Labeo rohita (rohu): 127182487
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Entry
127182487 CDS
T09007
Symbol
taf1a
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lroh03021
]
127182487 (taf1a)
Transcription machinery [BR:
lroh03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
127182487 (taf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1_subA
COG4_N
Motif
Other DBs
NCBI-GeneID:
127182487
NCBI-ProteinID:
XP_050993736
LinkDB
All DBs
Position
20:31667445..31678183
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AA seq
458 aa
AA seq
DB search
MDDIEAEFNITAACPDSPQDHDREESIKQAVLFHQSHPDARGVLTSIDFVKSNRKCLNLI
REAMLRHNWQEAVEYFRSYIQTLEAGTYQELKSTASEITWRLGAEILHHFPNSNPDDFNA
LYEQLKNFGVMNYSKICLEHCFHLLLNGQMDEAKRQLSIADSWRYGKVSAAQSVMKKLIR
AYCGYVDYLIWSKKKTSAPGSEEAGSNREMHSYFRQASVTLKEIISQPGVWDPFVLSYCH
MLEFYGDEDSALQVLENYAYNKEFPSNPNAHVYLYQFLKRHEAPQAKLIGSLKILHSLVP
SHELMLELIELLLQTKQKRDQEEALAISMDLLEFPTWKRDLKVWKCLLKIMKKLKEKKCL
DVVRKEWSVRKSLWLSLHYRNYIARKDAAENVPLLLVKRDVLKLTRENPREYFRIATKIE
RAGEPKIVRPGKKEGKKEEKKATRKRRVKEKKKKTLDD
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggatgatatagaggctgagttcaatattacagcagcgtgtccggattctcctcaggat
catgacagagaggaatcgattaaacaggctgttcttttccaccagtctcatccagacgcc
agaggtgtgctcacatcgattgacttcgtcaagtccaacagaaagtgtctgaatctgatc
agagaagcgatgctgcggcataactggcaggaggctgtggagtatttcagatcttacatt
cagacattggaagctggaacttatcaggaactgaaatcaacagcttctgagatcacgtgg
cgtctaggcgcagagattctgcatcattttcctaattccaaccctgacgatttcaacgct
ttatatgaacagttaaaaaacttcggcgtcatgaattactctaagatctgtttggagcat
tgctttcatctcctgctgaacggccagatggatgaagccaagcggcagctgtccatcgca
gacagctggagatacggcaaggtgtcggctgctcagtccgtcatgaaaaagctcatccgt
gcctactgcggttatgtagattacctgatctggagcaagaagaagacctctgcacctgga
agcgaggaggcgggcagtaaccgtgagatgcacagctacttcagacaagcttctgtgacc
ttgaaggagatcatcagtcagcctggagtctgggatcctttcgtcttgagttactgtcat
atgctggagttttacggtgatgaggattctgctctgcaggttctggagaattacgcttac
aacaaggagttcccatcgaaccctaacgctcacgtgtatctgtaccagttcctcaagaga
cacgaagccccacaagccaaactcatcggttcattaaagattctgcactctttagtcccg
agtcacgagctgatgctggagctgatcgagctcctgctgcaaaccaagcaaaagcgcgac
caagaagaagctctcgccatttccatggaccttctggagtttcccacctggaaacgtgac
ttaaaggtttggaagtgtcttctgaagattatgaagaaactcaaagagaaaaagtgcttg
gacgttgtgagaaaggagtggagcgtcaggaaatcgctctggctttccttacactacaga
aactacatcgccaggaaggacgcggccgagaacgtcccgcttctgttggtcaagagagac
gttttgaagttgacgcgtgaaaaccccagagaatacttcagaattgcaacgaaaattgag
agagcaggtgaaccgaagatagtaagaccggggaagaaggaggggaagaaggaagagaag
aaggcgactaggaagcgcagggtgaaggaaaagaaaaagaagactcttgatgattaa
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