Labeo rohita (rohu): 127181918
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Entry
127181918 CDS
T09007
Symbol
u2af2b
Name
(RefSeq) U2 small nuclear RNA auxiliary factor 2b isoform X1
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127181918 (u2af2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lroh03041
]
127181918 (u2af2b)
Spliceosome [BR:
lroh03041
]
Complex A
U2 snRNP components
U2 related factors
127181918 (u2af2b)
Complex B
127181918 (u2af2b)
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Transformer
Motif
Other DBs
NCBI-GeneID:
127181918
NCBI-ProteinID:
XP_050992885
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All DBs
Position
19:24911055..24920028
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AA seq
476 aa
AA seq
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MSDFDEFERQLSENKQGDSLNGHERDKENRHRRRSPSRSRSRERKRRSRERRSRERRSDS
KDRRHRRSDHTQNHPQENVSRSPHREKKKIKIKKYWDVPPPGFEHITPMQYKAMQAAGQI
PATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLG
GLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLP
GMSENPSVYVPGVVSTVVPDSIHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSAT
GLSKGYAFCEYVDVNINDQAIAGLNGMQLADKKLLVQRASVGAKNATLTSINETPVTLQV
PGLMTNPMVQMGGVPTEVLCLMNMVAPEELLDDEEYEEIVEDVRDECSKYGQVKSIEIPR
PVDGLEIPGTGKIFVEFTSVFDSQKAMQALTGRKFANRVVVTKYCDPDAYHRRDFW
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgatgaatttgagagacagctgtctgaaaacaaacaaggtgacagtctg
aacggccatgagcgggacaaagagaaccggcaccggcgacgcagcccatcacgcagccgc
agtcgtgagaggaaaaggagaagcagagagaggagaagtagggaacgccgcagtgacagc
aaggaccgccgccatagacgcagtgatcatacacagaaccatccccaagaaaatgtcagc
cgttctcctcaccgggagaaaaagaagataaaaatcaagaagtactgggatgtaccgcct
cctggctttgagcatattacacccatgcagtacaaggcaatgcaagctgctggtcagatc
cccgctaccgctttgctgcccaccatgacgccagacggcctggcagtaacgccgacccca
gtacccgtagtgggcagtcagatgactcgccaggctcgcagactttacgttggcaacatc
ccatttggcatcacggaggaatctatgatggactttttcaatgcccagatgagactcggc
ggtctgacgcaggccccaggaaaccctgtcctcgccgtccagattaaccaggacaagaac
tttgctttccttgagttccgatcggtggatgagaccacgcaggccatggcatttgatggc
atcatcttccaggggcagagtttaaagattcgccggccacacgactatcagccattacct
ggcatgagtgagaaccccagcgtatatgtgccgggtgtggtgtccacagttgtaccagac
tctattcacaagcttttcattggtggtttgccaaactatctcaatgacgaccaggttaaa
gagttgttaacctcttttggacctctcaaagccttcaatttggtcaaggacagcgctacc
ggcctctcaaagggctacgctttctgtgaatatgtggatgttaacatcaatgatcaggct
attgcaggactgaatggaatgcagttagcagataaaaagctgctggttcagagggcaagt
gtaggagccaagaatgccacactgacgagtataaatgagactccagtgacgttgcaagtg
cctgggctgatgacgaaccccatggtgcagatgggtggtgttcccaccgaggtcctgtgc
ctgatgaacatggtggctccagaggagctcctggatgatgaggagtatgaggagatagtg
gaggacgtcagagacgagtgctccaaatacggccaggtcaagagcatagagattccccgc
cccgtcgatggcctcgagattcctggaaccggcaagatctttgtggagttcacatctgtt
ttcgactcccagaaagccatgcaggccttaacggggagaaagttcgccaacagggtggtg
gtgaccaagtactgcgatccagatgcttaccaccgccgagacttctggtag
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