Labeo rohita (rohu): 127182737
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Entry
127182737 CDS
T09007
Symbol
cpdp
Name
(RefSeq) CPD photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lroh03400
]
127182737 (cpdp)
Enzymes [BR:
lroh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
127182737 (cpdp)
DNA repair and recombination proteins [BR:
lroh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
127182737 (cpdp)
Prokaryotic type
127182737 (cpdp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
127182737
NCBI-ProteinID:
XP_050994254
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All DBs
Position
2:complement(5366863..5374572)
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AA seq
551 aa
AA seq
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MLHIRLFSTCLFIRNSRRTLFRAISHPNRLLHYINMSTNKRNLKRQKETPDSAGGKQPKL
TGGRWRESGWLLKEVTELRRAAQGCEFNKKRLRYLSDTQKIRQGSDGVLYWMSRDQRVQD
NWALIYAQQLALAEKLPLHICFCLVPRFLDATYRQYTFMLKGLREVAKECKSLDIQFHLL
SGEPGQKLPGFVKDWKFGAVVTDFNPLRIPLQWIETVKKHLLSDIPFIQVDAHNVVPCWE
ASEKLEYGARTIRGKITKLLPEFLTEIPLVDTHPHAASRTAKPVDWEEVLSSLEVDRSVG
EVDWAQPGSSGGMAMLESFIDQRLRLFATHRNNPNCDALSHLSPWIHAGQLSAQRVVKQV
KREKNASESVLSFTEELVVRRELADNFCFYNHNYDSISGAYDWAKKTLQDHAKDRRQYLY
TKEQLENAETHDQLWNAAQRQLVLEGKMHGFLRMYWAKKILEWTASPEEALSISLYLNDR
LSLDGCDPNGYVGCMWSVCGIHDQGWAERPIFGKIRYMNYAGCKRKFDVAQFERKYAAVK
ETSNKDTKKSV
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgcttcatataaggttgttttctacgtgcttgttcatcagaaacagcagaagaactcta
ttccgtgccatcagccatccaaacagacttctacattatattaatatgtctacaaacaaa
cgcaacctgaagcgtcagaaagagacgccggacagcgccggtgggaaacagccgaagcta
acgggagggagatggagagagtccggctggctgttgaaggaagtgaccgagctccgcaga
gcagcacagggatgcgagttcaacaaaaagcgcctccgttatttatcagacactcagaaa
atcagacaggggtctgatggggttctctactggatgtcccgcgaccaaagagtccaagat
aactgggcactgatctacgctcagcagctggccttggctgagaaacttcctctgcacatc
tgcttctgcttggtgcctcgatttttggatgcgacctacagacagtacacctttatgcta
aaaggactgcgagaagtggcaaaggaatgcaaaagcctggatattcagttccatctgctg
tcaggagaacctggacagaagctgccaggctttgttaaagactggaagtttggagcagtt
gtcactgactttaaccctctgagaatccctcttcagtggattgagactgttaagaaacac
cttctgtctgacatcccctttattcaggttgatgcacataacgtggtgccttgctgggaa
gcgtctgagaagctggaatatggagccaggacaatacggggcaaaatcactaaacttctg
ccagaattcctcacagagattcctcttgtggacactcatccacacgcagcttctcgtaca
gcaaagccagtggattgggaagaggtgctgtcatctcttgaggtggaccgcagtgttgga
gaggtggactgggctcagcctggttcctctggtggtatggctatgctggagtccttcatc
gaccagcgattgcgtctctttgccactcacaggaacaatccaaactgtgacgccctcagc
catctctccccttggatccacgctggtcagttgtctgctcagcgtgtcgtgaagcaggtc
aaacgagaaaagaacgccagcgagtctgtgttgtcttttactgaggaactggtggtgcgc
agggagctcgctgacaacttctgcttctacaaccacaactatgacagcatttcaggtgca
tacgattgggcgaagaagacattgcaggaccacgctaaggaccgcaggcagtacctttac
acaaaagagcagctggagaacgccgagacccatgaccagctctggaacgctgcacagcgt
cagctggtgttagaaggaaagatgcacgggttcctccgcatgtactgggcaaagaagatc
ctggaatggaccgcgtcccctgaagaagccctctctatttctttatatctgaatgaccgt
ttgtctttagatggctgcgatcccaacggatacgtgggttgcatgtggtccgtctgtggc
atccatgaccagggctgggcagagaggcccatctttggcaaaattcgctatatgaattat
gctggctgcaagcggaagtttgatgtggcgcagtttgagaggaagtacgccgctgtaaag
gagacctccaataaagacaccaagaaatctgtatag
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