Labeo rohita (rohu): 127181622
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Entry
127181622 CDS
T09007
Symbol
pum1
Name
(RefSeq) LOW QUALITY PROTEIN: pumilio homolog 1
KO
K17943
pumilio RNA-binding family
Organism
lroh
Labeo rohita (rohu)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
CFAP61_N
Motif
Other DBs
NCBI-GeneID:
127181622
NCBI-ProteinID:
XP_050992392
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All DBs
Position
19:18864447..18886153
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AA seq
1153 aa
AA seq
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MSVACVLKRKAVLWQDSFSPHLRLPPPDRPLPSMPVVLSAAGHTPQPGPSPQAPPPTQGA
GRSQDDAMVDYFFQRQHGDQPGYNNCKHRWPTGDNIHADNQVRSMDELNHDFQALALEGR
AMGEQLLTGKKFWETDDSGKDGPKGIFLDQWRDSAWGASDHSVSQPIMVQRRPGQGFHGV
GEAGSVLSPRSESGGLGVSMVEYVLSSSPAEKMDSCLRKGAFGPRDSEADDPEKRVEQKP
KTTFDPERKELKETEPDVLDNPNGLPNQNGLDVDVKDFSRTPGNCPPTGPEVELGGPELA
GGAGPKPAEEFSNVETQNVTLDPMESVSMETLQFADYTGGQLPLDSTAATVGLFDYNSPQ
QLFQRPSALAVQQLTAAQQQQYALAAAQQPHIGLAPAAFVPNPYIISAAPPGTDPYAAGL
AAAATLGPAVMPPQYYGVTPWGVYPANLFQQQAATPSNSANQQPAAQTQQNQQQVMRAGG
NQRPLTPSQGQQGQQTEQLVAAAAVNSALAFGQSLAAGVPGYPVLAPAAYYDQTGALVVN
TGARGGPVRLMAPASVIISPSAAVAAAAASAGGANAGLGGGASGAFRALSSQQAPGQQGS
GALGGSSFYGSGSPSSSSQSSSLFSQGSAQPGNTSLGFNANPSSSLGATLGAALGGFGTA
VANSSSSGSRRDSLTGSSDLYKRTPSSLTPIGHGGFYNGLSFSSSPGPVGMPLPNQGPSH
SLTPPPSLSTHGSSSSLNLGGLTNGSGRFISAAPGAEAKYRSATTGSSLFSPSSQLFPSS
RLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHVMEFSQDQHGSRFIQLKLERASP
AERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLDQKLALAERIRGHVLSLALQMYGC
RVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPHALQFIIDAF
KGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEEIHQHTEQLVQDQYGNYVIQHVLEHG
RAEDKSKIVSEIRGNVLGLSQHKFASNVVEKCVTHSLRAERAMLIDEVCSMADGPHSALY
TMMKDQYANYVVQKMIDVAEPTQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGV
DLGPLCAPPNGIM
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtagcgtgtgtgttgaagaggaaagctgtgctctggcaggattcgttcagcccc
cacctgagactgcctccccctgacaggccattacccagcatgcctgtggtgctgagtgct
gcgggccacaccccccaacctggcccttctcctcaggcccctccccctacgcagggagcg
ggacgctctcaagatgacgccatggtggattacttcttccaacggcaacatggcgaccag
cccggctacaacaattgcaaacaccgctggccgactggtgacaacattcatgcagacaac
caggtacgatcgatggatgagcttaaccatgacttccaggcacttgcgctggagggccga
gcaatgggagagcagctccttactgggaagaagttttgggaaactgatgattcagggaaa
gatggaccaaaagggatctttctggaccagtggagagacagcgcttggggagcctctgat
cactcagtgtcccagccaatcatggtgcagcgccgaccaggccagggcttccatggcgtc
ggagaggctggatctgtgctgtcgccacgttctgagagcggtggattaggtgtctccatg
gtggagtacgttcttagctcctctcctgctgagaaaatggactcgtgtctgcgcaaagga
gcctttggtccaagagattcagaggcagatgaccctgagaaaagggtagagcaaaaaccc
aaaacaacctttgaccctgagcggaaggagcttaaggagacagagccagatgttttggat
aaccccaatggactacccaatcagaatggacttgatgttgacgttaaggattttagccgt
actcctggcaactgccctccgactggtccagaggtggagttgggtggaccagaactggct
ggaggtgcagggccaaaaccagcagaggagttctcaaatgttgaaacccaaaatgtgacc
ctggaccccatggaatctgtttccatggagactttacagtttgcagattacactggaggc
cagctgcctcttgactccacagctgccactgtcggcctgtttgattacaactctcctcag
cagctgtttcagaggcccagcgctctggcagtgcagcagctcaccgcagcccagcagcag
cagtatgctcttgccgccgctcaacaaccacacattggtttggctccagctgcatttgta
ccgaatccgtacatcatcagcgctgctccacccggcactgatccatatgctgccggcctc
gctgctgctgccactttaggtccagcggtgatgccccctcagtactatggtgtgactcca
tggggcgtgtatcctgccaacctattccagcagcaggctgccaccccctccaactcggcc
aaccagcagcctgcagcacagacccagcagaaccaacagcaggtgatgcgtgcaggtgga
aatcaacgacctctgactcccagtcaaggacagcagggtcagcagacagagcagcttgta
gcagcagcagctgtgaattctgccttggcatttgggcagagtctggcagcaggcgtacct
ggttatcccgtgttagctccagctgcatattatgaccagacaggtgcacttgtggtgaat
acaggtgctcgtggcggccctgttcgacttatggcccctgcatcggttatcatcagccca
tcagcagcagtggctgctgctgctgcctcagcaggtggggctaatgccggcctcggtggt
ggagcaagcggtgctttccgtgcattgagttcccagcaggctcctgggcagcaagggagc
ggggctttgggaggaagctctttttatgggagcggctccccaagctcctcctcacagagc
tcttcgctattttcacaaggctctgctcagccaggaaacacctcacttggattcaatgcc
aacccatcatcttctctgggagccacgcttggagcagcactcgggggttttggcacagca
gtggctaattccagttccagtgggtcccgtcgagattccctgacgggtagctctgatctg
tacaagcgcacacccagtagcctcacccctattggccatgggggcttttacaacggcctc
agctttagctcctcccctggcccagttggcatgcctcttccaaaccaaggcccctcccac
tctctcaccccgccaccctcgctctcgactcatggatcttcaagcagtcttaaccttggt
ggactgaccaatggcagtgggcgattcatctctgcggctccaggagcagaggcgaagtac
cgtagtgccaccacaggctcgtctctcttcagtcctagcagccagctcttcccatcatca
cggctacgctacggcatgtctgacgtgatgccatcgggacgcagccgtctgcttgaggac
ttcagaaacaaccgttaccccaacctgcagctgagagaaatcgcaggacacgttatggag
ttctctcaggaccagcatggctccaggtttatccagctgaaactggagagagcaagtcct
gcagaacgtcagttggttttcaatgagatactccaggcggcctaccaactcatggttgat
gtctttggaaattatgtcatccagaagttctttgagtttggcagtctcgatcagaagttg
gcgctggctgagcggatccgtggccatgttttatccctggcgctgcagatgtatggctgc
agagtgattcaaaaagctctggagtttatcccttcagaccaacaagtcattaatgagatg
gttcgggagcttgacggacatgtgttaaaatgcgtgaaggatcaaaatggcaatcatgtt
gtgcagaagtgcattgagtgtgtccagcctcatgctctgcagttcatcattgatgccttc
aaaggacaggtgtttgctctgtccacacacccatatggttgtcgggtgatccagcgtatt
ctggagcactgcctgcctgagcagactctaccgatactggaggaaatacatcaacacacc
gaacagctggtccaggatcagtatgggaattacgtaattcaacacgtgttggagcacggc
cgcgcagaggacaagagcaagattgtatctgaaatccgtggaaatgttttggggctcagc
cagcataagtttgccagtaatgtggtggagaagtgcgtgacccactcattgcgtgccgag
agggcgatgctgatcgatgaggtgtgcagtatggcagacgggccccacagtgccttatac
accatgatgaaggaccagtacgccaactatgttgtgcagaaaatgatcgatgtggctgag
ccgacacaacgcaagattgtaatgcacaagatccggccccatattgcgacactgaggaag
tacacgtacggaaagcacattttggccaagctggagaagtactacatgaagaatggagtt
gacctcgggccactctgtgcaccccctaatggcatcatgtaa
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