Labeo rohita (rohu): 127182389
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Entry
127182389 CDS
T09007
Symbol
cthrc1a
Name
(RefSeq) collagen triple helix repeat-containing protein 1a
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lroh03037
]
127182389 (cthrc1a)
Cilium and associated proteins [BR:
lroh03037
]
Other cilia and associated proteins
Stereociliary proteins
127182389 (cthrc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
127182389
NCBI-ProteinID:
XP_050993639
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All DBs
Position
19:complement(4044195..4052634)
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AA seq
232 aa
AA seq
DB search
MMGTKLAQLLICFWITLPCCVTEKVKERTGRQRDAEFTDKYQTCMQGVPGVQGRDGNPGI
NGIPGTPGIPGRDGLKGEKGECVTERFEESWKPNFKQCAWNSLNYGIDLGKIAECTFTKQ
RSDSALRVLFSGSLRLKCKTACCQRWYFTFNGAECTGPLPIESIIYLDQGSPELNSTINI
HRTSTVEGLCDGIKAGLVDVGIWVGTCADYPRGDASTGWNSVSRMIIEELPK
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgatgggtactaaactggcgcaacttctcatttgcttttggataactttgccatgctgt
gtcacggaaaaagtcaaagaaaggaccggccggcaaagagacgcggagtttacagacaag
taccagacgtgcatgcagggtgtacctggagtgcagggcagggatggcaacccagggata
aatggcattccaggcaccccaggaatccctgggagagacggacttaaaggcgagaaggga
gagtgtgtgactgagaggtttgaagagtcctggaaacccaacttcaaacagtgcgcctgg
aattctttaaactacggcattgatctgggcaaaatagctgagtgcacgttcaccaagcag
cgttcggacagcgctctacgtgtgctcttcagtggttctctcaggctcaagtgtaagacg
gcctgctgtcagcgctggtacttcacttttaatggggccgaatgcactggaccgttaccc
atagagtccatcatttacctggaccagggcagtcctgaactcaactccaccattaacata
cacaggacctccacagtggaggggctctgtgacgggatcaaggccgggctggtggatgtt
gggatatgggtgggcacatgtgctgattatccccgtggagacgcatcaacaggatggaac
tctgtatcccggatgatcattgaagaacttccaaaatga
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