Labeo rohita (rohu): 127182477
Help
Entry
127182477 CDS
T09007
Symbol
trim54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127182477 (trim54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127182477 (trim54)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127182477 (trim54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-B_box
RING_XB3-XBAT31
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-RING_6
zf-C3HC4_3
Sina_RING
EFR3_ARM
CYP38_PsbQ-like
SpoIISA_toxin
Motif
Other DBs
NCBI-GeneID:
127182477
NCBI-ProteinID:
XP_050993719
LinkDB
All DBs
Position
20:complement(24997336..25016290)
Genome browser
AA seq
358 aa
AA seq
DB search
MNFSLGFKPAMGDSSSVENLEKQLICPICLEIFTKPVVILPCQHNLCRKCANDVYQASNP
LWQNRGPVSTGGRFRCPSCRHEVILDRHGVYGLQRNLLVENIIDIYKSETTRPLLPKTEQ
QQLMCDQHEEEKINIYCLTCETPTCSMCKVFGAHKDCDVAPLPDIYKRQKTELSDAIAIL
VAGNDRTQALISQMEDICRTVKENSHRQMQYISDKFDELYAILEERKRDLIETVGREQDQ
KLGHVRSLIRQHGDHLEMSVKLVETAIQSMEEPQMAVFLQSAKEVFKKITDTAKASNIER
MEAGYESMAHFIINTEDVADMLRGIDFQTGEDGEDSGDEAPEDLTTSPGQTGDSERHL
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcagtttgggcttcaaaccagcgatgggagactcaagttcagtggagaactta
gagaagcagctcatttgtcccatctgtctggagatattcaccaagcctgtggtcatctta
ccctgccagcataatctctgcaggaagtgtgccaatgatgtttaccaggcctccaaccct
ctttggcaaaaccggggtcctgtttctacagggggacgtttccgctgcccatcttgtcgt
catgaggtgatattggaccggcacggtgtatatggacttcagaggaacctgctagtggaa
aacatcatcgatatctacaaatcagagactaccaggccactcctgcccaaaacagagcaa
cagcagctgatgtgtgaccagcacgaagaggagaagatcaacatctactgcctcacctgt
gagacaccaacatgctccatgtgcaaagtgttcggggctcacaaggactgtgatgtggcc
ccgctgccagacatctacaagagacagaagacagagctaagtgatgccatagccatcttg
gtggccggaaatgacaggacacaggccctgatatcacagatggaggatatttgtaggact
gtcaaggaaaatagtcaccgtcagatgcagtacatctctgataagtttgatgaactttac
gccatcctagaagagcgtaaaagggacctaatagagactgtcggccgtgagcaggaccaa
aaactgggccatgtacgctccctcatccgtcaacacggagaccacttagagatgtcagtc
aaacttgtggagacagccatacagtccatggaagaacctcagatggctgtattcctgcag
agcgcaaaggaagtgttcaagaagatcacagacactgccaaggcttccaacattgagcgg
atggaggcaggctacgagagcatggcccacttcatcatcaacacggaggatgtggccgac
atgctgagaggcatcgacttccaaacaggtgaagatggggaagacagcggtgatgaagcc
cctgaagacctgaccacctcacctggtcagactggtgattcagaaagacacttataa
DBGET
integrated database retrieval system
