Labeo rohita (rohu): 127181461
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Entry
127181461 CDS
T09007
Symbol
clasp2
Name
(RefSeq) LOW QUALITY PROTEIN: CLIP-associating protein 2
KO
K16578
CLIP-associating protein 1/2
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127181461 (clasp2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lroh04812
]
127181461 (clasp2)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
127181461 (clasp2)
Cytoskeleton proteins [BR:
lroh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
127181461 (clasp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
HEAT_EZ
TOR1L1_N
Cnd1
HEAT_2
HEAT_DAAF5
MMS19_C
ParcG
IFRD
UTP20
TAN
Tra1_ring
DUF6415
Motif
Other DBs
NCBI-GeneID:
127181461
NCBI-ProteinID:
XP_050992176
LinkDB
All DBs
Position
19:18682470..18743352
Genome browser
AA seq
1560 aa
AA seq
DB search
MEENDNMDYFYQQVLQKDVTRRLQVGPDLIDYLSDPQRSCDVEQDKPRLDKTIDELTGWV
NSSNYKVILLGIDIVSAFVDRLTERFRGYIGTVVPALVDRLGDAKDQVREQAQALILRLM
EQTATPMYVWERLFTGFKHKNFRSREGLCLCLVATLNAYGAQPLSLSKFVPHLCSLTGDQ
NPQVREAAITTLVEVYRHVGERVRADLSKRDLPSARLQTILSRFDEVLNSGNMALSLSQD
RSFDDDDSVDGSRPSSAQAAFKVPKVPKKPGDSASSSRRPSATGAAKTGVSKEGAGAVDE
EDFIKAFTDVPTVQIYSTRDLEDNLNKIREVLSDDKHDWDHRANALKKIRSLLVAGAADY
DCFYQHLRLLDGAFKLSAKDLRSQVVREACITVAHLSTLLGTKFDHGAEAIVPVLFNLIP
NCAKVMSTSGTAAIRIIIRHTHVPRLIPLITGNCTSKSVAVRRRCYDFLDLLLQEWQTHS
LERHVAVLVDSIRKGIRDADSEARVEARKAYWGLRAHFPGEADSLYNSLESSYQKTLQSC
LKSSGSVASLPQSDRSSSSSQESLNRPLSKWSAAPGRVPASSKSSGSPGSLQRSRSDVDV
NAAAGAKARHSGQAGGAGRVTTGLAPGSYASLDDASDKDGRLRTKQTLSTASSMGSTQVD
SRGRTRSKMVSQSQRSDDSDCTPGSQSATPVGAGSRSGSPGRVLTSTALSTLSTGAQRVS
AAPGSHRRSRIPRSQGCSRDSSPTRLSVAPSNISHIYNGSKGARGSRIPRPSVSQGCSRE
ASRESSRDTSPVRSFTPLASRHYSRSTGALHAPDAFGAAGSGLGMSQSSRLSSSVSAMRV
LNTGSDVEEALADALLLGDMRGKKKPARRRYDTYGMYSDDDANSDASSACSERSYSSRNG
SIPTYMRQTEDVAEVLNRCASANWSERKEGLMGLQALLKNQRTLSRVELKRLCEIFTRMF
ADPHSKRDSRGFGTAESGISSASFKVFSMFLETLVDFIAVHKEDLQDWLFVLLTQLLKKM
GADLLGSVQAKVQKALDVTRESFPNDLQFTILMRFTVDQTQTPNLKVKVAILKYIETLTL
QMEPQDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQSVLISLFQLNTPEFTMLLAALPK
TFQDGATKLLQNHLRNTGNTAQAPMGSPLTRHTPRSPASWSSPLTSPTNTSQNTPSPSAF
DYDTENMNSEEIYSSLRGVSQAIQNFSVRSQEDMTEPPRKRDGDGGEEGGDQPTDSGRTA
LDNKTSLLNTMPLLSSSPRPAREYQPVSYSDSSFTSSPFNKSLKDADQDAESLTDDSGVD
QSEVVAELLKELSNHSERVEERKAALCELMRLIRETQLHVWDEHFKTILLLLLETLGDGE
HVIRALALRVLKEILNRQPWRFKNYAELTIMKTLEAHKDPHKEVVRAAEEAASMLATSIS
PDQCIKVLCPIIQSADYPINLAAIKMLTKVIDRLPKEGLLQMLPEIVPGLIQGYDNSESS
VRKACVFCLVAIYAVIGEDLKPHLSQLSGSKLKLLNLYIKRAQSGSSGSDQSSDVGGQGL
NT seq
4683 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaatgacaacatggactatttttaccagcaggttttgcagaaggacgtgacc
cggcggctgcaggtcggcccggatctcatagactacctgagcgacccgcagaggtcctgc
gatgttgagcaggacaaaccccgcctggataaaaccatagatgagctgacgggatgggtc
aattccagcaattacaaggttatattgctggggatcgatatcgtcagcgcatttgtggat
cggttgactgaacgcttcagaggttatatcggcacagtggtgcctgcattagttgatcgt
ttgggtgatgcaaaggatcaggttcgagaacaggcacaagcactcattttgaggctgatg
gagcagacggcaacacccatgtatgtttgggaaaggctgtttactggcttcaaacacaaa
aacttccgcagtagagagggactctgcttgtgcttggttgccacgctaaatgcttatggt
gctcagcccttgagtttgagtaaatttgttccacatctctgttcgctaactggagaccaa
aacccccaggtacgggaggcagctataacaaccctagtggaggtgtatcggcatgtgggg
gagagagtgagagcagacctcagcaagagagatttaccatctgcacggttacagaccatt
ttgagccgttttgatgaagtactgaattcggggaacatggctctcagcctgagtcaagat
cgtagttttgacgacgatgactctgtggatggaagcaggccgtcgtcggctcaggccgcg
tttaaagtgcccaaagtacccaagaaacctggagactctgccagcagttccagacgaccc
agtgccactggagctgccaagacaggtgtctctaaggagggggcaggagctgtggatgag
gaggattttatcaaagcgttcacagacgtccccacggttcagatctactccacacgagac
ctggaggataatctgaacaagatccgtgaggttctgtctgacgataaacacgactgggac
catagagcaaacgcgctaaagaaaatccgatctctgctggttgccggggcagcagactat
gattgtttctaccagcacctgcggttgttggatggcgcatttaagctgtctgcaaaagac
ctgcgttctcaggtggtgcgggaggcttgcatcacagtggcgcatctgtccacgctgtta
gggactaaatttgatcatggagcagaggccattgttccggtgctcttcaatcttattcct
aactgtgccaaagtgatgtcaacatctggcacagcagccatacgcatcatcatacggcac
actcatgtcccacgtctaattcctctcatcactggtaactgcacgtcaaagtctgtggcc
gtccggaggcgctgttatgattttttggatcttctgctgcaggaatggcagactcactct
ctggagaggcatgtggctgtgttggtggacagtattaggaagggaatcagagatgcagac
tccgaggctcgagtggaggccaggaaggcatactgggggttgcgggctcatttccccggg
gaggcggattctctgtataactcattagaatcgtcctatcagaagacacttcagtcgtgt
ctaaagagctcgggcagcgtggcgtccctgccgcagtcagaccgctcatcctccagctcg
caagaaagccttaatcggccgctgtcaaagtggtcagctgctccaggaagagtgcctgct
agttcaaaatcatcaggatctccaggctctttgcagcgctcccgcagcgatgtggatgtc
aacgcagctgctggtgctaaagccagacacagtggacaggccggaggggccggccgagtc
acgacaggcctggcccctggatcatacgcatctctcgatgatgcctctgataaggatggg
cgactacggactaagcagactttatcaacggcatcaagtatgggcagcactcaggtggac
tcgagaggacggaccagatcaaagatggtgtctcagtcacaacgttccgacgattctgat
tgcacgccaggatcacagtccgctacccctgttggtgcgggttctcgctcaggttcccca
ggccgggttttgaccagcacggccctgagcacgctcagtacaggagctcaacgtgtgagc
gcagctccaggctcccaccgtcgcagccggatcccacgcagtcaaggctgcagtcgagac
tccagccccacacgcctctctgttgctccttcaaacatcagccacatctacaatggatca
aaaggagcgaggggtagtcgtataccacggcctagtgtgagtcagggctgcagtcgtgag
gccagccgagagagcagcagagacaccagccctgtgcgctccttcacgccgctcgcatcc
cggcattattcgcgctcaactggtgctcttcatgccccagatgccttcggggcagcaggt
tcagggttgggtatgtctcagtccagtcgtctctcatcctcagttagtgccatgagagtg
ctgaacacaggatcggatgtggaagaagccctggctgatgctctgctattaggagatatg
cggggcaagaagaaaccagctcggcggcggtatgatacctatgggatgtactcggatgat
gacgcaaatagcgacgcctccagcgcgtgttcggagcgttcgtacagctcccggaatggt
agtattcccacgtatatgcggcagactgaggatgtggccgaagtgctcaatcgctgtgcc
tctgccaactggtctgagagaaaagaggggctgatgggattacaggccttgctgaaaaac
cagcgaactcttagccgtgttgagctgaagaggttgtgtgaaattttcacaaggatgttt
gcagacccacacagcaagcgtgattccagaggcttcggcacggcagaatccggtatcagt
tctgcctcttttaaggtgttcagcatgtttttagagacgctggtggacttcattgcggtt
cataaggaggatctgcaggattggctctttgtgctgctcacacaactgctgaagaaaatg
ggagcagatctgcttggctcagtgcaagccaaagtacaaaaagccctagacgtcacaaga
gaatctttcccgaatgatctacagttcactattctaatgagattcacagttgaccaaaca
cagacacccaacttaaaggtgaaggtggccattttgaagtacatagaaacactcacacta
caaatggagccacaggattttgtcaactcgagcgaaaccagactggcagtgtcacgtatc
attacgtggaccaccgaacccaagagctccgatgtcagaaaggcagcacagtcggtgttg
atctcgctgtttcagttgaacacaccagagttcacaatgcttctagctgcactgcctaaa
acctttcaggatggagccaccaaattgttgcagaaccacctacggaacacaggcaacaca
gcccaggctccaatgggaagcccactcacccgacacactccaagatcaccagccagttgg
tctagccctttaacgtcccccaccaatacatcccaaaacacaccttcaccaagtgcattt
gattatgatactgagaacatgaactctgaggagatctacagctccttgagaggagtcagt
caggccatccagaacttcagtgtccgcagccaagaggacatgactgagccaccgcgaaaa
agagatggagatggtggagaagagggtggtgatcaacccacagactctggtcggacggcg
ctggataacaagacctctctgctaaacactatgccactcctctcctcgagtccccgccca
gcaagggaataccagccagtcagctactctgactcctccttcacctcctccccttttaat
aaaagcctgaaagatgcagaccaagatgctgagtccctcactgatgacagtggcgtggac
cagtctgaggtggttgctgaactcctaaaggaactctcgaatcacagcgagcgggtggaa
gagagaaaagctgcgctgtgtgagctaatgcgtctgatcagagaaacacaactgcacgtt
tgggacgagcacttcaaaaccatcctgctgctgctcctggaaacactcggggatggagag
catgtcattcgggcattagcactgcgggtgttgaaggagatcctaaacaggcagccgtgg
cgctttaaaaactatgcggaactcaccattatgaagaccctggaagcacataaagaccca
cacaaagaggtggtacgggctgcagaagaggcagcgtctatgttggcgacctcaataagt
cccgatcagtgtattaaggtgttgtgccccatcatccagtcagcagattaccccatcaac
ctagctgccatcaagatgctcaccaaagtcattgaccggctacccaaagagggtctcctt
caaatgctccctgagatcgtccctgggctcattcagggttatgataactcagaaagcagt
gtacgaaaggcgtgtgtattttgccttgtggccatctatgctgtcattggagaggatctg
aaacctcacctcagccagctgtctggcagcaagctgaaactgttgaatttgtatataaag
cgagctcagagcggctccagcggaagtgaccagtcttcagacgtgggagggcagggcctg
tag
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integrated database retrieval system
