Labeo rohita (rohu): 127182567
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Entry
127182567 CDS
T09007
Symbol
dtl
Name
(RefSeq) denticleless protein homolog
KO
K11790
denticleless
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127182567 (dtl)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
127182567 (dtl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
ANAPC4_WD40
WD40_RFWD3
Beta-prop_HPS5
NBCH_WD40
Beta-prop_SPT8
WDR90_beta-prop_4th
MIOS_WD40
TAF1C_beta-prop
VPS11_N
DUF2844
Motif
Other DBs
NCBI-GeneID:
127182567
NCBI-ProteinID:
XP_050993844
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All DBs
Position
20:4878722..4886183
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AA seq
654 aa
AA seq
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MTLFHHVVDRGVIKRRCNGQRRDYPLSSLLDGYQCSRQDEHISYGASAAAVPPFGCTFSS
APGQQNSLAVANEEGFVTIFNTGEKQSSVLKEWQAHDNAVFDIAWVPGANSLVTASGDQT
ARFWDVITGDLLGTFKGHQCSLKSVAFSKQEKAVFSTGGRDGNIMIWDTRCSKKDGFYRQ
VKQISGAHMKPERHTPQTKKRRGMAPPVDSQQGVTVVLFCDDNKLISSGAVDGIIKMWDL
RKNYTAYYHNPLPLQAYPYPGSCTRKLGYSGLSLDSTGARLFSNCTDDNIYMFNISGLKT
TPVAVFSGHSNSSFYVKSSVSPDDQFLASGSSDHHAYIWKISDPKQAPMMLQGHSQEVTS
VAWCPTDFTKIASCSDDNTVRIWRLNRRPDEESSSIRDPNVVGWTLRKIQSPPRAPGPYS
PVEVTPAKSPGLERAISLASPQPAACAPMGGDLPLPSNTSAPLAKISSPKMPSSIQQWIS
RGNSPGHRGTSPLRKALTPVLQGPSSERRAKRRLETGDRSGLGEESDGVSELYPDVKRSR
SSVSSHNCSEEKGDLLSLQTQERLSSASQADTGKENSSPRRTDWLSVISQRFKGSAQPKS
PNNSSKRQDARTHSSPAASSPCPMRVLSPPPNKKASPSKPMKKISSYFMKRTQD
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgactctttttcaccatgttgttgatcggggtgttataaaaagaagatgcaatggtcag
cggcgggactatccgctgtcctctctgctggatggataccagtgcagtcgacaagatgaa
cacatttcatacggagcctcagctgctgctgtgccgccgtttggatgcacattttcctcc
gcccctggccaacaaaacagcctcgctgtagcaaatgaggaagggtttgtgaccatcttc
aatactggagaaaaacagagctctgtcctgaaagagtggcaggcacacgataatgcagtt
tttgatattgcatgggttcctggtgcaaacagcttggtaacagcatctggagaccaaacg
gcccgtttttgggatgttattactggtgacctgctgggaacatttaaaggacatcagtgc
agtcttaaatctgtggctttttccaagcaagagaaagctgtgtttagcactggaggcaga
gatgggaacataatgatttgggatacaagatgcagtaaaaaagatggtttctacaggcag
gtaaaacagatcagtggtgcccatatgaaacctgaaagacacacacctcaaacaaagaag
agacgtgggatggcgccccctgtggactcccagcagggtgtgaccgtggttttgttctgc
gacgacaacaaactcatctcttcaggagcagtagatgggatcattaaaatgtgggatttg
cggaagaactacactgcatactaccacaaccctcttcctctacaagcctatccttaccca
ggctcctgtacacgcaaactaggttattctggtctgtcactggattccactggcgcccgt
ctgttttccaactgcacagatgacaatatctacatgttcaatattagtggtttgaaaacg
actccagttgctgtattcagcggtcacagtaactcctcattttatgtgaagtccagtgtc
agcccagacgaccagttcctggccagtggttcgagtgaccatcatgcttacatatggaag
atttcagacccaaaacaagctcccatgatgcttcaaggccatagccaggaagtcacatca
gtggcctggtgccccactgatttcaccaagatcgcttcctgctctgatgacaacactgta
aggatctggcgcttgaaccgcagaccagacgaagaaagttcatcaatccgagatccaaac
gtcgtaggctggacacttcgtaaaatccaatcaccaccaagagcacctggcccttacagc
cctgttgaagtcactccagctaaaagtcctggtttagaaagggccatctctctggcttca
ccccaacccgctgcgtgtgcccctatgggtggtgatttacccctcccgtcaaacacatct
gcacctttggccaagatcagcagccccaaaatgccctcctccatccagcagtggatcagc
cgtggtaattcccccggtcaccgcggtacatctcccctccgcaaggcgctcacacctgtc
ctccaaggcccatcgtctgaacgcagagcaaagcgacgactagaaacgggtgatagatct
ggtttgggagaggagagtgatggagtgtctgaactgtatcccgatgtaaagaggagcagg
agttcagtaagctcgcacaactgttcagaggagaaaggtgacctactcagtttgcaaaca
caggagaggctcagctcggctagtcaagctgacactggcaaagagaacagctctccgagg
aggactgattggctttctgtgatcagccagagatttaaaggatcagctcaacctaaaagc
cccaacaacagcagcaaacggcaggatgcaagaacacacagctctccggcagcaagctca
ccatgtccaatgagagttttgtctccaccgccaaacaagaaagcatcgccctccaaaccc
atgaaaaaaatctctagctactttatgaaaagaacccaagactga
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