Labeo rohita (rohu): 127182372
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Entry
127182372 CDS
T09007
Symbol
rims2b
Name
(RefSeq) regulating synaptic membrane exocytosis protein 2 isoform X1
KO
K15297
regulating synaptic membrane exocytosis protein 2
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127182372 (rims2b)
Membrane trafficking [BR:
lroh04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
127182372 (rims2b)
Small GTPases and associated proteins
Rab associated proteins
127182372 (rims2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
FYVE_2
PDZ
PDZ_6
TPR_Nup160_C
IBR
Motif
Other DBs
NCBI-GeneID:
127182372
NCBI-ProteinID:
XP_050993615
LinkDB
All DBs
Position
19:complement(3836330..4022683)
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AA seq
1645 aa
AA seq
DB search
MSARGAPAASPAAPAPPDMPDLSHLTEEERKIILSVMERQKKEEEKEQSMLKDPPKEDTK
PQPAQWNPFSGITELVSNVLQPQSKSPSEEQPNPKLHQQFEMYKDQVKKIGEEAQKNPEQ
KGDSPTCGICHKTKFADGCGHVCSYCQTKFCARCGGRVSLRSNKVMWVCNLCRKQQEILT
KSGAWFYSGPEGSRSGPQAKVRGGPAGTNQDPLRNGSGIPDRNRSPSASRDPSAAYNQRE
GEGGLQYAPAEGGMPRSPSDYGRDPGRSPRSSRMYNEVGGYQDSRGRWHSQGQRLDGQLD
DYELQRRREEEYQARYRSDPNLARYPVKPQPYEEQMRIHAQVSRARHERRHSDVSLAYTE
LDEPLHGPGGRQSRLPLLGGPSQRSYSMDRSSPGHRMSNHSPPTPHRSPVLGDSRRGLAE
PTRKPIPQQHHLDPSSAMRRNKRDKMDSMLRNDSLSSDQSESVRPPPPRPHRSKRLGKLR
TMGSFSSSEEELATTPEYTSCEDVELESESISEKGNIQRGKRKTNEQAYFLDASYAPSER
QKTVVRFWERSHDEDAEWCEPQVKDSGVDTCSSTTLNEEHSHSDKHPVTWQPSKDGERLI
GRIVLNKRMKDGTVPRDTGALLGLKVVGGKMTESGRLCAFITKVKRGSLADTVGHLRPGD
QVLEWNGRVLQGATFKEVYNIILESKPEPQVELVVSRPIGDVPRIPESTHGQLESSSSSF
ESQKMGPSISVTSPMSPGMLRENPQYLSGQLSSPCLSRRTTPFVPRVQVKLWYDKVGHQL
IVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKSKRRTKTVKKSLEPKWNQTFMYSPVH
RREFRERMLEITLWDQARVREEESEFLGEILIELETALLDDQPHWYKLQTHDLSSMPLPN
PSPYMQRRLLHGESPTRRLQNKGPYFYNSGSQRISDSEFSDYDCEDGIGVISDYRHNGRD
FQSSTLSVPEQVMSSNHCSRSDMIRTRSRSPSVPPPQSRSLDHGVRGGPSLYGPRHRLSE
DRYSPDSQYLTLPPRTRHRQPTVDPAVQDPSMYPLYREDAVRLLRSTRTARAYSDGAYNS
LDRRMRRDRQMSAYSDSYESPERYYNGPNHLSTPWPNHVMNGTSGDYRTCPRIEIEPSTD
TEREDNIPEFPANHEHYEEDLRANIRTGSVQTSPTSTPVSSRRGRQLPQVPPKGSMDRTH
APPPPASVPPPPAPPPAPSPAPPAAAAAAPSSSSPLVQQASVPESEEKPVAPPPVNGRKE
VTWEDQQKKAPAVVSESTVSENGDAGTLKDPSRRGMDNLSMRSSDSDVSDVSAMSSASRL
SSTSYMSVQSERVRASRRISEFTSKMKHRAQTATPGSNITKSSSVGGDMCSLGRNDEDED
DKKRRSSFGAKMAAMVGLGKKSQSTSQLDPEEEGKKKKPVRLAIQRSVETGLAIEMKSRM
TRQPSRETTDDGEKAKPGNLIFPGVKISSDSQFTEFLDGLGPAQLAGRQTLATPPMGDIQ
IGMVHRKERLDVEVIRARGLVGKPGNKQTPAPYVKVYLLDNGKCINKKKTRTARKTLDPL
YQQQLQFEENPEGKVLQIIVWGDYGRMDHKSFMGATQILLDDLELTNMVIGWYKLFPPTS
LVDPTLAPLSSKPPDSGLDSSNVRS
NT seq
4938 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctcggggggccccggccgcgtcccctgcggctcccgctccgccggacatgccg
gacctgagccacctcaccgaggaggagaggaagatcatcctctcggtcatggagcgccag
aagaaagaggaggagaaagagcagtccatgctgaaggatccacctaaagaagacacaaag
cctcagccagctcagtggaaccctttcagtggaatcactgagctggttagtaatgttctc
cagccccagtcaaagtcccccagtgaggagcagccgaatccaaaactgcaccagcagttt
gagatgtacaaggaccaggtgaagaagatcggagaggaggctcagaagaatccggagcag
aagggagactcgcccacctgtgggatctgccacaaaaccaagtttgccgatggctgcggc
cacgtctgttcttattgccaaaccaagttctgcgcacgctgtggaggacgcgtctccctc
cgctccaacaaagtaatgtgggtatgcaacctgtgccgaaaacaacaagaaatcctcacc
aagtcgggagcgtggttctacagcggtcctgagggctccagatcagggccccaagccaaa
gtaaggggaggcccagccggaacaaaccaggaccctctcagaaacggttcagggatccca
gacagaaacagaagcccatcagcatccagggatcccagcgcggcgtataaccaaagggag
ggggaaggaggattgcagtatgccccggctgaaggtggcatgccccgctctccgtccgac
tacggacgtgaccctggccgttcgccgaggagttcaagaatgtacaatgaggtgggcggt
tatcaagacagtcgaggacgctggcactcgcaaggccagcgtttggacggccagctagac
gactatgaactccagaggcgccgtgaggaggaataccaggcccgataccgcagcgacccc
aacctggcacgctacccggtcaaaccccagccctacgaggagcagatgcgcatccatgcc
caggtgtcacgggctcggcacgaacggcgccacagcgacgtctcgcttgcctatacagaa
cttgacgagcctctgcatggcccaggtgggaggcagtcgcgcctccctctattgggaggc
ccaagtcaacgctcgtattctatggacaggagctcaccgggacatcggatgtcgaatcat
agcccaccaacaccacaccgtagccccgtgttgggcgacagccggcgaggactggcggag
ccaacgaggaaacctataccccaacagcaccacttggaccctagctcagccatgcgcaga
aacaaacgggacaaaatggatagtatgctacgaaatgactctctaagctcagaccaatcc
gagtcggttcgacctcctccacctcgaccgcaccgcagcaaacgccttggcaagctccga
accatgggcagcttcagtagctcagaggaggagctggccactacgccagagtacaccagc
tgtgaggatgtggagctggagagtgagtccatcagtgaaaaaggcaacattcaaagggga
aaaagaaaaacaaatgagcaggcgtattttttggacgccagttatgccccgtctgagagg
caaaagacagtggtgcgattttgggagcgctcccacgacgaagacgcagagtggtgcgag
ccgcaggtcaaagattcaggggttgacacgtgcagtagcaccacgctaaacgaggagcat
agccatagcgacaagcacccggtgacatggcagccatccaaagatggagagcgcctaata
gggcggatagtgctaaacaagcggatgaaagatggcacggtgcccagagacacgggggca
ctgctgggcctcaaggtggtgggagggaagatgacagagtctggcagactttgtgctttc
attacaaaggtgaagagaggaagtctagcagacactgtcggccatcttcgaccaggtgat
caggtcctggagtggaacgggagggtcttacagggagccacattcaaggaagtttacaat
atcattctagaatccaagccagagccgcaggtggagttggtggtctcacggcctattgga
gatgtccctagaataccagagagcacacatggacaacttgaatcaagttcaagttccttt
gaatcccaaaaaatgggtccctccatttctgtcacgtcccccatgagtcccggcatgctc
cgggaaaaccctcagtatctatccggacagctctcaagtccatgccttagtagaagaacc
acgccttttgtccctagggtccaggtcaagctgtggtatgataaagtaggacatcagctc
attgtcaccatcctgggcgccaaagacctgccttcacgagaagacgggcgacctaggaat
ccatatgtcaaaatctacttcctccccgacagaagcgataaaagcaagaggagaacgaaa
acagtgaagaaatctctagagcccaagtggaaccagacgttcatgtactcgccggtgcac
agacgagagttcagggagcgcatgctggagatcacgctatgggaccaggccagagtccga
gaggaggagagcgagttcctgggagagattctgatcgagctggagacggcgctgttggac
gatcagcctcactggtataagctccaaacacacgacctgtcctccatgccgctgccgaac
ccctcgccctacatgcagagacgcctcctacacggagagagcccgacacgcaggttgcag
aacaagggcccgtatttttacaactcagggtcacagagaatcagtgacagtgagttctct
gattacgactgtgaagacgggattggtgttatctcagattaccggcacaatggcagggat
ttccagagctccactctgtccgtccctgagcaggtgatgtcgtccaatcactgttcccga
tcagacatgatccgcacacgctcacgctcgcccagcgtccctccaccgcaaagtcgaagt
ttagaccacggtgtgagaggaggaccctcgctttacggcccccgacatcgcttgtctgaa
gacagatactcaccagacagccagtatcttaccctccctcctcgaaccagacacagacag
ccaaccgtcgaccccgctgtccaggaccccagtatgtaccccctctatcgggaagatgct
gtcaggttactgcgctccactaggacggcccgtgcgtactcagatggggcatacaatagc
ttggacaggaggatgagaagagatagacaaatgtctgcctacagtgactcatatgaatct
cctgagagatattacaatgggcccaatcatttatctactccatggcccaatcatgtcatg
aatggaaccagtggagactacaggacgtgccccaggatagaaattgagccttctacagat
acagaaagagaggacaatatcccagagttcccggctaaccatgagcactatgaggaagat
ctgagggcaaatatccgtaccggatcggtccaaacaagtcccaccagcacgccagtttcg
agtcgaagaggtcggcagctaccgcaagtcccaccgaagggctctatggacagaacgcat
gctcctccgcctccagccagtgtccctcctcctccagctcctccccctgctccctcccca
gctcctcctgctgctgctgctgctgctccatcatcatcttcaccgctcgtccagcaggct
tctgtgccagaatccgaggaaaagcctgtagctcccccacctgtcaatgggaggaaagag
gtgacatgggaggaccagcagaagaaagctcctgctgtagtgtcagagtcaacagtgtca
gagaatggagatgcaggcactttgaaggatccatcaaggcgtgggatggacaatctctcc
atgaggtcttcggacagtgatgtaagcgacgtgtccgctatgtcgagcgcgtctcggctt
agcagcacgagctacatgtctgtacagtcagaaagggtgcgagcgagccgcaggatcagt
gagtttacatctaaaatgaaacacagggctcagacggccaccccaggctccaacatcacc
aagagctccagtgtgggtggagacatgtgctcgctgggcaggaacgatgaggacgaggac
gacaaaaagaggcgctccagcttcggagccaagatggctgccatggtgggactggggaag
aagagtcaaagtacctcccagctggacccggaggaggagggtaagaagaagaagccagtg
cgtctggccatccagcgaagcgtggagactggtttagccatcgaaatgaagagcaggatg
acacggcagcccagccgagagaccacagatgacggtgaaaaggcgaagcctggaaatctt
atctttcctggagtgaagatctcttcagacagccagttcactgaatttttggatggtctt
ggccccgcccagctggcagggagacagacattggccacgcctccaatgggtgacatccag
attggtatggtgcacaggaaggagaggctggatgttgaagttattcgggctcgaggtctg
gtgggcaaaccagggaacaaacagacgccagcaccatatgtaaaagtgtacctgctggac
aacgggaagtgcatcaacaaaaagaaaacacggacggcgagaaaaacgttggatcctctt
tatcaacaacagcttcagtttgaggagaatcctgaggggaaggttttacagatcattgtt
tggggggactatggacgcatggaccacaaatccttcatgggagccacccagatcctctta
gacgatttggagctgaccaacatggtgattggctggtacaagctcttccctcccacctca
ttagtggacccaactttggcaccattaagtagtaaacctccagattcaggcctggacagt
tccaacgttcggtcgtag
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