Labeo rohita (rohu): 127182414
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Entry
127182414 CDS
T09007
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127182414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127182414
03016 Transfer RNA biogenesis [BR:
lroh03016
]
127182414
03012 Translation factors [BR:
lroh03012
]
127182414
04131 Membrane trafficking [BR:
lroh04131
]
127182414
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127182414
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
127182414
Transfer RNA biogenesis [BR:
lroh03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
127182414
Translation factors [BR:
lroh03012
]
Eukaryotic type
Elongation factors
127182414
Membrane trafficking [BR:
lroh04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
127182414
Exosome [BR:
lroh04147
]
Exosomal proteins
Proteins found in most exosomes
127182414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
127182414
NCBI-ProteinID:
XP_050993672
LinkDB
All DBs
Position
19:19162783..19166089
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAGGV
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSQARFEEITKEVSAYIKK
IGYNPASVAFVPISGWHGDNMLEPSTNMGWFKGWKIERKEGNASGVTLLDALDAIMPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPANVTTEVKSVEMHHESLA
EATPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPQEAGSFNAQVIILNHPGQISQGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKALKSGDAAIVEMIPGKPMCVESFSTYPP
LGRFAVRDMRQTVAVGVIKSVEKKVGGSGKVTKSAQKAAKTK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagacccacattaacatcgtggttattggccacgtcgactccggaaag
tccaccaccaccggtcatttgatctacaaatgcggtggaatcgacaagagaaccatcgag
aagttcgagaaggaagccgctgagatgggcaagggctccttcaagtacgcctgggtgttg
gacaaactgaaggccgagcgtgagcgtggtatcaccattgatatcgctctctggaaattc
gagaccagcaagtactacgtcaccatcattgatgcccctggacacagagacttcatcaag
aacatgattactggtacttctcaggctgactgtgccgtgctgattgttgctggtggtgtc
ggtgagttcgaggctggtatctccaagaacggacagacccgtgagcatgccctcctggct
ttcaccctgggagtgaaacagcttatcgttggagtcaacaagatggactccaccgagccc
ccttacagccaggctcgttttgaggaaatcaccaaggaagtcagcgcctacatcaagaag
atcggctacaaccctgccagtgttgccttcgtcccaatttctggatggcacggtgacaac
atgctggagcccagcacaaacatgggctggttcaagggatggaagattgagcgtaaggag
ggtaacgctagcggtgttactcttcttgatgccctggatgccattatgcctcccagccgt
cccaccgacaagcccctccgtctgccacttcaggatgtctacaaaattggaggtatcgga
actgtgcccgtgggtcgtgtggagactggtgtcctcaagcctggtatggttgtgaccttc
gcccctgccaatgtgaccactgaggtcaagtctgttgagatgcaccacgagtctcttgct
gaggccactcctggtgacaacgttggcttcaacgttaagaacgtgtctgtcaaggacatc
cgccgtggtaacgtggctggagacagcaagaacgacccccctcaggaggctggcagcttc
aatgctcaggtcatcatcctgaaccaccctggtcagatctctcagggctatgccccagtg
ctggattgccacactgctcacattgcctgcaagtttgctgagctcaaggagaagatcgac
cgtcgttctggcaagaagcttgaggacaaccccaaggctctcaaatctggagatgctgcc
attgttgagatgatccctggcaagcccatgtgtgtggagagcttctctacctacccacct
cttggtcgctttgctgtgcgtgacatgaggcagaccgtcgctgttggtgtcatcaagagc
gttgagaagaaagtcggtggttccggcaaggtcacgaagtctgcacagaaggccgccaag
accaagtga
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