Labeo rohita (rohu): 127182867
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Entry
127182867 CDS
T09007
Symbol
psmc6
Name
(RefSeq) 26S proteasome regulatory subunit 10B
KO
K03064
26S proteasome regulatory subunit T4
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
127182867 (psmc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
lroh03051
]
127182867 (psmc6)
Proteasome [BR:
lroh03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
127182867 (psmc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_16
AAA_2
AAA_22
AAA_5
PRS7_OB
RuvB_N
nSTAND3
DUF815
AAA_14
Prot_ATP_ID_OB_N
AAA_7
Csa3_N
AAA_11
AAA_lid_PRS2_C
TIP49
AAA_33
RNA_helicase
AAA_3
NPHP3_N
AAA_18
Mg_chelatase
bpMoxR
DUF5906
AAA_28
TsaE
AAA_24
ATPase
NACHT
DUF3829_2nd
Occludin_ELL
AAA_25
AAA_17
Parvo_NS1
IstB_IS21
ATPase_2
DUF4140
COG4_N
Med4
Motif
Other DBs
NCBI-GeneID:
127182867
NCBI-ProteinID:
XP_050994492
LinkDB
All DBs
Position
20:6288010..6295790
Genome browser
AA seq
389 aa
AA seq
DB search
MADNREKGLQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEV
LKQLTEEKFIVKATNGPRYVVGCRRQLDKTKLKPGTRVALDMTTLTIMRYLPREVDPLVY
NMSHEDPGSVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGK
TLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG
RRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH
IELPNEQARLDILKIHSGPITKHGDIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHE
YVTQEDFMKAVRKVADSKKLESKLDYKPV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacagggagaaaggtttacaagattacagaaaaaaattactggagcataaa
gagattgacggacgccttaaagaattgagagagcagttgaaggagctcaccaaacagtac
gagaagtctgagaatgatctgaaagctttacagagtgtaggacagattgttggtgaggtg
ctgaaacaactgacagaggagaaatttattgtcaaagcaactaatggcccacgatatgtg
gttggatgtcgcagacagctggataaaaccaagcttaaaccaggcactagagtggctctg
gatatgacgactcttactatcatgaggtatttgcctcgtgaagtggatcctctagtgtac
aacatgtcccatgaagatcctggcagcgtttcttactcagagatcggtggattgtctgag
cagatccgtgagctgagagaggtaattgagctgcctctgaccaatcctgagcttttccag
agggtgggcattattccccccaagggctgcctgctgtatggaccaccaggcactgggaag
actcttcttgccagagctgtggccagtcagcttgactgcaatttcctgaaggtggtgtcc
agctccattgttgacaagtacattggtgagagtgccagactcatcagagagatgttcaac
tacgccagagaccatcagccttgcattatcttcatggatgaaatcgatgctattggtgga
cgtcgattttctgagggaacctctgcagacagagaaatccagaggacactgatggagctg
ttgaatcagatggatgggtttgacaccctgcatagagtcaagatgatcatggccaccaac
cggccggacactttagaccctgccctgctacgtcctggccgtctggacagaaagatccac
attgagttgcccaatgaacaggctcgactggacatcctgaagatccactctggtcccatc
accaagcatggagatattgactatgaagccatcgtcaagctttcagacggtttcaatgga
gctgatttgaggaatgtgtgcactgaagctggtatgtttgccattcgtgccgaccacgag
tacgtgacccaggaggatttcatgaaagctgtgaggaaggtggcggactccaagaagctg
gagtccaaactggactacaaacctgtataa
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