Labeo rohita (rohu): 127182164
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Entry
127182164 CDS
T09007
Symbol
col8a2
Name
(RefSeq) collagen alpha-2(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
lroh
Labeo rohita (rohu)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
127182164
NCBI-ProteinID:
XP_050993260
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Position
19:complement(13907955..13980309)
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AA seq
686 aa
AA seq
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MLTVLCVLLTLGSHALGGGYAPMPQMKYVQPMMKGPVGPPFREGKGQYLEFPPTMDIKGE
PGPQGKPGPRGPAGPPGLPGKPGIGKPGLNGQTGPPGPPGFPGIGKPGLPGLPGKIGPKG
PPGLNGEVGPRGEVGLRGLPGQPGPPGPAGLSLNGKPGLPGTRGPPGTRGEPGPKGGRGI
PGEQGPKGENGNGKPGLIGPRGPNGLQGPPGAPGVPGIGKPGIDGLPGPAGPKGEKGLPG
VQGVPGESGPPGLQGQPGAVGVGKPGLDGAPGNPGPIGPKGEVGPRGTPGFPGSPGYGKP
GLVGQKGDRGPTGLQGAPGDKGQSGMDGLPGDSGPTGQPGLPGPQGPMGLPGKHGMPGLK
GENGPQGPPGLPGLRGDQGPSGLPGKPGLPGDKGLPGLNGATGKPGPKGEPGHIGLPGNP
GLIGGPGSKGENGLTGPPGPRGNSGIPGLPGPTGHMGPQGVPGLKGEQGPPGPQGIGKPG
DKGMPGPQGPPGIAGSPGLNGIQGPPGPPGPPGPPGPSNGDINQLAVQGPNIVGESIPKP
NGEKPYFGQAELSASMAPAFTAILTTPFPPSGMPIKFDRTLYNGQNAYNPATGIFTSPLP
GVYYFAYHVHVKGTSLWVALYKNNVPATYTYDEYKKGYMDQASGSAVLELKENDQVWVQM
PSDQANGLYSTEYIHSSFSGFLLCPT
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgctgacagtgctctgtgtcctgctaacgctggggagtcatgccctgggtggaggttac
gcccccatgcctcagatgaaatatgtgcagcccatgatgaagggacctgttgggccaccc
ttcagagaaggcaagggccagtatcttgagtttccacccacgatggacattaaaggagag
ccaggtcctcaagggaagccaggaccaaggggaccagctgggcctcctggattaccaggg
aaaccaggtataggaaaacctggtctcaatggtcaaacaggtcctccagggcctccagga
ttccctgggattggaaaaccaggactaccaggtttaccaggaaaaataggacctaaagga
cctccaggactcaatggtgaggttggacctcgtggagaggtgggtctacgtggacttcca
ggtcagccaggaccacctggaccagcaggtctgtcgttgaatggtaaaccagggttacca
ggaactagaggcccaccagggacaagaggtgagccggggcctaaaggcggacgtggtatt
cctggtgaacaaggacctaaaggggaaaatggcaatggaaagccaggtttaataggtccc
aggggacccaatggccttcaaggacctccaggagctccaggagttcccgggataggtaaa
ccaggcatcgatgggctgcccggtccagcaggtccaaaaggagaaaaaggacttccagga
gttcaaggtgtcccaggggaatctggtccccctggactacaaggtcagccaggagcagta
ggtgttggaaaacctggacttgatggtgctccaggtaacccaggcccaataggtccaaag
ggtgaggttggccccagaggaactcctgggtttcctggttcccctggctatggtaaacca
gggcttgtaggacagaaaggagacagaggtcctactggattacaaggagcccctggtgac
aaaggacaatctgggatggatggcctaccaggagattcagggccaactggacagccaggg
cttccaggtccacaaggtcctatgggtcttccagggaaacatgggatgcctggtctaaaa
ggagagaatggcccgcaaggacctccaggcttgccagggcttagaggagatcagggtcct
agtgggctcccaggaaagcctggccttccaggggacaagggtcttcctggtctcaacgga
gccacaggcaaacctggacccaaaggtgaaccaggccacatcggactcccaggtaatcct
ggtttgattgggggaccaggttcaaaaggtgaaaatgggttaacaggaccccctgggcca
cgtggcaattcagggattcctggacttccaggtcccaccggtcatatggggcctcagggt
gttccagggttgaaaggcgaacaaggtccaccgggcccccaaggaattggaaagcctgga
gacaagggtatgcctggtccacaaggacctccaggaatagctggctcccctggacttaac
ggtattcagggccctccaggtccacccggacctcctgggcctcccggcccgtcgaatggt
gacataaatcagttagcggttcaaggaccaaatatcgtaggagaatctattccaaagcca
aatggtgagaaaccatattttggtcaggccgagctctctgcctccatggctcctgcgttt
actgccattttgacgacaccatttccaccatcgggaatgccaatcaaatttgacagaact
ctgtacaacgggcaaaatgcttacaaccctgccacgggcatcttcacaagcccattgcct
ggagtctactattttgcttatcatgtacatgtaaagggaaccagcctgtgggtggcactg
tataaaaacaatgtgccagccacgtacacctacgatgaatacaagaagggctatatggac
caggcatcaggtagtgcggtactggagctgaaagagaacgaccaggtttgggtgcaaatg
ccctctgaccaagcaaatggcctctactccactgagtacatccattcgtccttctcaggg
ttcctcctgtgccccacataa
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