KEGG   Labeo rohita (rohu): 127182780
Entry
127182780         CDS       T09007                                 
Symbol
stxbp5a
Name
(RefSeq) syntaxin-binding protein 5a isoform X1
  KO
K08518  syntaxin-binding protein 5
Organism
lroh  Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lroh04131]
    127182780 (stxbp5a)
Membrane trafficking [BR:lroh04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    127182780 (stxbp5a)
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Tomosyn
    127182780 (stxbp5a)
SSDB
Motif
Pfam: LLGL Beta-prop_THOC3 Beta-prop_EML_2 WDR55 WD40_CDC20-Fz Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_RIG_2nd Beta-prop_WDR5 Beta-prop_WDR36-Utp21_1st WD40_Prp19 ANAPC4_WD40 Beta-prop_HPS5 WD40 Beta-prop_IFT140_1st Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR3_2nd Beta-prop_WDR19_1st Beta-prop_RSE1_2nd EIF3I Lgl_C Beta-prop_NUP159_NUP214 Beta-prop_VPS8 Beta-prop_Vps41 Synaptobrevin Beta-prop_Aladin Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 127182780
NCBI-ProteinID: XP_050994319
LinkDB
Position
20:complement(20535805..20646790)
AA seq 1142 aa
MKKFNIRKVLDGLTAVSSPSPSPQLGAKENELIPETLQSEHFQLCKTVRHGFPYQPSSMA
FDPVQKILAIGTQSGALRLFGRPGVECYCQHESGAAVIQLQFLINEGALVSALADDSIHL
WNLRQKRPAVLHSLKFNKERITFCHLPFQSKWLYIGSERGNIHIVNVESFTLSGYTIMWN
KAIELSSKAHPGPVVHISDNPMDEGKLIIGFEAGIVVLWDLKSKRADYRYTYDEAIHSVA
WHHEGKQFICSHSDGTLTIWNIKSPAKPAQTITPHGKQPKDGKKPEPCKPILKVEYKTTR
AGDPFMIFSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEPYA
VVVLLEKDLVVIDLAQNGYPIFENPYPMMIHESPVTCCEYLADCPVDLIPALYSVGSRQK
RQGYSKKEWPISGGNWGLGTQSYPEIIITGHADGSVKFWDASAIMLQVLYKLKTAKVFEK
ARCKDEKPSTEIVDEDPFAIQLMSWCPESRMLCVAGVSAHVIIYRFSKQEITTEVVQLLE
VRLQYELNDLESPEGGGDQTPAPPTPSTSPSPQTTAPQTHTSTSSNSSDGIRDNIPCLKV
RSSPLKQSPGYQVELVVQLVWVSGEPPQQISSLAINSSYGLVVFGNSNGLAVVDYLQKTV
LLNLGTVELYGTNDPYQRQPRSPRKSRQPSGGLCDINEGSATSEDRCKSPTSVLMSNHQQ
FYNGGGRGAKMSRKLSLPTELKPDLVLLSVCPPRGSIPLDNRDNSFSRSRSSSVTSIDKE
AREAITSFYFCETYNRKADGGLTPSLWVGTSLGTILAISLNMPPAGEQRLLQPVIVSPCG
TLVRLKGSILRMAFLDSTGSFLPSAFEPWYEPNAPANGEERDKVRKRRPVSVSPSTSQEL
SENQYAVVCSEKQAKVISLPSQTCVFKHNITETSFVLRADVVQINTGICVACFCANGHIM
TLSLPGLRPLLDVNYLPLTDMRIARTFCFTNLGQALYLTSPTEIQRITYSQEVCENLQEM
LGELFTPVETPEAPNRGFFKGLFGGGAQSLDREELFGESGAGKAPRSLAQHIPGPGGIEG
MKGAASGIVGDLARARIALDERGQKLSEVEERTAAMMASADAFSKHAHEMMLKCKDKKWY
QF
NT seq 3429 nt   +upstreamnt  +downstreamnt
atgaagaagtttaatatccgtaaggtgctggacggcttgacggccgtgtcgtccccttct
ccatccccgcagctcggggccaaggagaacgagctcatcccggagacgctccagtctgaa
cacttccagctctgcaagactgtgcgccatggcttcccctatcagccctcctctatggca
ttcgaccccgtccagaaaatccttgccatcgggactcagagtggcgctttgcgattattc
ggccgacccggtgtggagtgttactgtcagcacgagagtggagcagccgtcatccagctg
cagtttctcataaatgaaggggcgctggttagtgctttggctgatgacagtattcatctg
tggaacctgcgacagaagagaccagctgtgctgcactcactcaagttcaacaaggagagg
ataacgttctgtcatctgcccttccaaagtaaatggctgtacatcggctcggaacgagga
aacatccacattgtgaatgtggagtcctttacgctctcaggatataccatcatgtggaac
aaagccattgaactgtcctccaaggcccaccctggcccagttgttcacattagtgacaat
cctatggatgagggcaagctcataataggatttgaggctgggatcgtagtgctgtgggat
ttgaaatcaaagagagctgactaccggtacacttacgacgaggcgatccattctgtggcc
tggcatcacgaggggaagcagtttatctgtagtcactcagacggcacactgaccatatgg
aatataaagtccccagccaagcccgcacagacaatcacgccacacggaaagcagcctaaa
gatggaaaaaagccagagccttgcaaacccattcttaaagtagagtacaagaccacaaga
gcaggggatccgtttatgatcttctctggtggtttgtcgtatgacaccgttggtcgacgg
ccatgcttgacagtaatgcacggaaagagcacggcagtactggagatggattatcccatt
gtagatttcctcaccctgtgtgaaacgccatatcctaacgattttcaggaaccatatgct
gtagtggtcctcctcgaaaaggatttagttgttattgaccttgcacaaaacggttaccct
atctttgaaaatccatatcccatgatgattcatgagtctcctgtgacgtgttgtgagtac
ttagccgattgtcctgtggacctcatacctgcactttactctgtcgggtctcgccagaaa
cgacagggctacagcaaaaaggaatggcctatcagtggcggaaactggggcctgggcaca
caaagctaccctgaaataataataactgggcatgcagatggttcagtgaagttctgggat
gcttcagcaataatgctccaggtgctgtacaagctgaagacagctaaggtgtttgaaaag
gcacgctgtaaggacgagaaacccagcacagagattgtggacgaggacccgttcgccatt
cagttgatgtcttggtgtcccgagagccgcatgctttgcgtggctggtgtctctgcccat
gtcatcatatacaggttcagcaaacaggaaatcaccacagaagttgtgcagttactggag
gtcaggttacagtatgagctgaatgatctggagtctccggaagggggaggagatcagaca
ccagctcctcccacaccaagcacctcccccagtccacaaaccaccgctcctcagacacac
acctccactagcagcaactcatcagatgggattcgagacaacataccctgcctcaaggtg
cgcagcagtcctctgaagcagtctccagggtatcaggtggagctggtggtacagctggtg
tgggtcagtggagagccgccccagcagatcagcagcttggccatcaactcctcctatggc
ttggtggtgtttggcaatagcaacggtctggcagtagtggattacttacagaagactgtt
ctgttgaatcttggaactgtggaattgtacggcactaatgacccgtatcagagacaaccg
cgatctccccgcaagagccgacagccttctggagggctttgtgacattaatgagggctca
gccacctcagaggatcgctgcaaatcccccacctcagtcttgatgtcaaaccatcagcaa
ttctacaatggaggagggagaggagcaaagatgtcacggaaattaagcttgcctactgag
ctaaagccagacttggtcctactctctgtatgtcccccgcggggttccatacccctagac
aacagggacaactccttcagccgctcacggagctccagtgtgaccagtatcgacaaggaa
gcacgagaggccatcacatctttctatttctgtgagacgtacaaccgcaaagcagatggc
ggacttacacctagtctgtgggttggcacatctttgggtacaatcttggcaatctccctc
aacatgccccctgctggagagcagaggcttctgcagccagtcattgtctccccttgtggt
actcttgtcaggttgaagggtagcatcctccggatggcgttcctagattctacagggtct
ttcctcccttctgcttttgagccatggtacgaacccaacgctccagccaatggagaggag
cgggacaaggtccgtaagagacggccggtgtctgtctccccatccacatcccaggaactg
agtgaaaaccagtatgctgtggtatgctctgagaaacaggccaaagtcatatccctgccc
tctcagacctgcgtatttaaacacaacatcaccgaaacatcttttgtgctgcgggcagat
gtggtacagattaacactggcatttgtgtggcctgcttctgtgccaatggacacatcatg
accctcagtctgccagggttgagaccactgctggatgtaaattacctacccctgacagat
atgcggatagccagaacgttctgcttcaccaacctcggccaggctttgtacctgacttcc
cctactgagatccaaaggatcacctacagccaggaggtctgcgagaacttgcaggagatg
ctaggtgagctgtttactccagtggagacgcctgaggctcctaacagaggattctttaag
ggactgtttggaggaggagcacagtctctagacagagaagagctcttcggcgagtcagga
gccggaaaagcaccacgcagtctcgctcagcacattccaggtcctgggggtatagaaggc
atgaagggggcagcgtcaggcatcgtgggtgatttagctcgagctcggatagcgttggat
gagagagggcaaaaactgagcgaggtggaagagcggacggcagccatgatggccagtgct
gacgcattctccaaacacgctcatgagatgatgctaaagtgtaaggataaaaaatggtac
cagttctga

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