 DNA repair and recombination proteins [BR:lroh03400]
    127181371 (ubap2l)
Ubiquitin system [BR:lroh04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    127181371 (ubap2l)
DNA repair and recombination proteins [BR:lroh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     127181371 (ubap2l)
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A UBA_4 UBA_8 GIP1_N CUE
Other DBs
NCBI-GeneID: 127181371
NCBI-ProteinID: XP_050992018
LinkDB
Position
19:complement(26573190..26599661)
AA seq 1219 aa
MMTSVGGSRTRGNWEQTQGQTQSQSQHKQRPQATAEQIRLAQMISDHNDADFEEKVKQLV
DITGKDQDESMIALHDCNGDVNRAINVLLEGSPDTDSWEMVGKKKGVSGQKESAQTDGGD
EGKENREKGGERDVARRRGGAPRRGRGASRGREFRGQENGLDGAKAGGVAGRGTERGRRG
RGRGRGGAGRRGGRFSAQGMGQIDKGPRYDLSGDESTFNPADYTEPAQTEESYSSGSTWS
NTGNLEPEDGNRLEFTGGEGTNYPRKFDSAPGAWRTATEEWGMEDWNEDLSETKIFTASS
VASMPIPQENVTITAGQRIDLAVLLGKTPPTSSSEAEPASLEGSQPPSLSQSLVFSNSKQ
TASLSQSSSSAPYSQHSMVSMLSKGFGDVGDPKGTTGGSTTGSQFLEQFKTAQALAQLAA
QHSHSGPPNAGPSTWDTSPTSLGQYDMKPQTEPVHSPFTKRQPYQPTSTSSSMMDAFLQD
KATPASATSTLPLQSTPSSSSLPQAVTTPVSKPSGPTPGQQNSSSPADPQASSPLPLQQH
KLKQQKKRASITTKIPALAVEMPGSADISGLNLQFGALQFGSEPVLPEYDASAAVATTTP
GNQGQNSLYTSASNEQATALSNPSQMELYEPRASQTRRYPPSVSSSPQKDIQSKNGFSSM
QTSQSLEAAAGSAVPVKPASESVVPPSVSNISSLADPSSGPTSLLTTSNQTPLSALGHED
ASPSSLAPPQHNNSLPTQQSSLAPSSVRTSNTGLLHPSVDGDSSLHSSSFSSVSAVAPSS
VPPPSSATSAAPVSHTGPVAPSSSVSSVSAQSALGPVSSLTMGLNSGAGVVSMAPPTAAA
SSSSSSSAALATAAPSSASSSRSTAASGKAPPNLPPGVPPLLPNPYIMAPGLLHPYPPQV
YGYDDLQMLQTRIPLDYYSIPFATPTTALTGREGSLTSNPYSAGDLSKFGRGDASSPAPA
TTLAQPQQTQTQTHHTTQQPFLNPALPPGYSYTSLPYYTGVPGLPNTFQYGPAMFPVAPT
SSKQHGVNVGVNASATAFQQASGYGSHGYSTGYEDLGQASAGSGDFCKGGYGTAVAAAAA
AAAAASAQNKPASSVTGPGVGVSVTSSNTGVPDISGSVYTKTQSFEKQGFHTGTPSASFS
LPSALGSGGPINPPAAAGYAPAPYMHILTPHQQPHSQMLHHHLQQDGQSGSGQRSQNASI
QQKSQINKSGYNSYNWGGN
NT seq 3660 nt   +upstreamnt  +downstreamnt
atgatgacttcagtgggcggaagccggacccggggcaactgggagcagacgcagggtcag
acacagagccagtcacagcacaagcagaggccccaggccaccgctgagcagatccgactc
gcgcagatgatctcggaccataatgatgcagactttgaagagaaggtcaaacagctggtt
gacatcacaggaaaggatcaggatgagtccatgatagcgcttcacgactgcaatggagac
gtcaacagagccatcaatgtcctgttggagggcagccctgacactgactcatgggagatg
gttggaaagaagaaaggagtttcaggtcagaaggaaagcgcacagacagatggaggagat
gaagggaaggagaaccgagagaaaggaggagaaagagatgtggcacgtcgcagaggaggg
gccccgcggaggggccgtggagccagccgtgggcgagagttccgtggacaggaaaatggg
ttggatggggccaaggcaggtggagttgcaggcagaggaacggagcgaggccgtcgggga
agaggtagaggaagaggtggagctggaagacgaggagggaggttttcagctcagggcatg
ggccagattgataagggccccagatatgatttgtcaggagatgagagtacgtttaaccca
gcggactacactgagccagcccaaacagaggaaagctactcaagcggcagcacttggagt
aacacaggcaacctggaacccgaggatggaaacaggctggagtttacaggtggagaggga
acaaactatcctcgaaaatttgactcggcccctggtgcttggagaactgccacagaagag
tggggcatggaggactggaatgaggatttgtcagagaccaagatattcactgcctccagt
gtggcgtccatgcccattccacaggagaatgtcaccattactgctggacagaggattgat
ctggcggtgttgctggggaagacgcctcccacctcttcctcagaggcagagcctgcttcg
cttgaaggctcacagccgccatctctgtctcagtctctggtgttcagcaactccaagcag
acagcatcactgtcccagtcctcctccagtgctccttacagtcagcacagcatggtgagc
atgctcagtaagggttttggtgatgttggcgatccaaaaggaaccactggaggctccacg
actggttctcaattcctggagcagtttaagacggcccaggctttggcccagctagcagcc
cagcactcacacagtggcccgcccaatgctggtccttctacatgggataccagccccact
tccctggggcaatacgatatgaaacctcaaacggagcctgtacacagtcccttcaccaaa
cggcagccctaccagcccacctccacttcctcttccatgatggacgccttcttgcaggac
aaagccacacctgcttctgccacctccaccctgcctcttcagtccaccccatcatcatca
tcattgccccaggcagttaccacccctgtctccaaaccctcgggacccacaccaggtcag
cagaactcttccagccctgctgacccacaggcatccagcccactccccctgcagcagcac
aagctcaaacagcagaagaagagggcttccatcacaaccaagattccagccctagcagtg
gagatgccaggctctgcggatatatccgggctcaacctgcagtttggagcattacagttc
ggctctgaaccggtgcttcctgagtacgatgcctcggcagctgttgccacaacgacacca
ggcaaccaaggccagaacagcctttatacaagtgctagcaatgagcaagcaacggccctg
tccaaccccagtcagatggagctttatgagccaagagccagccagacacggcgctaccct
ccttctgtgtcgtcctcaccacagaaggacattcagtccaagaatgggttcagttcgatg
cagacgtcacaatctctggaagctgcagcaggctctgcagtgcctgtgaaaccggcgtcc
gaatcggttgtcccgccatcggtttccaacatatcctcattggctgacccctcatcaggt
cctacgtccctgctgactacatccaatcagacgcctctcagtgctctcggacacgaagac
gcctcgccaagctcactggctcctcctcagcacaataactccctcccgacacagcagagc
agtttggcaccttcttcagttcgcacttcaaacacaggtttgctgcacccaagtgtggat
ggcgattccagcttgcactcatcatcattctcgtcggtctctgctgtggctccttcttca
gttcccccaccatcttcagctacttcagcggcccctgtttcccataccgggcccgttgcc
ccctcttcatctgtcagttcggtctctgcgcagtctgcactgggcccggtcagcagtctg
actatgggattgaacagtggtgctggtgtggtttcaatggcccctcctacagccgctgcg
tcatcatcatcatcatcatctgctgcgctggccactgcagcaccttcatctgcctcgtcg
tcacgcagcacagctgcctcagggaaagcacctccaaacttgcctcctggagtgcctccc
ttgctgcccaacccttacattatggctcctggccttcttcacccatacccacctcaagtg
tatggctatgatgacttacagatgctgcagaccaggataccactggactattatagcatc
ccatttgctactccaaccacagcgctgactggcagggaaggaagtttgacaagcaaccct
tattctgctggcgacttgtcgaagttcggccgtggtgacgcctcgtctcctgccccagcc
acaacactggcccagccccagcagacccagacacaaacgcaccacaccacccagcagccc
ttcctcaacccagcccttccacctggatacagctacaccagcctgccctattacactggt
gtccccggtctgcccaacaccttccagtatggccctgccatgtttccggtggctcctacc
tcctccaaacagcacggtgtgaatgttggtgtcaatgcgtcagcaacggccttccagcaa
gctagcggttatggatcacatggatacagcactggctatgaggatttgggccaggcttcg
gcagggagcggggatttctgtaagggcggctacggcaccgccgttgccgcagccgctgct
gccgccgccgctgcttctgcgcaaaacaagcccgccagctccgtcaccgggcccggagtg
ggtgtctctgtgacatcaagcaacacgggagtccctgacatttcagggtctgtttacaca
aagacgcagtcttttgagaagcagggtttccacacaggaacccccagcgcttccttcagt
ttgccctcagcacttgggagcggtggccccatcaaccctccggctgcggcgggttatgct
ccagccccttacatgcacatcctgaccccacatcagcagccccactctcagatgctccac
caccatctgcagcaggacggacagagtggctctggacagcgcagtcagaacgcctccatt
cagcagaagtcacagatcaacaagtcgggatacaacagctacaactggggaggcaactaa

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