Labeo rohita (rohu): 127182837
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Entry
127182837 CDS
T09007
Symbol
med23
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lroh03021
]
127182837 (med23)
Transcription machinery [BR:
lroh03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
127182837 (med23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
bCoV_SUD_M
Motif
Other DBs
NCBI-GeneID:
127182837
NCBI-ProteinID:
XP_050994432
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All DBs
Position
20:complement(1087382..1145008)
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AA seq
1388 aa
AA seq
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MAVPMESQLQSIFEEVVKTEVIEEAFAGMFMDSPEDERTKLVSCLGAFRQYWSSLPQESH
DQCVQWIVRFIHSQHSPKRIAFLYDCLAMAVETSLLPPRMVCQALISSDSLEWERTQLWA
LTFKLIRKIIGGVDYKGVRDLLKAVLDKIQTVPNFVSSAVVQQLLAAREVVEYILDRNAC
LLPAYFAVTEIRKLYPEGALSHWLLGSLISDFVDSFRPTARINSICGRCSLLPVVNNSGA
ICNSWKLDPTTLRFPLRGMLPYDKDLFDPQTGLLRYVLEQPYSRDMVCNMLGLNKQTLNI
AQHKQRCPVLEDQLVDLVVYAMERSETEEQFDDGGTSQLLWQHLSSQLIFFVLFQFASFP
HMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKECIP
VPDINKPQSTHAFAMTCIWIHLNRKAQNDNSKLQIPIPHSLKLHHEFLQQSLRNKSLPMT
DYKIALLCNAYSTNSECFTLPMGVLVETIYGNGSMRITLPGTNCMASGSVTPLPMNLLDS
LTVHAKMSLIHSIATRVIKLAHAKSSLALAPALVETYSRLLVYMEIESLGIKGFISQLLP
NVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQLLSHLHSLAAVPQTNQNQLHLCVESTAL
RLITALGSSEVQPQFTRFLNDPKTVLSAESEELNRALILTLARATHVTDFFTGSDSIQGT
WCKDILQTIMNFTPHNWASHTLSCFPAPLQAFFKQNNVPQESRFNLKKNVEEEYRKWKSM
TVENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGFRVLERIGARALVAHVRTFADFL
VYEFSTSAGGQQLNKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLL
LKPNDFRNRVSDFVKENAPEHWLQSDWHTKHMTYHKKYPEKLYFEGLAEQVNPPIQLHLQ
YLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLH
YYERHLRDRTNLKRKLVHAIMSSLKDNRTPGWCLSETYLKCGMNPRDDNVWIPDDTYYCK
LIGRLVDTMAGKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALAVPGKDVGNALLNVV
LKSQPLVPRENITAWMNAIGLVITALPEPYWIVLHDRIVSVISSPVLSSEMEWVGYPFQL
LDFTACHRSYSEMHCSYILALAHAVWHHSSIGQLSLIPKFLSEVLKPIVKTEFQLLYVYH
LVGPFLQRFQQERTRCMLEIGVAFYEMLQAVDQHSKHLAYMDPICDFLYHIKYMFTGDSV
KDQVERIICSLRPAMRLRLRFITHISKMEPAAAAAASTATSVPQSTSVSSPAAQSGAGPS
NIPLSVAQ
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcccgatggaaagtcagctgcagagtatttttgaggaagtagtgaaaacggag
gtgattgaagaggcttttgctgggatgtttatggacagtccggaggatgagaggaccaaa
ctcgtgagctgtttaggagcgttcaggcagtactggagctctctgcctcaggagtcacat
gatcagtgcgtgcagtggatcgtccgcttcattcatagtcagcacagccccaagcgcatc
gccttcctctatgactgtctggccatggcggtggagaccagcctgctgcctcccagaatg
gtgtgtcaggctctgatcagctcagacagtctggagtgggagaggactcagctttgggct
ttgaccttcaaactcatccgcaaaatcattggaggagtcgactacaagggtgtgagggat
ctgctgaaggccgtgttggacaagattcagaccgtcccaaacttcgtgagctcagctgtg
gttcagcagctgctcgcagcacgagaagtggtggagtacatactggaccgcaacgcttgt
ctgctgcccgcgtacttcgctgtgactgagatcaggaagctgtatccggagggtgcgctg
tcacactggctgttgggcagcctgatatctgactttgttgatagtttcagaccgaccgcc
cgtattaactccatctgcggtcgctgcagtcttctgccagtggttaataattctggcgcc
atttgtaattcgtggaaactggacccgaccactctgcgtttcccactgaggggaatgctg
ccctatgataaggacctgtttgatccgcagacgggtctgctgaggtatgtgctggagcag
ccgtactccagagacatggtgtgcaacatgctgggcctcaacaaacagaccttgaacatt
gctcagcacaagcagagatgtccggttctggaggaccagctggtggatctggtggtgtac
gccatggagcggtccgagacggaggagcagttcgacgacggcggcaccagtcagctcctg
tggcagcacctctccagccagctcatcttcttcgttctgttccagttcgccagcttccct
cacatggtgctgtcgctccatcagaagcttgctggtcggggtttgatcaaaggcagggat
cacctgatgtgggtgctcctgcaattcatctcaggaagcattcagaagaacgctctggct
gatttcctgcctgtcatgaagctgtttgacctgctgtacccggagaaggagtgtattcca
gtcccggacatcaataagcctcagtccactcatgccttcgcaatgacctgcatctggatc
cacctgaaccgcaaagctcagaacgacaactccaaactccagatccccatcccacactcg
ctcaagctgcaccacgagtttcttcagcagagcctgcgcaataagagtctgcccatgacc
gactataagatcgcactgctgtgtaacgcgtactccacaaactccgagtgcttcactctg
cccatgggggtcctggtggagaccatctacggtaacggcagcatgcgcatcactctgccc
ggcaccaactgcatggcgtccggctccgtcacgcctctacccatgaacctgctggactcc
ctcactgtccatgctaagatgagcttgatccacagcattgcaacccgtgtcattaaactg
gcccacgccaagtctagtcttgctctggcccctgccttagtggagacgtacagcagactg
ctggtctacatggagatcgagtcccttggcattaagggctttatcagtcagcttctgccg
aacgtgttcaagtcgcacgcgtgggggattctgcacacactgctggagatgttcagttat
cgcatgcaccacattcagcctcattaccgtgtgcagctcctgtcacaccttcactcgctc
gccgctgttccacagaccaatcagaaccagctgcacctctgtgttgagagcaccgctctg
aggttgatcacggctctggggagttcagaggttcagccgcagttcacacgtttcctcaat
gaccctaaaactgtgctgtctgctgagtccgaggagctgaaccgagcgctgatcctcacg
ctggctcgagccacacacgttacagatttcttcactggctcggactccattcaggggacc
tggtgtaaggacatcctgcagaccatcatgaacttcacacctcataactgggcctctcac
actctcagctgtttccctgctcctctacaggcattcttcaagcagaataacgttccgcag
gagagtcgttttaacctgaagaagaacgtggaggaggagtacaggaagtggaagtctatg
accgtggagaacgacatcatcacacacttctccatgcagggctcgccacctctcttcctg
tgtctgctgtggaagatgctgctggagacggaccacatcaatcagatcggcttcagggtg
ctggagcgcatcggggcgcgggcgctggtggctcacgtgcgaacgtttgcggatttcctg
gtgtacgagttcagcacgtcagcaggaggacagcagctgaacaagtgcatcgagattctc
aatgacatggtgtggaagtacaacatcgtgacgctggacagactcatcctgtgcctggcg
atgaggagtcacgaggggaacgaggctcaggtctgctacttcatcatccaacttctcctc
ctcaaacccaacgacttccgcaaccgcgtgagtgattttgtgaaggagaacgctcccgaa
cactggctgcagagcgactggcacaccaaacacatgacctaccacaagaagtatccagag
aagctgtacttcgaaggtctggcagagcaggtcaatcctcccattcagctgcacttacag
tacctgcccatctacttcggtaacgtgtgtctgcgcttccttcccgtgttcgacatcgtc
atccatcgcttcctggagctgctgcctgtgtccaagtctctggagacgctgctcgatcac
ctcggggggctctacaagttccatgatcgtccggtgacgtacctgtacaacacgctgcac
tattacgagagacacctgcgagatcgcaccaacctgaagaggaagctggtccacgccatc
atgagctcactcaaggacaaccgcacacctggctggtgtctcagtgagacgtacctgaag
tgtggcatgaatcccagagacgacaacgtctggattcccgacgacacgtactactgcaaa
ctcatcgggcggctcgtggataccatggcaggtaaatctccagggccgttccccaactgt
gactggcgctttaacgagtttccaaacccggccgctcacgcgctgcacgtcacctgtgtg
gagctgatggctctggccgtgccggggaaagacgtgggcaacgctctgctcaatgtcgtg
ctcaaaagtcagccgctggttcctcgggagaacatcacagcgtggatgaacgctatcgga
ctggtcatcactgccctgcctgagccgtactggatcgtgctgcacgaccgtatcgtgagt
gtgatcagcagtccggttctgagttcggagatggagtgggtcggttacccgttccagctg
ctggacttcaccgcctgtcaccgctcgtactcagagatgcactgcagctacattctagcg
ctggcacacgccgtctggcatcactccagcatcggacagctctcccttatacccaagttc
ctgtcggaggtgctgaagcccatcgtgaagacggagttccagctactttacgtgtatcac
ctggtggggccgtttctgcagcgcttccagcaggagaggaccagatgcatgctggagatt
ggagtggcgttttatgagatgcttcaggctgtggatcagcacagtaaacacctggcctat
atggaccccatctgtgacttcctgtaccacatcaaatacatgtttactggagacagcgtc
aaagaccaggtggagaggatcatctgttcgctgaggccggcgatgcgtctccgtctgcgc
ttcatcactcacatcagtaagatggagcctgcggcggcagcggctgcgtccacagcgacc
tccgtccctcagtccaccagcgtctcgtcccccgcggcccagagcggagccggaccctct
aatattcctctttctgtggcccagtga
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