Labeo rohita (rohu): 127181458
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Entry
127181458 CDS
T09007
Symbol
exosc7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127181458 (exosc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127181458 (exosc7)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
127181458 (exosc7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
127181458 (exosc7)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DDE_Tnp_4
Motif
Other DBs
NCBI-GeneID:
127181458
NCBI-ProteinID:
XP_050992174
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Position
19:complement(27039919..27045735)
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AA seq
291 aa
AA seq
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MAAVQVSEAEKVYIMHGVRDDLRLDGRGCEDYRHMEIETDVVSNTDGSAKISLGHTDVLV
GIKAEIGKPKPMVPNEGYLEFFVDCSANATPEFEGRGGEELGVELSNTLYKVFNNRHSVD
LRSLCICPGENCWVLYVDVLLLQCDGNLFDAISIAIKAALFNTRIPKVHISEDEEGVKEI
ELSDDPYDCMRLNVENVPCIVTLCKIGQRYVVDATLQEKACSVASLLISVTHKGMVTCVR
KMGGGSLDPESIFEMTEAGKRVGKALHAPLIELLQKEESLGKKRQKVGFLG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagttcaagtaagcgaagcggagaaggtttatattatgcatggagttcgagat
gacctcagattggatggacgaggatgtgaagactacagacacatggagattgagacagat
gtggtgtcaaacactgatggttctgctaaaatcagtcttggtcacacagatgttcttgta
ggaataaaggcagagattggtaaacccaaacccatggtgccaaatgaaggctatctggag
ttctttgtggactgctcagcaaacgccactccagagtttgaggggcgtggaggggaggag
ctgggggtggagcttagtaacacactctataaagtgttcaacaacagacacagcgtggac
ctgcgttctctctgcatctgcccgggagagaactgctgggtgctgtacgtggatgtgctg
ctgctgcagtgtgatggaaacctgtttgacgccatatccattgcaataaaagctgctctg
tttaatacacgaatccccaaagtgcacatatctgaggatgaggagggtgtgaaggagatc
gagctgtcagacgacccttacgactgcatgcggctcaatgtggaaaatgtgccatgtatc
gtaaccctctgcaagattggtcagagatatgtggtggatgccacgctacaggaaaaggcc
tgttctgtggccagtcttctgatttcagtcacacataaaggaatggtcacatgtgtcagg
aaaatgggaggaggaagtctggacccagagagtatctttgagatgacagaggccggtaaa
cgtgtgggaaaggctcttcatgcgcctctcattgagctgctgcagaaagaagaaagtctt
ggcaagaaacggcagaaagtgggattccttggatag
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