Labeo rohita (rohu): 127182684
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Entry
127182684 CDS
T09007
Symbol
tprb
Name
(RefSeq) translocated promoter region b, nuclear basket protein isoform X1
KO
K09291
nucleoprotein TPR
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127182684 (tprb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127182684 (tprb)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127182684 (tprb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
127182684
NCBI-ProteinID:
XP_050994091
LinkDB
All DBs
Position
20:complement(22017494..22038213)
Genome browser
AA seq
2374 aa
AA seq
DB search
MAAVLQQILERSEISKLPKTVLTKLEKYISEQQCEVDCLKAQQEQYRVDNEQQYFDIEKK
FAESQAQFVSQTQEHQILKEDYCKLENELKCLREKNKEQTSSYTKLESEQNEVSKAKDEL
EAEKRELVRTLERRSQEMEQQSEDLKRLNDRLVEVNAEKMQLQLKLDESESTEVSIKYKE
KRMEQEKDLLQGQVTWLNTELKTKSEELLSLSRQKGNEILELQCNLNNKEDEIARLQDQV
TSLKASNENLQRQAEEMITKMREAKEQQASLEEKFGNELNANIKLSNLYKGAAADAEAKS
EELSRAVDELHRLLKEAGEAHKALEVRMAELESCKDKEIAELKEKISSQEKELDNANELL
SDKHRGTTSILTEEQVTTMSPTAAAVAKIIKPGMKLTEIYTAYVETQEQLQREKLENKRL
HKYLDDIVQEMEAKAPILKRQREEFERMQKSVSSLSAKLEQAVTEVHRLQKEADDSNKCA
SVLERDNQRFEVQLADMSQQVRVLLIELEEARGNHVMREEDEVCSADVSSTSEVISQHLV
TFRSVEELQQQNQRLLVALRDLSEEKEKDELEGDTMKRSEVEKYLEELQRELEQLKEKRA
QDLQKVDAVARQRDMFRMLLTQATGVTFPQGAGNEDLMLTSTPRRSPAVTPTTGTPTGLV
ATAIESTESVEAKAALKQLQEVFVAYKKEKTESEKAQTEQSEKLQDQVTELRSENTKIST
QLEFTSKRYEMLQDNVEGYRKEIASLNEKTQKQAAAIQQSEQTIHTLTQDLRAAAEKLSS
AESEAENLRKERDMLKMVEIRLTQEKESFQAQQLGQNMLLTNLKSIQATLERSETETRQR
LTAQIEKQEREITQLQKRLENEVEQKHLLARNQDMQLMDVKKQLETQTTQYHRTREQLTA
AQLELNNLKLQMSSRESRLVSPTALTGLQGSEGDTEALRAQLKQAESKVEDLAERLKNTI
ASMEQYKAMSLSLEESLDKEKQVTEQVRSSVQNQVEVAQEQYKQLEQKLLEADKEKQSLL
EEKSKAIAAVEQELNELRKSLSSLQAEHQSALDKAAVAAAQEQQAIQDSQEQAKMAAEAQ
DKYEREMLLHAADVEALQAAKAQALQAAHLRQQLEDKVQSTSAQLLEARVSWEEQEKILK
EEQSKLESRSEELQRQNTLLHEQIQTLSGQMASQLQRATTESQLNVSLTEEGKSQEQLLE
ILRFVRREKEIAESRFEVVQGESLRHRLRVEHLERELKDVQESLNAERERMQVTAKTLTQ
HDELMKKTETMSVLMETNKMLREEKEKLEQELKDTQAKVRKLESDILPMQESNAELSEKS
GMLQAEKKLLEEDIKRWKARTQHLVSQQKDTDPEEYKRLHSEREAHLKRIQQLIEETSRL
KADASRSSGSLTMMQSQVQNLRENLGKVMVERDNLKKDQEAKNLDIQEKLKTITQVKKIG
RRYKTQYEELKVEYDKLVAAAASAPAQDQEAQQASAQELQALKESLNQSGNRTRELEGHL
ENLNRTVGEREAEARSAQEQAARLQAELSRLRQELQEKSSQEERLKQQLTEKEERTKKAI
LMAKQKISQLTGVKGQLQKENEELKQQKEELEVRVSALKSQYEGRLSRQERELRDLREQQ
ERHGEQRDEPPEQGSSKTQEPQRTTEQRQISLKSTPVAERGSASTSEPPTANIKPTPLAA
TPSKPPAIPGNKSTPRASIKPMITPAPVPTPTPTATVMPTTQVETQEPMQSSEAPLEHVT
VYGSASGSVRSTSPNVQTTLAQPLLNVQQQNQATAFIQPTQQQTQPPAEPSNQEPPAAVM
LPNSQLDRPLSTSTGIWSATASTSSASAVSASPSSALSKRPREEEQESMSADTQSQDEPN
DTPICKRVRIHRVGLEEEMLAEDSTEAESVVPGDSQEAPDAGQIMELERWTTFESCATLE
MMDEEPGPSQSVPGDRPLTHPSETHRSPEEPDHHVIVILSDTDSEGDHEEESEEEEEEEQ
DYEEEDEEEEEEDDDDEEDGGIGEEGEDSNEGSGSRDGNEAYEADDTEGPDPTDPGTETE
ESLGATDSTQRMADSQSSPSLFLSSVCGVSVETSTLDVFEAPVTSSASRPHPQSPRRPQH
PLPPRLNILAPPAQDLGPPAQAQRLPVRRPSVGRGLQLTSGMASSAQHFYEDDDRMVPST
PTLPPPRSDGFAEAIHSPQVAGVSRFRFGPSDDLPQTSSSHSDLGQLPSQGLGMYESSVY
LGAHEEESGGRSVPTTPLQIAAPVTILSESVASEAIEHASQSVPMVSTSTPGLSAPAGPS
GVEERDDMFMDAGDSAEASLEAVSQNEAEEAAQPSDEASLPSTSQEPSSSSADTSSSQPP
KVRTGSGRQWTGGRGSRSFVKRDGVTGVRGRFAR
NT seq
7125 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtgttgcagcagatattggagcggtcggagatatcaaaacttcccaaaact
gtcttgactaaattagagaagtacatttctgaacagcagtgtgaagttgattgtctgaag
gcacaacaggagcaatatcgtgtggataatgaacaacagtattttgacatcgagaagaag
tttgcagagagtcaggctcagtttgtctcacagacacaagagcatcagatactgaaagaa
gactactgcaaattggagaatgagctgaaatgcttacgagagaaaaataaggagcaaacg
tcttcatacaccaaactagaatcagagcagaatgaagtttccaaagccaaagatgagctt
gaggcggaaaaacgagagcttgtgcggacactggaaaggagatcccaggagatggaacaa
caaagcgaggatctgaagcgtcttaatgatagattggtggaagtcaatgcagaaaaaatg
cagcttcagctcaagctggatgagtcagaatccacagaggtctcaatcaagtataaagag
aaacgaatggagcaggagaaagatctactccagggtcaggtgacctggctgaatactgag
cttaagaccaagagtgaagagctgctgtctctttccagacagaaaggcaatgagatcctg
gagctccagtgcaaccttaataacaaggaggatgaaatcgcccgtcttcaagatcaggtg
accagtctgaaggcgtccaatgagaaccttcagaggcaagcggaggagatgatcaccaag
atgagagaggcaaaggaacagcaagccagtttggaagagaagtttggtaatgagctcaat
gccaacatcaaactttcaaacttgtataagggagctgcagctgatgcagaggccaagagt
gaggagctcagcagagctgttgatgaacttcacagactgcttaaagaggctggagaggca
cataaagctctggaagtgaggatggcagagctggagagttgtaaggacaaagaaattgct
gaactgaaagagaaaataagcagccaggagaaagagctggacaatgcaaatgagctgctg
tctgacaaacacagaggaactacttcaattcttacagaggagcaggtgaccacaatgtct
cccacagcagctgctgttgccaaaatcatcaaaccaggcatgaaacttacagagatatat
acagcatatgttgagactcaagaacagctacaacgggagaaactagagaacaaacgactg
cacaagtacctggatgacattgtgcaggagatggaagcaaaggcgcccatcctgaagaga
cagagagaggagtttgagcgcatgcaaaagtctgtttccagtctctctgctaaacttgag
caagctgtcacggaggtccaccgcttgcagaaggaagcagatgacagcaacaaatgcgca
tctgtgttggagagagacaaccagaggtttgaggtccagctggctgacatgtctcaacag
gtgcgggtcctcctcattgagctggaggaagcacgaggtaaccatgtgatgcgtgaggag
gatgaagtgtgttcggcggatgtgagcagtacttcagaggtgatttctcaacacctggtc
accttccgcagcgttgaagagctgcagcagcagaaccagcgactcctagtggcactcaga
gacctcagtgaggaaaaggagaaagatgagttggagggagacaccatgaaacgcagtgaa
gtggagaaatatcttgaggagcttcagcgtgagttggagcagctcaaagaaaagagagct
caggatctgcagaaggttgacgctgtggcacgacaaagggatatgttccgcatgcttctg
acccaggccactggagtcaccttcccacagggtgctggtaatgaggaccttatgctgacc
tccacccctcgccgttctccagctgtcacacccacgacaggcacccctacaggactggtt
gcaacagcgatagaatccactgagtcagtagaggccaaggctgcactgaagcagcttcag
gaagtctttgtggcctataaaaaggaaaaaactgagtctgaaaaagcccagacagagcaa
agtgagaaattacaggaccaagtgactgaactccgctctgaaaacaccaagatctccaca
cagctggagttcacctccaaacggtatgagatgctgcaggataacgtggagggctaccgt
aaggagattgcctctttgaatgagaagactcaaaaacaggctgcagcaattcagcagagt
gaacagaccatacacaccctcacccaggatctgcgagcagcagctgagaaactctccagt
gctgagtcagaagcagagaatctgcgtaaagagagagacatgttgaagatggtggagatc
agactgacccaggagaaggagtccttccaggcccaacagcttggccagaatatgctgctt
accaacctcaaatcaatacaggcaactctagagcgctctgagacagagaccagacaaagg
ctgactgctcagattgagaagcaggagcgagagatcactcagctccagaagagacttgaa
aatgaggtggaacagaagcacctgctggcacgcaatcaagatatgcagctgatggatgtt
aagaagcagctggaaacacagaccacccagtaccacaggacaagagaacagcttactgct
gcccaactcgagcttaacaacctaaagctgcagatgagtagcagggagagccggctggtg
tctcctacagcacttacaggcctgcagggcagtgaaggtgatacggaggctctgcgtgcc
cagctgaagcaggctgagagcaaggtagaagatctggccgaacgactgaagaacactatt
gccagcatggagcagtataaggccatgagtcttagcttagaggagtccctggataaagag
aaacaggtaacagaacaggtgcgatcatctgtgcaaaaccaggtggaagtggctcaggaa
cagtataaacagctggagcaaaaacttctggaagcagacaaggagaaacagagcttgctg
gaagagaaaagcaaagctattgctgctgtggagcaagagttgaacgagctgaggaaatct
ctaagcagcctgcaggcggagcaccagagtgccctggataaagctgctgttgctgctgca
caggagcagcaggccatccaggacagtcaggagcaggctaagatggcagctgaggcgcag
gataagtatgagagggagatgttgctgcatgcggccgacgtggaagcactgcaggctgcc
aaagcacaggctctgcaggcagctcatctcagacagcagctggaggacaaagttcagagc
accagcgcacagctgctagaggctcgtgtttcttgggaggagcaagagaagattcttaag
gaggagcagtctaagctagagtctcgcagtgaggagctgcagaggcagaacacactcctt
cacgagcagatacagactctgagtggacaaatggccagtcagctgcagcgagccaccact
gagagtcaactcaacgtctctctgacagaggaggggaagtctcaggagcagctcctggag
atcctaaggtttgtacgacgggagaaggagattgcagaatctcgatttgaggtggtccag
ggtgagagtctgaggcacaggctgagagtggaacatctggagagagagctgaaggacgtg
caggagagtctgaatgcggagagagagaggatgcaggtgactgcaaagactctgacccag
catgatgagctgatgaagaagacagagacaatgagtgtgctaatggagaccaataagatg
ctgagggaggagaaagagaaactggaacaagagctgaaggatactcaagccaaggtgcgt
aaactggagtcagacatcttgccaatgcaagagtccaatgcagagctgagtgaaaagagt
ggtatgctacaggcagagaagaagcttcttgaggaagatatcaaacgctggaaagctcgc
actcagcacctggtgagccagcagaaagacactgacccagaagagtacaagcgactgcac
tctgagagggaagcacatctcaaacgcatccagcagcttattgaggagactagtcgactc
aaagctgatgcttccaggagcagtggctctttgactatgatgcaatcccaggtgcagaac
ctaagggagaacttagggaaggtgatggtggagagggacaacctgaagaaagaccaggag
gctaaaaatctggacatccaggagaaactaaaaaccatcacacaagttaaaaagattggt
cgacgttacaaaacccagtacgaagagctcaaggttgaatatgacaagttggtagctgca
gcagcatctgcaccggcccaggatcaagaggcacagcaagcatcagctcaagaacttcaa
gctctcaaagagtccctcaaccaatcagggaacaggacaagggaactggaaggccatctg
gagaatctcaatagaactgtaggtgagcgggaagcagaggcacgcagtgcacaggaacag
gccgctcgtctacaggcggagctatcgcgtctcaggcaggagcttcaggagaaatcatct
caggaggagcgactcaaacagcagttgactgaaaaggaggagaggactaagaaggccata
ctaatggctaagcagaagatcagccagcttactggtgtaaaaggtcagctccagaaagaa
aatgaggagctgaagcaacaaaaagaagaattggaagtgcgagtgagcgcactaaagtct
cagtacgaggggcgtctgagcagacaggaaagggagctacgagacctccgcgagcagcag
gagagacatggagaacagagagatgagcctccggagcagggctccagcaagacccaggaa
ccacaaaggacaacagaacagcgacaaatctctctgaagtccacaccagtggcagaaaga
ggaagtgcaagcacttcagagcctccaactgctaatataaagcccacgccactggcagca
acccctagcaagcctccagcgattccaggaaacaaatccactccaagggccagcatcaaa
ccaatgatcactcctgctccagtgcccacacctactcccactgccacagtcatgcccacc
acgcaggtggagacccaagaacccatgcagtcatccgaggccccgcttgagcatgtgact
gtgtacggcagtgccagcggatcagtgcggtccaccagccctaatgttcagaccaccctg
gctcaacctctgctgaatgttcaacagcaaaaccaggccactgcgttcatccagcccaca
cagcagcaaacccagccccctgctgaaccatccaatcaggaacctccagctgctgtaatg
ctgccaaactcccagttagacaggcctctttctacatccacaggtatatggagtgccacc
gctagcacaagcagtgccagtgcagtgtccgcatcccctagtagtgccttgagcaaacgc
ccccgtgaagaggaacaggagagcatgtctgctgacacacagtcccaggatgagcccaat
gacactcccatttgcaagagggttcgcattcatagagtaggtctggaggaagagatgctg
gctgaagacagcactgaggctgagagtgttgtaccgggtgacagccaggaggctcctgac
gctgggcagataatggagttggagagatggactacttttgagagctgtgctactttggag
atgatggatgaggaaccaggaccatctcagtctgtccctggagaccgacctctgacccat
ccatctgagacgcatcgaagcccagaggagcctgatcatcatgtcatagtcattcttagt
gacacagatagtgagggagaccatgaagaggaatccgaggaggaggaggaagaagagcag
gattatgaggaggaggatgaggaagaggaggaggaagatgatgacgatgaggaggatggc
ggtattggggaagagggagaagacagcaatgaaggcagcggcagcagagacggcaatgag
gcctatgaggcagacgatacagagggcccagatcccacagatccaggcactgagacagag
gaaagtcttggagcgacagactccacccaacgcatggcagattctcagagctcaccttct
cttttcctttcatctgtatgtggcgtctcagttgaaactagcacactggatgtttttgaa
gcacccgtcaccagctctgcctctcgacctcacccacaatcacccaggagacctcagcat
cctctcccacctcgtctaaacatcttagccccacctgctcaagatttgggaccccctgct
caagctcagcggctcccagttcgacggccgtcagtgggacgaggcctccagcttacttct
ggaatggccagtagtgcacagcatttctatgaagatgatgacagaatggttcctagtacc
cctacacttcctcctcctcgctcagatggatttgctgaagcaatccattctccacaggtt
gcaggcgtatcccgatttagattcggtccttcggatgacctcccgcagactagttcctct
cactctgaccttggccagctgccatcacaaggtttaggcatgtatgagagttctgtttac
cttggagctcatgaggaggagtcaggaggccgcagtgtgcccacaacaccactgcagatt
gccgctcctgtgacaattttatcagagtctgtggcatctgaagcgatagagcatgcttct
cagtctgtgcccatggtgagcacctccacacccggccttagtgctcccgcaggccctagt
ggagtcgaggagagagatgacatgttcatggacgcaggagacagtgctgaagcttcactt
gaggctgtgtcacagaatgaggccgaggaagcagcccagccatcagatgaggccagtctg
ccttccacaagccaggaaccttcatctagttctgcagacactagcagctctcagcctcct
aaagtcagaacgggatctgggagacagtggacaggtggtcgtggctctaggagctttgta
aagagagatggcgtcacgggtgtgaggggacgttttgccaggtga
DBGET
integrated database retrieval system
