Labeo rohita (rohu): 127181594
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Entry
127181594 CDS
T09007
Symbol
rxrba
Name
(RefSeq) retinoic acid receptor RXR-beta-A
KO
K08525
retinoid X receptor beta
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03320
PPAR signaling pathway
lroh04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
127181594 (rxrba)
03320 PPAR signaling pathway
127181594 (rxrba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127181594 (rxrba)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lroh03310
]
127181594 (rxrba)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
127181594 (rxrba)
Nuclear receptors [BR:
lroh03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
127181594 (rxrba)
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GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
C1_2
Motif
Other DBs
NCBI-GeneID:
127181594
NCBI-ProteinID:
XP_050992344
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Position
19:complement(31638769..31660273)
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AA seq
463 aa
AA seq
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MGDSRDSRSPDSSSVSSPPSGQRSPPLAPSAAAMTSLPPITSAVNSPISSMGSPFSVISS
SLGSPCLPGTPSVGYGPISSPQINSTVSMSGLHAVSSSDDVKPPFGLKPLSTHSPGPMVS
QKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKDCLVDKRQRNRCQYC
RYQKCLAMGMKREAVQEERQRNKERDGEVESTSAANEEMPVEKILEAEMAVEQKTELHAD
GSSGGNSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELSLDDQVILLRAGWNELLIASF
SHRSITVKDGILLATGLHVHRNSAHSAGVGAIFDRESAHNAEVGAIFDRVLTELVSKMRD
MQMDKTELGCLRAIILFNPDAKGLSSPSEVELLREKVYASLEAYCKQRYPDQQGRFAKLL
LRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLT
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacagcagagattctcgtagtccagacagctcatccgtttcctcgccaccatca
ggtcagcgttcgcccccgttggccccttcagctgccgccatgacttccctgccacccatc
acttcagctgtgaacagtcccatcagcagcatgggctcacccttctcggtcatcagctcc
tctctgggttctccttgccttcctggaactccctccgtaggctacggccccatcagcagc
ccacagatcaactccaccgtgtccatgtccggtctgcatgccgtcagcagctccgatgat
gtcaaaccgcccttcggtttgaagccactgtccacccacagccctgggcccatggtctct
cagaaacgcttgtgtgccatctgtggagatcgatcctctggcaagcactacggtgtgtac
agctgcgagggctgcaagggctttttcaagcgcactgtgagaaaggacctgagctacaca
tgcagagacaataaggactgtctggtggacaaacgccagaggaaccgctgccagtactgc
cgctaccagaagtgcctggccatggggatgaagagagaggccgttcaggaggagcgtcag
aggaacaaggagcgggacggagaggtagagtccaccagcgctgccaatgaagagatgccc
gtggagaaaattctggaggcagagatggctgtggagcagaagactgagctgcatgccgac
ggcagctcaggggggaattcgccaaacgatccagtcacaaatatctgccaagcggctgat
aaacagctgttcactttggtggagtgggcaaaacggatccctcatttcagtgagctgtct
ctggatgaccaggtcatcctcctgcgtgctggctggaatgagctactgattgcgtcattt
tctcatcgctccatcactgtgaaggatggcattctgctggccaccggcctccacgtgcac
aggaacagtgctcacagcgctggggtgggagccatctttgacagggagagtgcgcacaat
gcagaggttggggccatattcgacagggtgctgacggagctggtgagcaagatgagggac
atgcagatggataaaacagagttgggttgcctgagagccatcattctcttcaacccagat
gcaaagggattgtcaagcccaagtgaagtggagttactgagagagaaggtctatgcatcg
ttggaggcttattgtaaacagagataccctgaccagcagggcaggtttgccaagctcctc
ctccggctgccagcgctgcgctccattggcctaaagtgcttggagcacctgttcttcttc
aagctgattggagacaccccaatcgacaccttcttaatggaaatgcttgaagcgccgcat
cagctcacctaa
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