Labeo rohita (rohu): 127182007
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Entry
127182007 CDS
T09007
Symbol
zc3h12ab
Name
(RefSeq) ribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127182007 (zc3h12ab)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
127182007 (zc3h12ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
127182007
NCBI-ProteinID:
XP_050993034
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All DBs
Position
19:complement(27921664..27932158)
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AA seq
641 aa
AA seq
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MSAEISTIPALQLYLDSFWSSHSSDINTTNAWETAPTFLYNPPVSSSVRMDPAQSSPTPD
ESSELGSSAEFQAQLDLFLKLGFSQTQVRAAFLKLGLNADTNRVLGELIQAAGESEEREE
RTASPVLVSRGDASSKVRSAQNYCHNTPAVTSTSEELGEDEDALRPIVIDGSNVAMSHGN
KEVFSCLGIQLAVNFFLERGHVDITVFVPSWRKEQPRPDVPITDQHILRELERRKLLVFT
PSRRVAGKRVVCYDDRFIVKLAYDSDGIIVSNDTYRDLQGERPEWKRFIEERLLMYSFVN
DKFMPPDDPLGRHGPTLDNFLRKTPRIPKKQPCPYGKKCTYGIKCKFSHPERTKQSQRSL
ADELRDKAKISSTPHKTQPVSSQSPSLEEVMEQKLSLDTGSLKKSYASENVLVIKAAPQP
TQRKFPSKKERRPSPTNLDSFPNGSQERLDSGLGSYECHSPESSHSDRYCDNRKSKPSSS
GRHRYVPPNSQPCSCCSYQSLSTGGTGQHHSIGLPSSPNPAYSQPRYHSYGGGPVYPPVN
MSQYSFPQSRGPPPQQGYWSDHYGGYPPASHNAMHPERGQGHWSPSNHNPQWSEREQVRK
KLLAIFNARLVDRAMDMFPYLLDPQRLAAEILTLQSQDGAF
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgaaatcagcaccatccctgcgttacaactgtatttggattccttttggtca
tcccacagctctgacataaacaccaccaacgcatgggaaacagcacccacatttttgtac
aaccctcccgtttccagtagcgttagaatggacccggcccagtccagcccgactccagat
gaatcctcagaactgggctcatctgctgagtttcaggcccagctcgacctgttcctcaag
ctggggttttcccaaacgcaggtccgtgccgctttcctgaaactcggcctcaacgcagac
accaacagggttttgggtgagctgatacaagctgctggggaatcagaggagagagaggaa
cgtacagcctccccggtgctggtttcacgtggggatgcttccagtaaggtccgaagtgcc
caaaattactgtcataacactccagctgtgacaagcacttcagaagagctgggagaggat
gaggacgcgctcagaccgattgtcattgatgggtctaatgtagccatgagccacgggaac
aaggaagttttttcctgtctgggaattcagttggcagtaaacttcttcctggagcgaggt
cacgttgatatcacagtgtttgtgccttcctggagaaaagagcagccgcgacctgatgtg
cccattacagatcagcacattctgcgtgaattagagcggaggaagctcttagtgttcaca
ccgtccagaagggtggctggaaaacgtgtggtttgctacgacgaccgctttatcgtgaag
ttggcgtacgattctgacggcatcattgtatccaacgacacttaccgagatctccaagga
gaacgtcctgagtggaagcgttttatagaggagaggcttctgatgtattcgttcgtgaat
gacaagtttatgcctccggatgaccctctaggaagacatggacccaccctagacaacttt
ctgaggaagactccacgtattcctaagaaacagccttgtccttatggaaagaagtgcact
tatggaatcaagtgcaagttcagtcatccagaacgaaccaagcaatcccagcgttccctg
gctgacgagctccgagacaaagccaaaatttcatccacgccacacaaaactcagccggtt
tccagtcagagtccgtctttggaggaagttatggaacagaaactctccctggacactgga
tctctcaagaagagttatgccagtgaaaacgtcctcgtcattaaagcagccccccagccg
actcaaaggaagtttccttcgaaaaaagaacgtcggccttcgccaacaaatctagattcc
tttcccaatggatctcaggagcgtttggattctggcttgggatcctacgaatgccattct
cctgaatcttcccattctgatcgctactgcgacaacaggaagtccaaaccatccagcagt
gggcggcatcgctacgttccgcccaatagccaaccctgcagttgctgttcctaccagtcc
ctcagcaccggtggaaccggtcagcaccatagcattggtctgcccagctcaccaaaccct
gcttactcccaaccccggtatcactcctatggaggaggtccagtttacccacctgttaac
atgtcccagtattcatttccacaaagcagagggcctcctccccaacagggctactggtct
gaccattatggtggctatcctccagcatcccacaatgccatgcatccagagagaggacaa
ggacactggtcaccttccaatcacaatcctcagtggtctgaacgggagcaagtgaggaag
aaattacttgcaattttcaacgcacgtttggtggacagagccatggacatgttcccatat
ctcctggacccacaaagactggccgcagagattttgacccttcagtctcaggatggggct
ttttaa
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