Labeo rohita (rohu): 127182172
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Entry
127182172 CDS
T09007
Symbol
yme1l1b
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent zinc metalloprotease YME1L1b
KO
K08955
ATP-dependent metalloprotease [EC:3.4.24.-]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lroh01002
]
127182172 (yme1l1b)
Peptidases and inhibitors [BR:
lroh01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
127182172 (yme1l1b)
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GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
AAA_16
AAA_22
AAA_5
TIP49
RuvB_N
DUF815
Mg_chelatase
FAD-SLDH
AAA_lid_PRS2_C
AAA_33
IstB_IS21
AAA_17
AAA_18
AAA_14
AAA_28
Zeta_toxin
PhoH
nSTAND3
AAA_7
FumaraseC_C
Motif
Other DBs
NCBI-GeneID:
127182172
NCBI-ProteinID:
XP_050993276
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Position
2:8954483..8966898
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AA seq
717 aa
AA seq
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MFSLSTSLQPQVTVQLSHLINALHSLKGSVSSNTSVNHKHRENTSEQDLNCTEPSLTLRD
LGLTDLGVGRLDELVEKLLPCVTQQESLSELRSVPNVWRTSHLSSDSFFHNKNGFSRMGG
VTPVFSKKNKSPLQTLCTDLKYLPLMIPNRGFKTLKSRTRRLQGGFDSSVEPEGFTPSFM
KGLLTRDKGPDVETLDKLLKNKNIPDGQHDAFKTGFAEGFLKAQALTQRTQESLRRTRLI
LLVLLLVGLYGLSKTPFLSVRFRTTSGLDSAVDPVQMKNVTFEHVKGVEEAKNELQEVVE
FLRNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVG
ASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGV
IIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLKKIKVDSAVEAEVIAR
GTVGFSGAELENLVNQAALKAAVDGKDMVTMKELEFAKDKILMGPERRSAEIDKKNKEIT
AYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSMLPENDRWSETRAQLLAQMDVSMG
GRVAEELIFGSENITTGASSDFDSATKIAKMMVTRFGMSEKLGVMTYADLTKQSPETQAA
IEHEVRILLRDSYERAKALLKSRAKEHKSLAEALLRYETLDAKEIQLVLEGKTLNGR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgttttccctttctacttcccttcagccacaggtaacagtccagctgagtcacctcatt
aatgccctgcactctctgaagggttcagtgagcagcaatacttcagtcaatcacaaacac
agagagaacacatcagaacaagatctgaattgcacagagccatcactgaccctcagagat
ttaggtttgacagatcttggggttggccggctagatgagctggtggagaagcttctgccc
tgtgttactcagcaggagtcactctcagaactgagaagtgtgccaaatgtctggaggacc
tcccatctttcatcagattcgttctttcacaacaaaaatggtttttcaagaatgggtggt
gttactcctgtgttctctaagaaaaacaagtcacctctgcaaacactatgtacagatctc
aaatatttgccattgatgatcccaaatcgtggctttaaaactctgaagtccagaacgcgc
cgtctacaaggaggctttgacagttcagtggagcctgagggatttacaccatcatttatg
aagggtttgcttacacgagacaaagggccagatgttgaaacattggacaagctccttaaa
aacaaaaacattcctgatggtcagcatgatgcttttaagactggttttgcagagggattc
ctaaaagctcaggcactaacacagagaacccaagaatcattaagaaggactcgactgata
ctgttggtgcttttgttggtgggcttatatggactctcaaaaacacctttcctatcagtg
cgattccgaaccacatcaggcctggactcagcagtggaccctgtccagatgaagaacgtc
acctttgagcatgtgaagggtgtggaggaggccaaaaatgagctacaggaggtggttgag
tttctccgcaacccacaaaagttcactgttttgggaggaaaactgcctaaaggaatcttg
ttggttgggcctccaggtacaggaaagaccctgttggcccgtgctgtggcaggtgaggca
gatgtgccgttctactacgcatctggctcggagtttgatgagatgtttgttggtgttggt
gccagtcgaatcagaaaccttttcagggaagccaaagctaatgctccttgtgttattttc
attgatgagctggatagtgttggaggaaaaaggattgagtcccctatgcacccttattct
agacagacaatcaatcagcttctagcagagatggatgggtttaagccaaatgaaggcgtc
atcataattggagcaacaaacttccctgaagctttggataatgctctgatccggccaggc
cgttttgatatgcaggtcactgttcccagaccagatgtaaagggccgcactgaaatcctc
aagtggtaccttaaaaaaattaaagtagactctgctgtagaggcagaggtcattgctaga
ggaacggtggggttttctggtgccgagctggagaatcttgttaatcaggctgcgctaaag
gcagctgtggatggtaaagacatggtaaccatgaaggagttggagtttgctaaagacaag
atactgatgggaccggaacgcaggagtgcagagattgacaagaagaataaagagatcaca
gcataccatgagtcaggccatgctattattgcatactacaccaaagacgccatgcccata
aataaagccacgattatgccgagaggccccactttgggtcatgtatccatgcttccagag
aatgaccgctggagtgaaactcgtgctcaacttctggcccagatggatgtcagcatgggc
ggccgagtggctgaggaactcatctttggcagtgagaatatcaccactggagcatcaagt
gattttgacagcgctacaaaaatagccaaaatgatggtgaccagatttggcatgagtgaa
aagttgggtgtcatgacatatgctgaccttaccaagcagagtccagaaactcaggcagcc
attgaacatgaagtcaggatacttctaagggactcctacgagcgtgctaaagcgctcctc
aagtctcgtgctaaggaacacaaaagtcttgcagaggctttactgcggtatgagacgttg
gatgccaaagagatccagctggtcttagagggaaagacattaaacggcagatga
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