Labeo rohita (rohu): 127181570
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Entry
127181570 CDS
T09007
Symbol
hoxa3a
Name
(RefSeq) homeobox protein Hox-A3a isoform X1
KO
K09303
homeobox protein HoxA/B/D3
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127181570 (hoxa3a)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
127181570 (hoxa3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4074
Homeodomain
Homeobox_KN
DUF7255
Motif
Other DBs
NCBI-GeneID:
127181570
NCBI-ProteinID:
XP_050992298
LinkDB
All DBs
Position
19:22455012..22458571
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AA seq
411 aa
AA seq
DB search
MQKATYCDGSAIYSGFPYQSANGLGYDANQQQYLQALHVESEYHRPACSLQSPGGSAALH
KPNEISEGCQRSNGTQAPVPDIPDNNQPPTAPSGPSSPSSLNQIPSNDTTGKNPGHASPT
PATRKHIFPWMKESRQNTKQKSCSTISVESCAGDKSPPGSAASKRARTAYTSAQLVELEK
EFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKGLGMMPSPGAQSPHSPV
ALSSGGGGGGGSAYLSSMHSLVNSVPYDSPSPATYNKPQPNAYSLPTSYPPPLSNCPPPQ
KRYPGTGTATPEYDTHHLQGNNNYGTQVHGSPVYVSGGGGYSDSLVGMGASVFGLTHLPH
PPQGNIDYNGAITMGNSHQQGTCEPNPCTFTDLTPHYSQGRIQEAPKLTHL
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaagcgacctattgcgacggctcggcaatttacagtggcttcccctatcaaagc
gcaaacggtttaggttatgatgccaatcagcagcaatatctccaggcccttcatgtggaa
agtgagtaccatcgaccggcctgctccctgcagtcccctggtggctctgcagctctgcac
aaacccaatgaaatctccgagggctgccagcggagtaacgggacacaagccccagtacca
gatatccccgacaacaaccagccccctactgccccttccggaccatcttcccccagttcc
cttaatcaaattccgagcaatgataccaccggcaagaacccagggcacgcatctccaacg
ccagccacaagaaaacacatttttccgtggatgaaggaatcccgtcagaacacaaagcag
aaatcctgtagcaccatttcagtagagagctgcgctggagacaagagtccccccggttcg
gccgcctccaagcgcgctcgtactgcatacacctctgctcaacttgtagagctggagaaa
gaattccacttcaaccgttacctctgccgcccgcgaagagtggaaatggcaaatctgctc
aacctgacagaaaggcagattaaaatatggttccagaatcgcaggatgaagtacaaaaag
gaccagaaggggctagggatgatgccctctcctggagcacagtctcctcacagtcccgtt
gccctgtcatctggtggtggaggagggggtgggagtgcatatttaagttcaatgcattct
ctggttaacagcgtgccctacgattcaccctctccagcaacgtataacaaaccccagcca
aatgcgtacagccttcctacgtcatatccacctcctctgagtaactgcccgcctcctcag
aagcggtatccggggactggcacagccacgccggaatacgacacgcatcatcttcaaggc
aacaacaattacgggacgcaagtgcatggtagtccggtttacgtcagtggtggtggaggc
tactcggattctttggtggggatgggggcctcggtatttggcctgacacatctaccgcat
ccacctcaaggcaatatagactacaatggcgctatcaccatgggaaacagccatcagcaa
ggaacgtgcgaaccaaacccatgcacattcacagaccttacaccgcactattctcaggga
agaattcaggaagcgcccaaactcacgcatctatag
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