Labeo rohita (rohu): 127182030
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Entry
127182030 CDS
T09007
Symbol
grin2da
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04020
Calcium signaling pathway
lroh04080
Neuroactive ligand-receptor interaction
lroh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
127182030 (grin2da)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127182030 (grin2da)
04082 Neuroactive ligand signaling
127182030 (grin2da)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lroh04040
]
127182030 (grin2da)
Ion channels [BR:
lroh04040
]
Ligand-gated channels
Glutamate (ionotropic)
127182030 (grin2da)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
BTK
Motif
Other DBs
NCBI-GeneID:
127182030
NCBI-ProteinID:
XP_050993073
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All DBs
Position
19:25065967..25130807
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AA seq
1818 aa
AA seq
DB search
MTPWGPANVIWLAVNESSPGSLLLQLCELLATTPLQGLVFEEEKPPPPNRAPLAPMLEFV
SAQTGVPVIAVGGGAGLGREPQESGSVYLQFSCSTGLQLEVIFEVLEEFDWTAFSVVTTR
HHGYEDFLAMVEGMIDGSFIGWERKSVVMLNLTDDPGGARTRRLLKENEAQVRLLYCSQE
EAEHIFRAAWASGQATPSHMWFAVGPGLSGLGLEGLPKALFAVRPQGWRDEPRRRIAKGV
SVLTHGAMALRREYAGARGTSFAGNCVMDGNQTQRVPDRIRFFSNITLSGRDYSFNNDGY
LANPLLDVISYTAGRGWEEVGWWENGVLRLRYPPWSRYGPFLKPLDDSQHLRVVTLEERP
FVIVEPADPGTGSCIRDSVPCRLPLNNSMVVEGIQSMKHCCKGFCIDVLKRLAKIVGFTY
DLYLVTNGRHGKNIDGEWNGMVGEVVSKRADMAIGSLTINEERSEVVEFSVPFVETGISV
MVSRSNGTVSPSAFLEPYSPAVWVMMFVMCLSVVAVTVFIFEFFSPVGYNRSLQSGKKAG
GSKFTIGKSIWLLWALVFNNSVPVENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQ
EEYIDTVSGLSDKKFQQPTEQYPPLRFGTVPNGSTEENIRSNYPNMHQYMVRNNQRGVEE
AIDNLKTGKLDAFIYDAAVLNYMARKDEGCKVMTIGSGKVFATTGYGIALHKNSRWKRPL
DLALLQLVGDDEIDMLERLWLSGICHNDKIEVMSSKLDIDNMAGVFYMLLVAMGLSLLVF
AWEHLVYWKLRHCLGRSGGLDFLLAFSRGMYSCCNFEDETAPGGSQSTLPQYHHVSTVPP
PPPPHVISTAMPNPPIAMAQQQQQQQQQQKQHHQQPPPVYSALLPGSPPSGGHSGMALGP
SNSPILGAPMPCSTFLPRHDRRLAVVDRWTRPKVGPEKPGGVSSGITDLSQFQGMPPHWG
PGISGGEGGLDEYKRYYGPIDPEGLGVSAEPQNVGTQTPKAKHRGTKSTGNPRLPPKGQA
SGHLPINPALQHPSPPQQSMWRRSSFSKRKGSGGPLYENILPLGRRGGGRYGMRDGGGRR
GRRPPPLPLPIPVPLSSPTQTPPSPSPSICYTSTSSSSSSTSSSSSSSESVSRSNSPSSS
SSYTSSQSFRYRADVRDVYEEYDTDELTEESSLLLGRRKSRSRMSSRSLPSSPPPPPIPP
RKPCGQRAQVRDRAGSQIAQLQEWWASWGEKEKGRRAAGDRDVKEEKRHHKERERERKRR
KKGRKKKKREERERERERKRRKVKKKKKKEEKSRRREREKRSEQEEVDMDRKDVFEKGIV
QEYSSYPALRRSSFRKKSESSTRSYEWDIIRDGVKRDRDDQGGEDEEGSRGKERHQRSPK
SQRQSRPRSNNKHFSSSNKPPSTVKFWSSGNPTSDSPSSFVPLLPISKRRKSVGTERDER
GRGGESRPLLGKNKRVKPCSREGLSFHEWDSEEEEDEESEVERSRPEEQGRRRESRGMDS
ESERDREKTVEIYTDDEGSSGEFGKFERYWEGHEGRAVGGIGGGGWFFGTYPARERGGSI
NSRDDSFLGWGGGEGSFGFGAGAGWGSGGLGSNQWPPTPLTPPPPRRYWSVDKLPVKTEK
KSKSRSQEKSRAHTSCSCQSPHHSASTHSKWNRVTSRSQEELLPHCHSFSSSVRPKRQSS
KPDRAQSQAKSGSQSNLSAQRPQRSDRSRQQPSPPQSLPPSLPPPMVPALPAPPSSSHHI
HVPPPTSSSSVSSPSVVSSTPGAPQPSSLSSSSAKLQYQKLRSVPQPQRYQSPHLPLKTK
SLCSRRGSAHFSSVESEV
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgtggggacccgcgaacgtgatctggttggccgtcaacgagagcagtcctggg
agcctcttgctacaattgtgcgagttactggctaccactccgctacaaggccttgtgttt
gaggaagagaagccaccaccgcccaatcgggcaccgttagcacctatgctggaatttgtc
tcggcccagacgggagtgcctgtgattgctgtaggaggaggggctggcttggggagggag
ccacaggagagcggctccgtctacttgcagttctcgtgctccactggcctgcagctggag
gtcatttttgaagttctggaggagtttgattggacggctttttctgtggttaccacacgc
caccacggctatgaggacttcctggccatggtagagggcatgatagatggctccttcatc
ggctgggagagaaagagcgtggtgatgctcaacctgactgatgacccgggaggggctcgc
acacgcaggctgctaaaggagaatgaagcacaggtgcgactgctatattgctcacaggaa
gaggcggagcacatttttagggctgcatgggcatcagggcaggctactccctcacatatg
tggtttgcggtgggcccaggtctgtctggactcggtcttgagggtttacccaaggctctg
ttcgctgtgcgaccacagggatggagggacgagccacggcggcgaattgcaaagggtgtg
tcggtactgacacacggtgctatggctttacgtagggagtacgctggggcccgagggaca
agcttcgctgggaactgcgtgatggatggaaatcaaacacagagggtaccagacagaatc
aggttcttcagtaacataactctatccggacgggactattcctttaataatgacggttat
ctggcaaatccactcctggatgttatctcctacactgcaggaagaggctgggaggaggta
ggttggtgggaaaatggagtgctgcgcctgcgttacccgccctggtcccgttatggcccg
tttctcaaacctctggatgactcccagcacttgcgtgtggttactctggaggagaggcca
ttcgtcatcgtagagcctgctgatcctggaacgggctcctgcatcagagactctgtgccg
tgccgtctgccgctcaacaacagcatggttgttgagggcattcaatccatgaagcactgc
tgcaaaggcttctgtattgatgttctcaagcgcctggctaaaatagtgggcttcacctat
gacctctatctggtgaccaatggcaggcatggaaagaacatagatggagagtggaatgga
atggtcggggaggtggtgtccaagcgggccgacatggcgatcggctccctgactattaat
gaagagaggtcggaggttgtggagttctctgttccgtttgtggagactggcatcagtgtc
atggtctctcgtagcaatggcacggtgtcaccatctgctttccttgagccatacagccca
gctgtgtgggtgatgatgttcgtcatgtgcctgtctgtggtagctgtgaccgtcttcata
ttcgagttcttcagccctgtcggatataaccgaagcttacagagtgggaagaaggcagga
ggttcaaagttcaccatagggaagtctatctggctgctctgggctctggtgtttaataac
tctgttccggtggaaaacccacgaggcaccaccagtaagataatggtgttggtctgggct
ttctttgctgtcatcttcctggccagctacactgctaacctggctgctttcatgattcaa
gaagagtacatcgatacggtgtctggcctcagtgacaagaagtttcagcagcctacagag
cagtatcctcccttacgcttcggcaccgtcccaaacgggagtactgaggaaaatatacgg
agcaattaccccaacatgcatcagtacatggtgcggaacaatcagagaggagtggaagag
gccatcgacaaccttaaaaccgggaaactggatgcattcatatatgatgcggctgtcctg
aactacatggctcgtaaggacgagggttgcaaagtaatgaccatcggctctggcaaagta
ttcgcaacaacaggatatggcattgccttacacaaaaactcccgctggaagcggccacta
gaccttgccctcctgcagttagttggagacgatgagattgacatgcttgaacgactctgg
ctgtctgggatctgccataatgataagattgaggtgatgagttccaaactggacatagac
aatatggcaggagtcttttatatgcttctagttgcgatgggcctaagtctgctggtgttc
gcatgggagcatcttgtctattggaagctccgccactgtttgggccgctctggaggattg
gacttcctactggcttttagtcggggaatgtacagctgctgcaattttgaggatgaaaca
gctcctggaggttcccaaagcacacttcctcagtatcatcatgtctccacagttcctcct
cctcctccgcctcatgttatctctacagccatgcccaatccccccatcgctatggcacaa
caacaacaacagcagcagcaacaacaaaagcaacaccaccagcagccaccaccggtatac
agtgctcttctgcctggctctcctccttcaggtggacattccggaatggctctagggcca
tcaaacagtcccattcttggagcacccatgccttgctctacattcctaccacggcatgat
cgtcgattagctgtagtggatcggtggacacgtccaaaggtgggccctgagaagcctggc
ggtgtaagcagtgggataacagacttatctcaattccaaggcatgcccccacactggggt
ccaggaataagtggaggagaggggggtctggatgagtacaagagatactacggcccaatt
gatccagaaggcttaggggtctctgctgaacctcaaaacgtaggcacccaaactccaaaa
gctaagcatcgagggacaaaatccactggaaacccgcggttacctcctaaaggtcaagcc
tctggacacttaccaattaaccctgctttgcaacatccctctccacctcagcaatctatg
tggaggagaagcagcttctcaaaaaggaagggctcagggggaccactctacgaaaacatc
cttccactcggaaggagaggtggtggcagatatggaatgagagatggcggtgggagaaga
ggacgtcgtcctcctccccttcctctgcctatacctgtgcccctctcttccccaacacag
actccgccttcaccttctccatccatatgctacacatccacttcctccagcagctccagc
acctccagttcatcctcttcttcagaatcagtctcccgatccaattctccttcttcttca
tcctcgtacacatcatcacagagctttagatatcgtgcagatgtacgagatgtgtacgag
gaatatgacacagatgagctaacggaggagtcaagcttgcttttagggaggagaaaaagt
cgttcacgtatgtcctctcgatccctgcccagcagtcctccgccaccacctataccaccc
cgcaaaccttgcggacagagggcgcaggtgagagacagagcaggcagccagattgcacaa
cttcaagagtggtgggcctcttggggagagaaagaaaagggtagaagagcagcaggagat
agagatgttaaggaggagaagcgacatcataaagaaagggaaagagagagaaagaggaga
aagaagggtagaaagaaaaaaaagagagaagaacgtgaaagagagagggagcgtaaaaga
cgtaaggtgaaaaagaaaaagaaaaaagaggagaaatcgagaagaagggagagggaaaaa
cgatctgaacaagaggaggtagatatggacaggaaagatgtttttgaaaaaggaatagta
caggaatactcttcctatcctgcactgaggcgaagctctttccggaaaaagagtgaaagc
tctactaggagttatgagtgggatattatcagagatggagttaagagagatagggatgat
caaggtggagaagatgaagaaggcagtagaggaaaagaaaggcatcagagaagcccaaaa
tcgcaacgccagtccaggccaaggtccaacaacaagcatttttctagctcaaacaagcct
ccttcaaccgtcaaattttggagtagcgggaacccaacttccgattcgccatcgtctttt
gtacccttgcttcccatatctaaaagacgaaagtcagtaggaactgagagagatgagcga
ggaagaggtggagagagtcgaccccttttgggaaaaaacaagagagtcaagccttgctcg
agagaaggcctgtcatttcacgaatgggattccgaggaagaagaagacgaggagtctgaa
gtggaaagaagtaggccagaagaacaggggcgacggcgagaaagcagaggaatggactct
gaatccgaaagggacagagaaaaaactgttgagatatacacagacgatgaaggttcctca
ggagagtttggtaagtttgaaagatattgggagggtcacgaaggaagggcagttggaggc
attggaggaggaggatggttttttggcacctaccctgccagagaaaggggaggaagtata
aacagtagagatgactcctttttggggtggggtggtggagaaggtagcttcggttttgga
gcaggagcagggtggggatcaggaggcttaggatcaaaccagtggcctccaactccattg
actcccccacctcctcgaagatactggtctgttgataaattaccagtgaagactgaaaag
aaatctaaaagcaggtctcaagagaagagccgagcccacacgtcctgttcctgccagtcg
ccccatcactctgccagcactcactccaaatggaatcgggtgacttctaggagtcaggag
gagctactcccacactgccacagtttcagcagcagcgtgagacccaaacggcaatcatct
aaaccagatcgggctcagagccaggcgaaatctgggagccaatccaacctcagtgcacaa
agaccacagcgctcagaccggtcccgacaacagccatcccctcctcagagtctaccgcca
tctttaccccctccaatggtccctgcactcccagccccaccctcttcctctcaccatata
catgtacccccacctacctcctcttcatcagtttcctccccttcggttgtctcatctaca
cctggtgccccacagccctcctctttatcctcctctagtgctaagctccagtaccagaaa
ctacgatcggttccccaaccccaaaggtatcagtccccacatcttcccctcaaaaccaag
agcctctgctctcgtcgaggctctgcccacttctccagtgtggaaagtgaggtctga
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integrated database retrieval system
