Labeo rohita (rohu): 127182547
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Entry
127182547 CDS
T09007
Symbol
taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lroh03021
]
127182547 (taf1b)
Transcription machinery [BR:
lroh03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
127182547 (taf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
DUF5816
Motif
Other DBs
NCBI-GeneID:
127182547
NCBI-ProteinID:
XP_050993825
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All DBs
Position
20:complement(19104536..19110791)
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AA seq
434 aa
AA seq
DB search
MDEQLTGGYSEPCGQCAAVDWGVSDEGQFFCRSCHNVIEKTREVEDVTTLHSINSRISQI
TKPKKKRDEGGREWIICEGFQFILNHQAKALVSLGVCMKFETEVLWNFWKIYLQNTQQAF
TKNPVYTPRFTVFMKSQSDEEVNSPSQQSNHTEVASDMSEEMSVSGYSSEVQSSVLSKGS
SDVGAYPKTKGGKERNKFMSMPRTLALCYLALLWIREAITLADLLRLVSEGRIPYVNIHE
AFPEEMRLFGKDVRFFNVRYIPSYSLVHKEAVALAQIMKLPSFPTISQDCLLHPLPLTVR
YLLEANLPDDLHIWVHKVIRQASMGDSSFLTFDPSKEKPHLVCYDIQAVAVIIVALKLLF
KLDDHEEWKLSEEAGKKKKRVFKLKKWFDVVQPVLEKARKREEQEEARRKWGTTKPFITT
LKRKCLTLKKKARC
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggacgaacaacttactggtggatacagtgagccatgcggccagtgcgctgctgtggac
tggggagtgtcagatgagggtcagttcttctgcaggagctgtcacaatgtgatcgagaaa
acgagggaggtggaagatgtgaccacccttcatagtataaacagcaggatttcacaaata
acaaaacccaaaaagaaaagagatgagggtgggcgagagtggataatatgtgagggattc
cagttcatcttgaaccaccaggccaaggctttggtcagtcttggtgtttgcatgaagttt
gagacagaagttttgtggaatttctggaagatatacctgcagaacacacagcaagctttc
accaaaaatccagtgtacactccaaggtttacggtgttcatgaagtcacaaagtgatgag
gaggttaactctccaagtcagcagtctaatcacacagaggttgcttcggatatgtcagaa
gagatgtcagtctcaggttactccagtgaggtacagtcatcagtactttccaaagggtct
tcggatgttggtgcataccccaagacgaagggagggaaagaaaggaacaaatttatgtcc
atgccacggacactggccctgtgctatctggctctgttgtggatccgagaggccatcact
ctggctgacttactcaggctggtctcagaggggcgaataccttacgtgaacattcacgag
gcgtttccagaggagatgcgactgtttggaaaagacgtccgtttctttaatgttcggtac
attccgtcctactcgctggttcataaagaagctgtggctctggctcagatcatgaaatta
ccctccttcccaacaatttctcaggattgccttctccacccgcttccactcactgtccgc
tacctgctggaggcaaacctcccagatgaccttcatatctgggtccacaaggttataaga
caggcttctatgggggacagctcttttctgacctttgaccccagtaaggagaagcctcat
cttgtgtgctatgacattcaggcggtagctgtcatcatagtcgccttgaagctccttttc
aagttggatgatcatgaggagtggaagttatctgaggaagcaggcaaaaagaaaaagagg
gttttcaagttgaaaaagtggtttgatgttgtacagcctgtcctggagaaagccagaaaa
agggaagagcaagaagaagcccgacggaaatggggaaccactaagcctttcattacaact
ttgaaacgcaagtgcttgaccctcaaaaaaaaggcgcgttgctga
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