Labeo rohita (rohu): 127182632
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Entry
127182632 CDS
T09007
Symbol
taf4b
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127182632 (taf4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lroh03021
]
127182632 (taf4b)
03036 Chromosome and associated proteins [BR:
lroh03036
]
127182632 (taf4b)
Transcription machinery [BR:
lroh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127182632 (taf4b)
Coactivators
SAGA/TFTC/STAGA complex
127182632 (taf4b)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
127182632 (taf4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
127182632
NCBI-ProteinID:
XP_050993975
LinkDB
All DBs
Position
20:11642347..11665529
Genome browser
AA seq
844 aa
AA seq
DB search
MSETSGSDKSDINGSRAAIENEENNNDAQPSNAEVTSQTALDKKRETLDSNANVNTSEDS
KTDLAATYGEVEQPKPKPETDSSNSASQRPVTVAVSSSSASSEPAPKIIAGPAQIRSTTP
VVVGARVVTSNVQGPGATSLALVPQPGRVSVAVSQPRVTTLTAAKGTVVTLPRISTTSQS
APMTRAPQTVPLQLPANFQVPQGMVLIRSDSGQLMLVSQQALAQAQAQGMLPKPASANAT
AIVRPSSSQATVTTTPIIRVSLPPSSASATTNIKLNPTTGTAVQKSSTATGTAIFTPSCT
TGATIIKPAGVIGTAIRKPSSTMGPVIKASQMTPNSSTPGTFNQRTNSVTATTIINTTAV
KSVGKGALSTQGNAPRMVSPNVPTRANTNTSSTPVTVTAETLENVKKCKNFLVTLMKLAS
SGTRSANMAQNVKALVKGLLDGKLEAEEFTEKLYMELKSSPQPYLVPFLKRSLPAVRQLT
PNSQLFIQQCDQLKPSDSASTKAANQKSAVSVSSALKPNQPTRTAQLVIQQPKGVIVKQS
QVGLPAQNQTQPKQIFIQTNTQPAGAVVRQSILQASKTHFSQPPLPAQAHGFKDSTSGSF
RDDDDINDVASMAGVNLSEENARILASGSELVGSVIRSCQEEPFLFPSALQSRVQQIGGT
LSITEVCPDVLELLSLVTQERLRDLLEKITVVAQHRQISYKDDWRYSQTSDTRSQLKFLE
QLERLEKQRREEEEREALLRIARSRTNTEDPEQQRLKQRAKEMQQLELAQMEHRDANLAA
LAALGPRKRKPLEAPGSGANQLLGSCGQFATRAPIRVTLRDLTFCMEQDPTFRHTLMLYR
AFLG
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaacatcgggttcagataaatcagacattaatgggtctcgggcggcaatagag
aatgaagaaaacaacaacgacgcccaaccaagcaacgctgaggtaacttcacaaaccgct
ttagacaagaaaagagagacattagactcaaacgcaaatgttaacacctctgaagacagc
aaaacagatttagctgccacttatggggaagtagagcagccaaaaccaaagccagagact
gattcatcaaactctgcaagtcagcgtcctgtaacagttgctgtgagctccagttcagct
tcatctgaacctgctccaaagatcatagcaggccctgcacagatcagatccaccacacca
gtggtcgtaggagccagggtggtcacgtctaatgttcagggaccaggggccaccagcttg
gcactggttcctcagcctggaagggtctcggtggccgtaagccagcccagggtcaccaca
ctgaccgctgccaaagggacggtcgtgacattgccaaggatttccaccacatcacaaagt
gcaccaatgacacgcgcacctcagactgtgccactgcagctgcctgccaacttccaggtc
ccacaaggaatggtgttaatccgcagtgacagcgggcagttgatgttggtatctcagcag
gctctggcccaggcacaggctcagggaatgctgccaaaaccagccagtgccaatgccact
gctatagttagaccctcatcttcacaggcaactgtaaccaccacaccaatcatcagagtt
tctctcccaccttccagtgcatcagctaccaccaatattaaacttaaccccactacaggg
actgctgttcagaaatcatccactgctacagggactgctattttcacgccatcatgtaca
acaggagctaccattattaaaccagccggggttatagggacagccatcagaaagcccagc
tctaccatggggcctgttatcaaagccagtcaaatgactccaaacagcagcacaccgggg
acctttaaccagaggactaattctgtcactgcaactaccataattaataccactgctgta
aagtctgtgggcaaaggtgctctctccacccagggtaatgcaccacgtatggtgtctcct
aatgtaccaaccagagccaacacaaacacatcatcaactccagtcactgttacagctgag
accttggagaatgtgaagaagtgtaaaaacttcctggtcacccttatgaagcttgcatcg
agcggcacccgctcggccaacatggctcagaacgtcaaagctcttgttaaaggcctgctg
gatgggaaactagaggcagaagagtttactgaaaaactctacatggagctcaaatcatcc
cctcagccatatctagtgcctttcctgaagaggagcctgccagctgtccgtcaactcacc
ccaaactcacagctcttcattcagcaatgcgaccaactcaagccctcagattctgcatca
accaaggccgcaaaccagaagtccgctgtgtccgtcagctccgccctcaagcccaaccag
ccaaccagaacggctcagctggtgatccagcaacctaaaggagtaattgtcaaacagtct
caggtgggcttacctgcacagaaccaaactcaacccaaacagatcttcattcaaaccaac
actcagccagcaggtgctgttgtgcggcagtccatccttcaggcgtctaaaacacacttt
tcccagccgccccttccagcacaggcacacggcttcaaggacagcacctcgggctctttc
cgagatgacgatgacattaatgatgtggcctccatggccggtgtgaacctgagtgaggag
aacgctcgtattttggcctctggctccgagcttgtgggatcagtgatccgctcctgtcaa
gaagagccctttttattcccatcagcccttcagtcacgagtgcagcagatcggtggaact
ttgagtatcacggaggtctgtcctgatgttcttgaattgttgtctctggtgacacaagag
aggctccgagacctgctagagaagataaccgttgtggcacaacatcgacagatctcttat
aaggatgattggcgctacagtcagaccagtgacacgcgctctcagctgaagttcctggag
caactggaaagactggagaaacagaggagggaggaagaggagcgagaagcactgctccgc
attgcacggagtcgcacaaacaccgaagacccagagcaacagcgtctgaaacagcgagcc
aaagagatgcagcagttggagttggcacagatggagcacagagatgcaaatttggcagcg
ctggcagccctggggcctcgtaaaaggaaacctctggaggctcccggctcaggggccaac
cagttgttaggttcatgtgggcagtttgctactcgagcaccgattcgggtcactttgaga
gatctgaccttctgcatggagcaagaccccacattcagacacactctcatgctgtacaga
gcatttctaggctag
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