Labeo rohita (rohu): 127182528
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Entry
127182528 CDS
T09007
Symbol
stx7l
Name
(RefSeq) syntaxin-7
KO
K08488
syntaxin 7
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04130
SNARE interactions in vesicular transport
lroh04140
Autophagy - animal
lroh04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
127182528 (stx7l)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127182528 (stx7l)
04140 Autophagy - animal
127182528 (stx7l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127182528 (stx7l)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127182528 (stx7l)
Membrane trafficking [BR:
lroh04131
]
SNARE
Syntaxin (Qa)
Stx-Endo
127182528 (stx7l)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127182528 (stx7l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin_2
SNARE
TPR_MLP1_2
FAM184
ANIS5_cation-bd
Prominin
PEP-utilisers_N
DUF3394
Ribosomal_S15
DUF3939
CcmD_alt
Enkurin
Cep57_CLD_2
TMF_TATA_bd
DUF2779
E1-E2_ATPase
DUF3452
Motif
Other DBs
NCBI-GeneID:
127182528
NCBI-ProteinID:
XP_050993796
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Position
20:29145181..29156492
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AA seq
258 aa
AA seq
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MSGSGGVDANMLAQTIGSNIQRITLLTNEIQQMMRHFGTAQDTTDLRQTLQEKQQQVNQL
AKVTDKYMKEFSALPVTTEQRQRKIQRERLINEFSNALAVFQKAQREVAKKEKEFVARVR
ASSRVSAGDTDDGFGGFSSPFRSDVHAQTQSYEDAITEEDLQLIQERESAIRQLESDITD
INEIFRDLGMMVHEQGDMIDSIEANVSNAEINVQTATQQLNRAASHQTSFRKKIFILIAV
LIVAAVIIGLIIYASVKK
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgtctggatcaggcggagttgatgccaatatgttggcgcaaactataggttcaaatatc
cagagaataacattgctaactaatgaaatccagcagatgatgagacattttggaacagca
caagacactactgatctgcgacagacattacaggagaaacagcagcaggtcaatcagctt
gctaaagtgacagacaagtacatgaaagaattcagtgctttacctgtgaccacagaacag
cgacaaagaaaaatccagcgagaacgtctcatcaatgagttctccaacgcgctggccgtt
ttccaaaaagctcagcgagaggtagcgaagaaagagaaggagtttgtggcacgtgtccga
gcgagctcgagggtttcagctggtgatacagatgatgggtttggagggttttcatcaccc
tttcgaagtgatgttcatgctcaaactcagagctatgaagatgccatcacagaggaagat
ctgcagctcattcaggagagagaatcagcaatcagacagcttgagtcggacattacagac
attaatgaaatcttcagagatctgggcatgatggtgcatgaacaaggagacatgattgac
agtatagaggccaacgtatcaaacgcagagatcaatgtgcagacagccacacaacagctg
aacagagcagcaagccaccagacatcattccgcaagaagattttcatcctgatcgctgtt
ctgattgtggcagctgtcattattggtttgattatctatgcttctgtcaaaaaatga
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