Labeo rohita (rohu): 127182847
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Entry
127182847 CDS
T09007
Symbol
aplf
Name
(RefSeq) aprataxin and PNK-like factor isoform X1
KO
K13295
aprataxin and PNK-like factor [EC:3.1.-.-]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lroh03400
]
127182847 (aplf)
DNA repair and recombination proteins [BR:
lroh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
127182847 (aplf)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
127182847 (aplf)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHH
FHA_2
FHA
Motif
Other DBs
NCBI-GeneID:
127182847
NCBI-ProteinID:
XP_050994575
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All DBs
Position
1:complement(16498962..16550222)
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AA seq
480 aa
AA seq
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MPGFELEQVDGGSPIDLPYGETVLGRGPFLGVNDKRVSRNHGILENLNGQLRLKPTHLNP
CFIQTNIVAQPQPLEKDEWHCLKEGDIFSLMPGKYIYRVHVKEDDQTPRNSQAFEEAMEV
EKCSSGPAAPSLDSATLEANSYTPTTPSATLIEDKEAGDSSHALSGLKETPTKSQKDESD
VPQKKRILPAWMLTIAKGESSAVKATPTKAKRVATPKRAAGPKRARATRVSSEEEEEEEE
EEEMPKRKAKRLKSDSEVESKPLDDATAPKSSRVGSVSDGANGTGSMERDDGERRGGGRG
AEDKPGAQAEDLQTQAEDVSDSQASQGRPQRSKITESQTSTSTVKKRQRTPCPYGSSCYR
KNPVHFQECSHPGDSDYEEEEADEADDDRPECPYGTHCYRKNLLHKKDYKHTKSPPKTAA
AADEDEDEDEDQYENSFINDESEEEEVDEDSDYVPESDDGGKEDIKRLQKEAKAFLRRKK
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgccaggcttcgagttggagcaggtggacggtggcagtcctatagatctgccctatgga
gaaacagtcttggggagaggaccatttctaggagtgaatgataagagagtgtccaggaac
cacggcatccttgagaacctgaacggccagctgcgtctgaagcctacacacctgaaccca
tgttttattcagacgaacattgtggctcagcctcagcctctggagaaggacgagtggcat
tgcctaaaggagggcgatatcttctctctaatgcctgggaaatacatttacagagtgcat
gtcaaagaagacgaccaaacccccagaaacagtcaggcgtttgaggaggcgatggaggtg
gagaagtgttcgagtggaccagcagcgccctctctagactcggccacacttgaagccaac
agctacacgcccacaaccccgagcgccacactcatagaagataaagaagcgggtgattct
tcacacgctctttctggtctcaaagagacacccacaaagagccaaaaggacgagtctgat
gtgccacagaagaagcggatcttgccggcctggatgttgaccatagccaaaggtgagagc
tcagcggtgaaagcgacccctacaaaagccaaacgagttgctacacccaagagggcagct
ggacccaaacgggctcgagccacacgggtgtcatctgaggaagaggaggaggaggaggag
gaggaagagatgcccaaaaggaaagcaaagagactgaagagtgactctgaagttgagtct
aagcctctggatgatgcaaccgctcctaagagcagtagagtcggatcagtctcagacggc
gcgaacggcaccggttcgatggagcgtgacgatggggagagaagaggaggtggcagggga
gctgaggacaaaccaggagctcaagctgaagacttacagacacaggcagaagatgtcagt
gattctcaggccagccaaggacgcccacagaggtcgaagatcacagagagccaaacaagc
accagtacggtgaaaaagcgccagcgaacaccatgtccttacggcagctcttgctacagg
aaaaatccggtccactttcaggagtgcagtcaccctggagacagcgactatgaagaagag
gaggcagatgaagctgacgatgacaggccggagtgtccgtacggcactcactgctacagg
aagaatctgcttcacaagaaagattacaaacacactaaatcaccacccaagaccgctgca
gctgctgatgaggatgaggatgaggatgaagatcaatatgaaaacagttttattaatgac
gagagtgaggaggaagaggtggatgaagactcggactacgtgcctgaatcggacgacggt
ggcaaagaggacattaaacggttgcagaaagaagcaaaagcattcctcaggaggaagaag
tga
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