Labeo rohita (rohu): 127181801
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Entry
127181801 CDS
T09007
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
127181801 (snx13)
Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
127181801 (snx13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
NCH1
Motif
Other DBs
NCBI-GeneID:
127181801
NCBI-ProteinID:
XP_050992698
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All DBs
Position
19:complement(33439782..33481066)
Genome browser
AA seq
966 aa
AA seq
DB search
MFAEASLSIWGWGGLGVVLFLITFGPFAIFYLAFYILCFIGGGFVVLLLFGKISSEKHLE
RCEHSYLPSTQTSVLKVLEEMKSESKPIKIDRRLTGSSIIDEPLQQVIQFALRDYIQYWY
YTLSDDETFLLEIRQTVQNALVEFSTRSKEVDWQPYFTTRLVDDFATHLRVFRKAQERLN
EREDPKQRDAPEEMLDWFFEAEVEMERKICRDVVCTSRKDEEGYLRDLCEVLLYLLLPPG
DFHNKNMRYFLREVLARGVLLPLINQLSDPDYINQFIIWMIRDSSCNYEAFMNILKLTDK
AAELEAVKDKVIEELQYLRSLDTGGDDINYIKNQINSLLFVKKVCETRIQRLQSGKEVDA
LKLAANFGKLCVIPLEHILVHNIALQFFMDYMQHMGGQAILFFWLTVEGYRVTAQQQLEV
LQGGHRDGKRPSSQTTKGLLRAAALGVYDQYLSEKASPRVQVDEASVTKLAQKLNKEDPT
PEIFDEIQRKVYDMMLRDERFYPSFKQHPLYVRMLAELDMLKEPSFRGSDDGDGESFNGS
PTGSINLSLDDLSSGSVDESVQLHAFISDTADAFLNQLPVAGVCNDHGKTYALYTITVIR
KNSDGSEDIWKTYRRYSDFHDFHMRITEQFESLGPILKLPGKKTFNNMDREFLEKRKKDL
NAYLQLLLNPEMVKACPVLMPYVYDFLENKAYSKGKGDFARKMDTFVNPLRSSMRNVSNA
VKSLPDSLAEGVSKVSADMGRMSEKLGQDIKQSIFKVPPLIAKSDIDPEHCRVSAQLDDN
VDDNIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQLIKATYGDTINRKIVDHVDSMTS
PEQVSDYVKRFRDSYWPNGILAETPPRRDKSLRMRTRVAAKTTLLGIMPDELKHIIGAET
TRKGILRVFDMFQYQPLNRRLAYVFLEGFLETLFPQYKFPELFVKLHSRSPRVLRYSQKL
RSLHKR
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagaggccagtctgtccatctggggatgggggggtctgggagtcgtcctcttc
ctcatcacgtttggaccctttgccatcttttatctggccttctacatcctctgtttcatt
ggcgggggttttgtagtgcttcttttatttggaaagataagctcagagaaacatctggaa
aggtgtgaacactcctacctgccatcgacacagacgtccgtactgaaggttttggaggag
atgaaatcagagtccaaacccataaagatcgaccgtcgtctgacaggatccagtatcata
gatgagccactgcagcaggttatccagtttgctttgagggactatatccagtattggtat
tacacattgagtgacgatgaaacgttcctcttggagatccgacagacggtccagaacgcc
ctcgttgagttctccaccagatctaaagaagttgactggcagccgtatttcaccaccaga
ctggtggatgattttgcaactcacctgcgtgttttcagaaaagctcaggagaggctgaat
gaaagagaagatccaaaacaacgtgacgctccggaagagatgctggattggtttttcgag
gcggaggtggaaatggaaaggaagatttgtagagacgtcgtgtgcacgtcacgcaaagat
gaagaaggttacctgcgtgatctctgtgaagtgctgctgtacctgttactacctcctgga
gatttccacaacaagaatatgagatacttcctcagggaagttttggccagaggagttctg
ctgcccttaattaaccagctgagtgaccctgattacatcaatcagttcatcatctggatg
attcgtgactcaagctgcaactacgaggccttcatgaacatcttaaagttgacagacaaa
gcggccgagctggaggccgtcaaagacaaagtcatagaggagcttcagtatctccgatct
ctggacacgggcggagacgatatcaactacataaagaatcaaatcaatagtttgcttttt
gtgaagaaagtctgtgaaacacgcatacaacggctacaatcagggaaggaagttgacgct
ttgaaacttgcagctaattttgggaagttgtgtgtgattccgttggaacatatattagtg
cacaatatcgcgctgcagttcttcatggattacatgcagcacatgggcggtcaagcgatc
ctgttcttctggctgacggtggagggctatcgggtcacggcccagcagcagctggaggtc
ttacagggcggccacagagacggaaagaggccgagcagccagaccaccaaaggcctgctg
agagcggccgcgctgggcgtctacgaccagtacctgtccgagaaggcctctcctagagtg
caggtggacgaagcgtctgtaaccaaactggctcagaaacttaacaaagaggatcccaca
ccagagatattcgatgaaatccagagaaaggtgtacgatatgatgttgcgggatgagagg
ttttacccatcgtttaagcagcacccgctgtatgtgcggatgctggccgagctggacatg
ctgaaagagcccagtttcaggggttcagacgatggggatggagagtcatttaacggatct
ccaacaggaagcattaatttatcattagatgatctcagcagtgggagcgtggatgagtct
gttcagcttcatgcctttatctctgatacggctgatgcttttctaaaccaacttcctgtg
gcaggcgtgtgtaacgatcacgggaagacgtacgccctctataccatcaccgtcatacgc
aagaactcagacggcagcgaggacatctggaagacgtaccgccgctacagcgatttccac
gacttccacatgcgcatcacagagcagtttgagagccttggtccaattctcaagcttcct
ggcaaaaagacctttaacaacatggacagggagtttttggagaagaggaagaaggacctg
aacgcttatttacagctgctgctgaatcctgagatggtgaaggcctgtcccgtgctgatg
ccctatgtctatgacttcttggagaataaagcctacagcaagggcaaaggagactttgca
cgcaagatggacacgtttgtgaatcctctccggagctccatgcggaatgtgtccaatgcc
gtgaagtcactgccggacagcctggccgagggagtgtccaaagtctcggcggacatgggc
cgcatgtccgagaaacttggccaggatattaaacagtccatatttaaggtgcctccttta
atcgcaaagtctgacatcgatcctgaacactgccgcgtctcggcccagctggacgacaat
gtggatgataatattccactgagggtgatgttgctgttgatggacgaggtgtttgatctg
aaggagagaaatcagtggctgcgcagaaacatcaaaaacctcctacagcagctcatcaaa
gccacgtatggagacaccattaacaggaaaattgtagatcacgtcgactccatgacctca
cctgagcaagtgtccgactatgtgaagagattcagagactcttactggccaaacgggatc
ctcgccgagacgccgccccgcagagacaaaagcttacgcatgaggacgcgagtcgccgcc
aagaccacactcctaggcatcatgccagatgagttgaagcacatcatcggggcggaaacc
acacgcaagggcatcctgcgcgtctttgacatgttccagtaccaaccgctgaaccgccgg
ctggcctacgtgtttctggagggcttcctggagaccttgtttcctcagtacaagttcccc
gagctgttcgtgaagctccactcgcgctcgccgcgcgtactcagatattcacagaaattg
cgcagcttgcacaagaggtga
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