Labeo rohita (rohu): 127182717
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Entry
127182717 CDS
T09007
Symbol
ino80
Name
(RefSeq) chromatin-remodeling ATPase INO80 isoform X1
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127182717 (ino80)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127182717 (ino80)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
127182717 (ino80)
INO80 complex (yeast)
127182717 (ino80)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
HDA2-3
ResIII
PutA_N
Motif
Other DBs
NCBI-GeneID:
127182717
NCBI-ProteinID:
XP_050994185
LinkDB
All DBs
Position
20:complement(18219758..18272949)
Genome browser
AA seq
1554 aa
AA seq
DB search
MASEQDGVGGATCSKLAKPLHLQYLERSLRLDTFLKQTAAVFNQNISSDDSDDGLGEGSS
LAPCNPLLAVKDDHISPENETKDSCRDGEAECGALNGAVLQEHKADKASLYNFSKLKKSR
KWLKGILLSDDTTDSDTDSDDSDFTMTREELQDMLRLHKFTKLHQSKFHSDRELQHYQHY
STGLLSTHDPFYEQQRHLLGLKKKKIKEEKKCKAKLKKMKKKKKRGEEFSMEGRQHVTKV
FAKFSHDAPLPMIKKKHLTIEQLNARRRKVWLTIAKKEIPKAFKQKVSARNFVLTNARKL
AHQCMREVRRAAIQAQKNCKETLPRARRLTKEMLLYWKKYEKVEKEHRKRAEKEALEQRK
LDEEMREAKRQQRKLNFLITQTELYAHFMGGKQNAGGDGTQEEILRKLEDNTSQRQIDIG
GGVMVNVGQEDYDSDYYKSQALKNAKEAYQIHQARTRLFDEEAKDSRSASLHAASVSGSG
FGESYSLSNPSIQAGEDIPQPTIFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKT
VQSIALLAHLAERENIWGPFLIISPASTLNNWHQEFSRFVPKFKVLPYWGNPHDRKVIRK
FWSQKTLYTQNAPFHVVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSSTSVRWKILLQ
FQCRNRLLLTGTPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDEN
QLSRLHMILKPFMLRRIKKDVENELSDKIEILTYCQLTSRQRLLYQALKNKISIEDLLQS
SMGTAQQAHSTTSSLMNLVMQFRKVCNHPDLFERQEIRSPFHMSLKPFIMSKFLFRHALL
RTSDHAKTKLKQTLLSPFSAQHIQQSLFHRKTEDESSSYSFLRFIDVSPAEMSNIMLQGT
LVRWLALYLSFKSAYRLHHSRLWNEEVEENEAKGRARLGKLCFSHRDLILWLNRPTSFPN
VHSSPILQDLVFMSTGSSLICHTDVVIHSRRSSTQTFRPCQPFQPPKFLLTVTPRVTSVP
MERYCADRSAEYEWRLIRDGGSLIAKQCFLYGSPELACAWAQRSQAFLPQSPGGVMALQQ
RHGWSFIRIPDKESLITDSGKLHTLDLLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRK
HTYMRLDGSSKISERRDMVADFQSRTDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPT
VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLKP
KEVVSLLLDDEELEKKLRLRQEEKRQLEETSKVKERKRKREKYAERKRKEDDPDTKRKKD
GVNVVIPFVPSADNSNLSADGEDSFISVDMDSAMPSPFSEISLSSELQPSSIPADESSSD
MLVIVDEPVSSAPQSRATNSPASIAGSVSDTMNGVSSQDISSPGRGRSGRSRGRPKGSGG
AGKSSSMRKGRGRKSTAGSAAAMAGAMAGAAAASAAAYAAYGYSVSKGIPATGSLQPALI
RSSTTPAFVPTGTSSPQAKGSAVATNSQTLSHGSSQSQHNPTKRGKGPSNHSGR
NT seq
4665 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagagcaggatggcgtgggaggcgccacatgctcaaagttggccaaaccactt
cacctgcagtaccttgagcgatctctccgcctagacacttttctaaagcagactgctgct
gtttttaaccagaacatttccagtgatgacagcgatgatggtttgggcgaggggtcttct
ttggccccgtgtaacccactgctggcagtgaaagatgatcatataagccctgagaacgag
accaaggactcctgcagagatggagaggctgagtgtggcgctctcaacggagctgtgctg
caagaacacaaagctgacaaagccagcctgtataacttctcaaaactgaagaaaagcagg
aaatggctaaagggcatcttgctgagcgatgacaccacagattccgacactgactcggat
gattctgacttcacaatgacacgggaagagctccaggacatgctgcgtctgcacaagttc
accaaactccaccagagcaagttccactctgacagagaactgcagcactatcaacactac
agcacaggcctcctgtccactcacgacccattctacgagcagcagcgacacctgctgggc
ctcaagaaaaagaaaatcaaggaagagaagaaatgcaaggccaagttaaaaaagatgaaa
aagaagaagaaacgaggagaggagttctccatggagggacggcagcacgttactaaagtt
tttgccaagttttcgcatgatgcacctcttcccatgatcaaaaagaagcacttaaccatt
gaacagctcaatgctcgtagacgaaaggtctggcttacaattgccaaaaaagaaatccca
aaggcgtttaaacagaaagtttcagcaaggaactttgttttaaccaatgctcgaaagttg
gcccaccagtgtatgcgtgaggtccggagggcagcgatccaagcgcagaagaactgcaaa
gagactttgccgcgggcacgccgcctcaccaaagaaatgctgctgtattggaagaagtat
gagaaggtggaaaaggagcaccgcaaacgtgctgagaaggaagctcttgagcagcgcaaa
ctggatgaggagatgcgggaggctaagcgtcagcagaggaagcttaacttcctgatcacc
cagacagagctgtatgctcacttcatggggggcaagcagaacgccgggggagacggcaca
caggaggagatcttacgcaagcttgaggacaacacctcccagaggcagattgacatcggt
ggaggggttatggtcaacgttggccaggaggactatgatagtgattattacaagtctcag
gcccttaaaaatgcaaaagaggcataccagatccaccaggccagaaccaggttgtttgac
gaagaagcaaaggacagtcgcagcgcctctctgcacgcggctagcgtgtctggctctggc
ttcggtgagagctacagcttatcaaacccatctattcaagcaggtgaagacatccctcag
cccaccatcttcaatgggaaacttaaaggctaccagctcaaaggcatgaactggctagcc
aatctttatgaacagggcattaatggcattctagcagatgagatgggtcttggaaagacg
gtccagagcattgctttactggctcatctagcagagagggaaaacatctggggacccttc
ttgatcatctccccagcctcaacactcaacaactggcatcaggagttctcccgctttgtc
cccaaattcaaggtgttaccgtactggggaaatccgcacgatcgtaaagttattcgaaaa
ttttggagccagaaaactctgtatacccagaatgcaccatttcatgtggtcatcaccagt
tatcagctggtggtacaggatgtgaagtattttcagagggtgaaatggcaatatatggtt
ctggatgaggcccaagcactgaaaagcagcaccagtgtccgatggaagattctccttcag
ttccagtgcaggaaccgccttttgctaacagggacgccaattcagaacacgatggcagag
ttgtgggccctgcttcacttcatcatgccgactctatttgactctcatgaggagtttaac
gagtggttctccaaggacatcgagagtcatgctgagaacaaatctgctattgatgaaaac
caactttccagattgcacatgatcctaaaaccatttatgctgcgcagaataaagaaggat
gtggagaacgagctctctgacaagattgaaatcctgacatactgccagctgaccagcaga
cagcggctgctttaccaggctctaaagaacaagatctccatcgaggacctgctgcagtca
tcgatgggaacagcccagcaagctcacagcaccaccagcagcctcatgaatcttgtcatg
cagttcaggaaggtttgtaaccacccagacctgtttgagcgccaggagatacgctcacct
ttccacatgtccctgaagccattcatcatgtcaaaatttctgttccgacacgccctcctt
cgcacatctgaccatgcaaagaccaagctgaagcagactctgctttctccattctctgct
caacacattcaacagtccttgtttcaccgaaaaactgaagatgaaagcagcagctattct
ttcttgcgtttcattgatgtgtctcctgctgagatgtccaacataatgcttcaggggact
ctagtgaggtggttagccctatatctgtccttcaaatcagcctaccggctccaccacagc
cgtctatggaacgaagaggtggaggagaacgaggctaaagggagagcccggttaggcaag
ctgtgtttttcacatagagatctcattctgtggcttaaccggccaacgtccttcccaaat
gtccacagtagtcctattctacaggatttagtgttcatgtccacagggtcttcgctaatc
tgtcacactgacgtggtcatccacagcagacgctcatccactcagacgttcagaccgtgc
cagcctttccaaccacccaagtttttactcaccgtcacacccagggtgacttcagttccc
atggaacgctactgtgccgatcgcagtgccgagtatgaatggaggttaatacgagatgga
gggagtctcattgctaagcagtgcttcctgtacggatcccccgagttggcttgtgcctgg
gctcaacgctctcaggccttcctccctcagagcccagggggcgtcatggcactgcagcaa
agacatggctggtccttcataaggattccagacaaagagtctctgatcacagacagcggg
aagcttcacactctagacctgctgctgactcgactgaagtctcagggccaccgagttctc
atctactctcagatgacccgcatgatagacctattagaggagtacatggtgtaccgcaag
catacttacatgagactggatggttcatccaagatttcggagcggcgggacatggtggcc
gacttccagagccggacggatatttttgtcttcctcctcagtaccagagctggaggcctg
gggatcaacctgacagctgcagacacggtgatcttctacgacagtgactggaaccccaca
gttgaccagcaggccatggatcgagcgcacagacttggacaaaccaagcaggtcacagtc
tatcggcttatttgcaaagggacaattgaggaacgcatcctacagagagccaaagaaaag
agtgagattcagaggatggtaatatcaggcggaaattttaaacctgacaccctgaagcct
aaagaggtcgtcagtttgctgctggatgatgaggagctggagaaaaaattgcgtttacgg
caggaagaaaaacgacagctggaggagaccagtaaggtgaaagagcggaagaggaagagg
gagaagtatgcagaaaggaagagaaaggaggatgacccagacactaagaggaagaaggat
ggtgtgaatgtggtcatcccttttgtcccatctgcagacaactccaatctttcggcagac
ggagaagactcgtttatcagtgtggacatggactctgccatgcccagccctttcagtgag
atctcgttgagcagcgagctccagcccagctccattcccgcagacgagagcagcagcgac
atgctggtaattgtggacgaacctgtgtcttctgctccacagtcccgtgcaacaaactct
cccgcttcgatcgccggctctgtgtctgacacgatgaatggtgtctcctcacaagacata
tccagtcctggcaggggaaggtccggtcggagtcgaggccgacccaaaggctctggagga
gccgggaagtcatcttctatgagaaagggacgaggacggaagtccaccgcgggcagtgct
gcagcaatggcaggtgcaatggcaggggcggccgctgcgtctgcagctgcgtatgccgca
tatggctacagtgtttccaaaggtattccagcaactggctccttacaaccggctcttatt
cggtcttcaaccacacctgcctttgttccaactggcacctcctccccccaggctaaagga
agcgccgtggccaccaactctcagactttatcacacggcagttcacaaagccaacacaac
cccactaagagaggcaaaggacccagcaaccacagtgggcggtag
DBGET
integrated database retrieval system
