Labeo rohita (rohu): 127181403
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Entry
127181403 CDS
T09007
Symbol
recql4
Name
(RefSeq) ATP-dependent DNA helicase Q4
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lroh03032
]
127181403 (recql4)
03400 DNA repair and recombination proteins [BR:
lroh03400
]
127181403 (recql4)
Enzymes [BR:
lroh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
127181403 (recql4)
DNA replication proteins [BR:
lroh03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
127181403 (recql4)
DNA repair and recombination proteins [BR:
lroh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
127181403 (recql4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
Drc1-Sld2
zf-CCHC
zf-CCHC_5
zf-CCHC_3
ResIII
Motif
Other DBs
NCBI-GeneID:
127181403
NCBI-ProteinID:
XP_050992094
LinkDB
All DBs
Position
19:complement(26986345..27002591)
Genome browser
AA seq
1469 aa
AA seq
DB search
MDRYNDVKILLKKWEQSFFQTNNRKPNKDDIDKAPEETRQLYKEYRSLKQAKERNGTGQE
AHTKPPESQPSTTESGCWGSHLDRKNLPADVPKLSSDDKETLKASAQYFGMKLKNNLGAL
TKERSFSLKKATTPRRTPMKPLKDTPDSSATLTDVETHTPKPANTCPDPSAPPVQTTSTG
FEDEPSDPFPSITPSKSWSPAVGSTHKGVERVQFLRQSMTKRFSSVDSGWLARCQVFDEV
EEPQKPVAGNSELSKIENSFSQPTVGGETVPNEGQTSPKTSVEKKKPALSENGAQKEPVA
SLVRNNLVVDAELGSPGPDGGDQVYQKNTAAHMGDDETCSEEPKSASNTKKRKPKARKDQ
DSGDNPQDEGGKKTKGRKRQREGDDDVDESEEQEGGVKKRRRTKKGEAAEEPQAKKRGKR
KGKVEEEDDTASSEKKTTQKRAIPRENLLGEVDEEEARAAAYTMKNTVRARPTKNTDGNF
VKINLKKKSHVKGFALRGAALRKQMYMQKFQLKGERFGGGFGRGRGRFGGFNRQGDTCYK
CGGTGHWARDCRGRAPVVSSAEQQETQVEEEEFELPTLEEVARATGTLRSEPIVAPPTVG
EDSCEKEDQGAEILLNIIRPDYERPAPPPPMEALYRPKDDGKIQDVPPEVYEALRDFGYK
SFRPGQETAIMRILSGLSTLVVLSTGMGKSLCYQLPAYLYAQRSKCITLVVSPLVSLMDD
QLSGLPPKLKAACIHSNMSQKQREAAIEKVKAGQVHVLLLSPEALVGGGHSGSGCLPPAD
QLPPVAFACIDEAHCVSEWSHNFRPCYLRLCKVLRDRLGVRCLLGLTATATLSTALDIAR
HLDISDQDGIAVRSAAVPHNLQLSVSMDRDKDQALVSLLKGERFGALESVIVYCTRREET
SRIAALLRTCLQGVMLRESSKPAPEDEEDNPVGKKKKALARKKIRKPLKWIAEAYHAGMS
ASERRRVQNNFMCGELRVVVATVAFGMGLDKSDVRGIIHYNMPKSFESYVQEIGRAGRDG
HPAHCHLFLDPEGADLHELRRHIYADTVDYYTVKKLVQKVFPPCKCRQIHQKQQDLAQAA
EVSDSELLEMEVCEDTDPHQQQQQLIETAAPTDQQPPQTHTPHEHNKPTQMAEEETEESD
GLTLSDVRVQRACHTHERAIPMQETVETLDITEESLETLLCYLELHPQQWVELLHPTLSI
CKLQCYGGPQQLRKITKLCPPVAVALARKRMAGERVESCDALEFDVVELADTMGWQLPLV
KRGLRQLQWGSDTGSYGGTGRSGVHVEFSALSFYFRSYGDLTADELDAVCGFLHSRVMAQ
ERTQLYQLKTCFKAFRSVAYRNCSLCMDDLEESRSQALKELLRDYFDKRRNLDLSKHYQE
EELDEEEELNKCKMRDWEVQICADIRGFLSSRSDEKFSGRAVARIFHGIGSPCYPAQTYG
RDRRYWRKYIQFDFNEIIRLATQEIIRTR
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atggatcgatacaatgatgtaaaaattctcctgaagaaatgggaacaatccttcttccaa
acaaacaacagaaaacctaataaggatgacattgataaagctccagaggagacgagacaa
ctctataaagaataccgttctcttaaacaagcaaaagaaagaaatggcactgggcaggag
gctcacacaaaacccccagaaagtcagccttcaacaactgaatctggatgctgggggtct
cacctggaccggaagaatctgccggctgatgtaccaaaactgtcctcggatgataaagag
acgctgaaagcctcagcgcagtacttcggcatgaagttgaaaaacaatcttggagcttta
acaaaggagcgatcattttctctgaaaaaagcaacaactcctcgccgaacaccaatgaaa
ccactgaaggacactccagactccagcgcaacactgacagatgtagagactcacacacca
aagccagccaacacatgtccagaccccagtgctcctcctgtacagacaacaagcacaggc
tttgaggatgagccatcagatccctttccgtccataaccccctccaaatcctggtctcca
gctgtgggctccacacacaagggtgtggagagggtccagtttctgaggcagtccatgacc
aagaggttttcctctgtggacagtggctggcttgcacgttgccaggttttcgatgaggtg
gaggaacctcagaaacctgttgctgggaattcagagctgtcgaaaatcgaaaacagtttc
tcacaacctactgttggaggtgaaactgtgccaaatgagggtcaaacatctccaaagact
tcagtggagaagaagaaacctgccttgtcagagaacggtgcacagaaagaaccagtagca
tctttagtaagaaacaatttggtggtggatgcagaattgggctccccggggcctgatggt
ggtgaccaggtatatcaaaaaaacactgcggctcacatgggagatgatgagacctgttca
gaggagcctaaatctgcttcaaacactaagaaacgcaaacccaaggctaggaaagatcaa
gactctggtgacaacccacaggacgaaggtggcaaaaaaacaaaaggtcgaaaaagacaa
agggagggtgatgatgatgtagacgaatctgaggagcaagaaggtggagtgaaaaagaga
agaagaaccaagaaaggagaggcagctgaagagcctcaggccaaaaaacgagggaagagg
aaaggaaaagtcgaggaagaggatgataccgccagctcagagaaaaaaacaacccagaaa
cgagcgattcctcgggagaatctgctgggagaggtggatgaggaggaggccagagctgct
gcttatacaatgaagaatacagtcagggccaggcctaccaaaaacacagatggcaacttt
gtgaaaatcaatttgaaaaagaagtcccatgtcaagggattcgctttgagaggagctgca
ttgaggaaacagatgtacatgcagaagttccagctgaagggcgagcggtttgggggtgga
tttggtaggggcaggggtcggttcggcggcttcaatcgtcaaggtgacacctgctacaag
tgcggcgggacgggtcactgggcacgagactgtcgaggaagagctcctgttgtgagttct
gcagaacagcaggaaacccaagtagaggaggaggagtttgagctgcccacactggaggaa
gttgcccgggcgacaggaactctgcggtcagagcctattgtggcccctcccactgttggc
gaagactcttgtgagaaagaggatcagggggcggaaattctgctcaatatcattagaccc
gattatgagcggcccgcccctcctccccctatggaggcgctctacagaccaaaggatgat
ggaaaaattcaagatgtcccaccagaagtgtatgaagcgctccgagactttggttacaag
tccttcaggcctggccaggagacggccatcatgaggatcctgtcaggtttatccacacta
gtggttttgtccaccggtatgggtaagtctctgtgctaccagcttcctgcgtacctgtac
gctcagaggtcaaagtgcatcacactggtggtgtctcctttagtgtccctgatggacgat
cagctctccggactcccgccgaagctgaaagccgcctgcatccactccaacatgtctcag
aaacagagagaggcggccattgagaaggtgaaggccggtcaggtgcacgtcctgctgttg
tctcctgaagctctggttggtggaggtcactcaggctcaggatgcctccctcctgcagac
cagctcccccctgtggctttcgcctgcatcgacgaggctcactgtgtgtctgaatggtcg
cacaacttccgaccctgttacctgagactgtgcaaggtgctcagagatcggttgggtgtg
cgctgtctgttgggtcttaccgccacggccactctgtccacagcactggacatcgctcgt
cacctggacatcagcgatcaggacggaatcgctgtccgttctgctgctgttcctcacaac
ctccagttatccgtgtccatggacagagacaaagatcaagctcttgtgtctttgctgaag
ggcgaacgctttggtgctctagagtcagttatcgtctactgtaccaggcgagaggagacg
tctcgtatcgctgcactcttgcgcacctgcttgcagggggtgatgttgagagagtcgtcc
aaaccagcaccagaggatgaggaggacaatcctgtagggaagaaaaagaaagctctggcc
aggaagaagatccgtaagccattgaagtggatcgcggaggcgtaccatgctgggatgtct
gcgtcggagaggcgacgtgtgcagaataacttcatgtgcggggagctgcgtgtggtggtg
gccaccgtggccttcggtatggggttggacaagtcagacgtgcgtggcatcatccactac
aacatgcccaaaagttttgagagctacgtgcaggagattggccgagcgggacgtgacgga
cacccagcacactgtcacctgtttctagacccagagggtgcagatctgcacgagctgcgc
aggcacatctacgcggacacagtggattattatacagtgaagaaactggtccaaaaggtt
tttccaccttgtaaatgccgacagattcatcagaagcagcaggatttggctcaggctgct
gaagtatctgacagtgagttactggagatggaggtttgtgaggacactgatccacaccag
cagcagcagcagctgatcgagacagcggctcccacagaccaacaaccaccacagacacac
actccacatgagcacaacaaaccaacacagatggcagaggaggagacggaggagagcgat
ggtctgacattgagtgacgtgcgtgtacagcgtgcatgtcacacacatgagagagccatt
cccatgcaggagaccgtggagaccctcgacatcacggaagagagtctggagactctgttg
tgttaccttgagcttcatcctcagcagtgggtggagcttctccacccgacgctctccatc
tgtaagctgcagtgctacggcggtccacagcaactccgcaaaatcaccaaactgtgtcct
ccggtcgctgtggcgctggctcgcaaacgcatggctggggagcgtgtggagtcgtgtgac
gctctggagtttgacgtggtggagctggcggacactatgggctggcagcttcctctggtg
aagagaggcctgagacagcttcagtggggctcagacacaggttcatatggaggcacggga
cgaagtggcgtccatgtggagttttcagcactgtccttctatttccgctcatatggtgac
ctgacagcagatgagctggacgcggtttgtgggtttttgcacagcagagtgatggcacag
gagaggacgcagctgtaccagctcaaaacctgcttcaaagccttccgcagtgttgcgtac
cgcaactgcagtctgtgtatggatgatctggaggaaagccggagtcaggctctcaaagag
ctgctgcgcgattatttcgacaagaggagaaacctagacctgagcaaacactatcaggag
gaagagcttgacgaagaggaagagctcaacaaatgcaagatgagggactgggaagttcag
atctgtgcggacatcagaggttttctgtctagtcgcagcgatgagaagttctccggtcga
gctgtggccagaatcttccatggcatcggaagtccgtgttatccagcccagacgtacgga
cgtgaccgaagatactggaggaaatacattcagtttgatttcaatgagatcattcgttta
gctacacaggagatcattagaacgaggtga
DBGET
integrated database retrieval system
