Labeo rohita (rohu): 127182835
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Entry
127182835 CDS
T09007
Symbol
si:dkey-183n20.15
Name
(RefSeq) RING-HC_RNF170 domain-containing protein
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127182835 (si:dkey-183n20.15)
Enzymes [BR:
lroh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127182835 (si:dkey-183n20.15)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127182835 (si:dkey-183n20.15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
RING_XB3-XBAT31
zf-C3HC4_2
zf-RING_2
zf-RING_5
DUF1232
Motif
Other DBs
NCBI-GeneID:
127182835
NCBI-ProteinID:
XP_050994427
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All DBs
Position
20:complement(16319993..16328062)
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AA seq
282 aa
AA seq
DB search
MVYCVQDTVQPIKTEIRGDWQSSKQIIWEAVRKHSALCLPREKATELRTRNMPSSRSFHS
RSSLLSKIRSQGQPHNPHMNNKEDLPKMWLPSGNRDNHCPVCLQIASYPVETNCGHLFCA
PCLISYWKHCSWLHAISCPLCRQTVNKMCHLFSETRADCKETEVLKHVRDYNKRYSGAPR
QVKDYLCDTPLFLLFLVRWLGNMGGLVWLFLLRVAVCGFGAAMSLASPLETLPGPLSSVL
GMLDDFVVVFLLLICIININQQMGPQRTRTHSVTQGVLTDAL
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggtgtactgcgttcaggacaccgtgcagccaatcaaaacagagatccgaggagactgg
cagagcagtaaacaaataatttgggaagcagtaagaaagcattccgctctctgccttcca
cgagagaaagcaactgaattacgaacaagaaacatgcctagcagccgcagcttccacagc
aggtcttctctactctcaaagataaggagtcaagggcagccacacaatcctcatatgaac
aacaaagaggatttgcctaaaatgtggcttccatcaggcaacagggacaatcactgccct
gtgtgtttacagatcgccagctatcctgtagagaccaactgcgggcatcttttctgtgca
ccatgtctgatatcttactggaaacattgctcctggttacatgccatcagctgtcctttg
tgcagacagacggtgaataagatgtgccatctgttcagcgagaccagagctgactgtaaa
gagacagaagtgctaaaacatgtcagagactataacaagcgctactctggagcaccaaga
caggtaaaggattacctgtgcgatacacccctcttcctgctctttctggtgcgatggctg
gggaacatgggtggcctggtgtggctgtttctcttgagggtggctgtctgtggatttggc
gctgccatgtctttggcctccccactggagactcttcctgggccgttaagcagtgtgctg
ggcatgctggatgattttgtagtggtcttccttcttctcatctgcattattaacatcaac
caacagatggggccgcagaggacaagaacgcactcggtcacgcagggtgtgctgaccgac
gcattgtag
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