Labeo rohita (rohu): 127182313
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Entry
127182313 CDS
T09007
Symbol
vps45
Name
(RefSeq) vacuolar protein sorting-associated protein 45
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127182313 (vps45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127182313 (vps45)
Membrane trafficking [BR:
lroh04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
127182313 (vps45)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
B12-binding
Motif
Other DBs
NCBI-GeneID:
127182313
NCBI-ProteinID:
XP_050993523
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All DBs
Position
19:complement(18508964..18518321)
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AA seq
568 aa
AA seq
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MNVTLAVKQYISKMIESSGPGMKVLLMDKETTSIVSVVYTQSEILQKEVYLFERIDSQNR
DNMKHLKAICFLRPTKENVEHLIQELRRPKYSVYFIYFSNVISKSEIKALAEADEQEVVA
EVQEFYGDFIAVNPHLFSLNLQGVSRGRSWEPSVLPRVTQGLTSVLLALKKCPMIRYQLS
SDMSKRLAESVKQIITKEYELFDFRKTEVSPLLLILDRSDDAFTPLLNQWTYQAMVHELL
GLNNNRIDLSRVPGISKDLREVVLSAENDEFYANNLYLNFGEIGTNIKNLMEDFQKKKPK
DKQKLESISDMKAFVDNYPQFKKMSGTVSKHVTVVGELSRLVSERQLMEVSEVEQELACQ
NDHSSAQQNVRRLLQNPRLSEIDAVRLVMLYALRYEKHSSSILPSLMEELNRKGVSERHR
KMVQAVVEYGGKRVRGSDLITPTDAVSITKQFFKGLKGVENVYTQHQPLLHDTLDQLIKG
RLKDSQFPYLGPSSLRDRPQDIIVFIIGGATYEEALTVYNLNRTMPGVRIVLGGTAIHNT
KSFLEEVMLAVGSGGDRTQGGGRQLSRR
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgactctggctgtcaagcagtacatttccaaaatgatagagagcagcggacct
gggatgaaggtgctgctgatggacaaggagacgaccagtattgtaagtgtggtctacaca
cagtctgagatcctgcagaaagaagtctacctttttgagcgtattgactcacaaaaccgg
gacaacatgaagcaccttaaggcaatctgctttctccggcctacaaaggagaatgtagag
cacctgattcaagagcttcgtcggcctaaatatagcgtctacttcatttatttcagtaat
gtgatcagtaagagtgaaataaaggctttggctgaagcagatgaacaggaagtagtcgca
gaagtgcaggagttctatggagatttcattgctgtaaaccctcatctcttctccctcaac
cttcaaggagtatccaggggtcgcagctgggagcccagtgtactgcctcgtgttactcag
ggtttgacatcagtgttgctggccctgaagaaatgccccatgatccgttatcagctctct
tctgacatgtccaaaaggctggcagagagtgtcaaacaaatcattactaaggagtatgaa
ctgtttgacttcagaaaaacagaagtatctcctcttctcctgattttagacagaagtgat
gatgcctttactccccttctcaatcagtggacgtatcaagccatggttcatgagctactg
ggcctcaataacaaccgcatagacctgtcgagagtgcctggaatcagtaaggacctacgg
gaggtggtcttgtctgcagaaaatgatgagttttatgcaaataacttatacctgaatttt
ggtgagattggaacaaatatcaagaacctgatggaggatttccagaagaaaaagcccaag
gacaaacagaaattagagtccatatctgacatgaaggcatttgtggataattacccacag
tttaagaaaatgtcaggcacggtctccaaacacgtaaccgtggttggggagctgtctcgc
ctggtcagtgaaagacagctgatggaggtgtcagaggtggagcaggagttggcctgccag
aatgaccactccagtgcacaacagaatgtgaggagactattgcagaacccgcggctttct
gaaattgacgctgtgcggctggtgatgctctatgctcttcgctatgagaaacacagcagc
agcattctgcccagccttatggaggagctcaaccgaaaaggggtgtcagagagacaccgc
aagatggtacaagctgtggtagaatatggtggcaaacgagtcagaggaagtgacctcatc
actcctacagatgctgtgtccattaccaaacagtttttcaaaggacttaagggagttgag
aatgtgtacacacagcatcagccgctactacatgacacgctggatcagctgatcaagggt
cgtttgaaggacagccagttcccctatctcgggccaagttctctgagagacagacctcaa
gacattattgtcttcataattggcggggccacttacgaggaggcattgactgtttataac
ctgaaccgcacaatgccgggggtacgcatcgtactcgggggcacagccattcacaacact
aagagtttcctagaggaagtgatgcttgcagtaggttcaggtggtgacagaacacaaggc
ggaggccgtcagctgagccgacgctga
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