Labeo rohita (rohu): 127182649
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Entry
127182649 CDS
T09007
Symbol
esr2a
Name
(RefSeq) estrogen receptor 2a isoform X1
KO
K08551
estrogen receptor beta
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
127182649 (esr2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127182649 (esr2a)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lroh03310
]
127182649 (esr2a)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
127182649 (esr2a)
Nuclear receptors [BR:
lroh03310
]
3. Estrogen like
3A. Estrogen receptor
127182649 (esr2a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ERbeta_N
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
127182649
NCBI-ProteinID:
XP_050994007
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Position
20:13579963..13604614
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AA seq
557 aa
AA seq
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MSEYPEGDSPLLQLQEVDSSRVGGHVLSPIFNSSPSLPVESHPICIPSPYTDLGHDFTTL
PFYSPALLGYGTSSLSDCSSVRQSLSPTLFWPPHSHVSSLALHQQQTRLQQSHPNGGTWA
ELTPHDHGEEENSKPLVKRVADAEETSASMRGKADMHYCAVCSDYASGYHYGVWSCEGCK
AFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMMKCGLRRDRGSYQQRG
AQQKRLARFSGRMRTSGPRSQEIKTVPCPLSENRVVTMALSPEELIARIMDAEPPEIYLM
KDVKKPFTEASVMMSLTNLADKELVHMISWAKKVPGFVELSLFDQVHLLECCWLEVLMLG
LMWRSVNHPGKLIFSPDLSLSRDESSCVQGFLEIFDMLLAATSRFRELKLQREEYVCLKA
MILLNSNMCLSSSEGAEELQSRSKLLCLLDSVTDALVWAISKTGLSFQQRSTRLAHLLML
LSHIRHVSNKGMDHLHCMKMKKMVPLYDLLLEMLDAHIMHSSRLSHSSPRAATSPKESKG
IQEAFACSSQHGETLGP
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagtatcccgagggagacagccctctgcttcaactgcaggaagtggactccagc
agggtgggaggtcacgttctctctcctatctttaactcctctccatccctgcccgtggag
agccatcccatctgcattccttcaccctacacagatctcggccatgacttcaccactctg
cccttctacagtcccgctctgctgggttacggcacgtcgtctctatccgactgctcgtcg
gtacggcagtcgctaagccccaccctcttttggccacctcatagccacgtttcctcactt
gcattgcatcagcaacagactcgattacaacaaagccatccaaatggtgggacgtgggct
gagcttacaccacatgatcacggtgaagaggaaaacagcaaaccgttggtgaagagggta
gcagatgcagaggagacttctgcctctatgagaggcaaagctgacatgcactactgtgct
gtctgtagcgattacgcttctgggtatcattatggcgtgtggtcgtgtgaaggatgtaaa
gccttcttcaagagaagtatacaaggacacaatgactacatctgccccgccaccaaccag
tgcaccatcgacaagaaccgccgcaaaagctgccaggcctgccgcctccgaaaatgttat
gaagttggaatgatgaaatgtgggttacggcgagatcgtggaagctaccaacaaagagga
gcacagcagaaacgactggcgcgattctctggcagaatgagaacaagtggcccgagatct
caagaaatcaaaactgtcccatgtcctctcagtgaaaatagggtggttaccatggcattg
agccctgaggaactaattgctcgaatcatggatgcagagccacctgagatctatctcatg
aaggacgtgaagaagccgttcactgaggccagcgtcatgatgtcactgaccaacctggct
gacaaagagcttgttcacatgatcagctgggccaagaaggttccaggttttgtggagctc
agtctgtttgaccaggtccatttgttggagtgctgctggttagaggtgctaatgctggga
ctgatgtggcggtctgttaatcaccctggaaagctcattttctctccagacctcagtctc
agcagggatgaaagcagctgtgtgcaggggtttctggagatttttgatatgctgctggca
gccacgtccaggttcagagaactcaagttgcagagagaggagtatgtgtgtctcaaagcc
atgatcctgctcaactccaacatgtgcctgagttcgtcggagggagcagaggagctgcag
agccgctcgaagctgctgtgtctgctggactcggtgacggatgccctggtttgggccatc
tcgaagacgggtctgagcttccagcagcgctccaccagattagcccatctgctcatgctg
ctctcccacataaggcacgtcagtaacaaaggcatggaccacctccactgcatgaagatg
aagaagatggttcctctgtacgacctgcttctggagatgctggacgctcatatcatgcac
agctcacgtctgtctcactccagccctcgagcggctacttctcccaaagaaagcaaaggc
atccaggaggccttcgcctgctcttctcagcacggagagaccttaggaccctaa
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