Labeo rohita (rohu): 127182900
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Entry
127182900 CDS
T09007
Symbol
lama2
Name
(RefSeq) laminin subunit alpha-2 isoform X1
KO
K05637
laminin, alpha 1/2
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04510
Focal adhesion
lroh04512
ECM-receptor interaction
lroh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127182900 (lama2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127182900 (lama2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
127182900 (lama2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
DUF948
F5_F8_type_C
FUSC
Tropomyosin
Motif
Other DBs
NCBI-GeneID:
127182900
NCBI-ProteinID:
XP_050994550
LinkDB
All DBs
Position
20:420131..644338
Genome browser
AA seq
3218 aa
AA seq
DB search
MNRPCILVLIGLLWRCCGAQQRGLFPAVLNLASMAEIETNATCGETGPEMYCKLVEHVPG
QPVKNPQCRTCNLKSDYDYERHPIKYAIDGTNKWWQSPSIMNGMDYHYVTVTLDLQQVFQ
IAYVILKAANSPRPGNWVLERSLDGETYTPWQYYAITDTECITRFNVVPRTGPPSYIHDD
EVICTSFYSKIHPLENGEIHTSLINGRPSADDPSPTLLNFTSARYIRLRFQRIRTLNADL
MTLALNDPRDIDPIVTRRYYYSIKDISVGGMCICYGHAKACPLNQYTKKFSCECEHNTCG
ESCDRCCPGYNQKPWMAGTFLTRHVCEKCNCHGKSEECYFNHTVGDAKLSLNIHGEYEGG
GVCLGCSENTVGINCQSCEDGYYRPKEVRPDEHWPCRRCSCDLRGSLHSACVPDESQATE
GLAVGSCICKQGYAGEKCDRCAFGYTGFPLCERCNCSSEGSINQDPCQPPCVCKEHVEGQ
NCDRCKQGFYNLRGDHPHGCEKCYCSGLASLCTESHWDYSNVTDMSGWYLTGADGEGLVW
AVPSRETAHQVTVSQSDAQTYLRAPYYWSAPPAYLHKKLLAYGGRLVYSLSYDTESQDDP
VRIISAPDVIIEGGGLRLIDSSSGVTVYPFSTAEHRIDLLPESFQHHASGLAVSKRDFHS
VLNNIERLLLRASYAQEHSAIYRLGRVSMSVAAEGSGSGVQARAVEVCQCPPGYDGTSCE
MCAVGYRRVNGTLYRGVCELCQCHGHAEHCDDVTGHCLDCRDHTVGPYCDRCASGYYGDA
TRGTADDCQPCACPLLSPSNNFSPTCHVDARGEVICDRCQPGYTGARCDRCANGYFGRPN
IPGGSCQPCMCNGNLDLTEDLSCDPVTGACLRCREGYDGPDCERCADGYFGDALIAKNCQ
ACQCHTNGSLSELCHQETGQCQCRQHVVGRQCDECMPNCWWDSETQLCRPCQCSARGSVS
QRCDSDGRCICRAGYVGRRCDLMRPPHARRETRRPVQQVPIQHIQRWESRGGCPRGAYRP
GTGSGLHMQGAQGCVPCHCNSFGSKSFDCDESGQCRCQPGVTGQKCDRCAPGHFSFQEGG
CTPCQCAHVGNNCDANTGQCVCPPNTVGERCDKCAPNHWGHDISSGCKPCGCNALGSVAQ
QCNVNTGCCMCREQFRGEKCDECKLGYRDFPQCISCQCTAAGSSLDTCDAESGLCACADR
SGHCSCKANVEGVKCDRCKVGSFGLSHRNPLGCSQCYCFGLSSSCTEATGLIRMRLTLMP
EQTVLPLVDKSSRQEITAGVSFQHPDIIANADVVQQHLSEPYYWRLPKQFKRSMITAYGG
KLKYAIYYEARDETGRTSYEPQVIIKGGPNKDKVMVRHMPALQIGQLTRHEIDITEHEWK
HQDDRPMSREDFMDVLFHVEYILIKASHGSVMRHSRISEITLEVAEVGTPSQDSEIAHQI
EKCDCPLGYAGLSCEECAAGFYRLSVHAGGAASRAGFGTCVRCQCNGHSDSCDPETAVCQ
NCQHNTVGDKCERCAAGFYGVVRGFTNDCKPCACPLLNPENNFSPTCQMEGFNDYRCTAC
PEGYEGKHCERCAPGFHGNPSVLGGRCEECKCDPYSAFPTACDPRTGQCQCRPGASGLKC
DQCMERHVCGPEGIVSCDDDCAGLLIRDMDRLLRLIGSVNLTLPLPLPYKVLYRFENMTE
ELKHMLSPQRAPERLLQLADSNLGSLVTEMDELLSRATKVSADGEQTAADAERSRKGAEE
LGLYVRNTLLAAEALRDKARELNATLGSRDGTPEKSVNEMNDEIQAMLAELRKRQLSGKK
NIADEELGAAEALLAKVKRLFGDPHQATEDLKKEVSDKMGDYRQKLEEAQDLLRDAHNKT
KQAEGLADNNQLNLDRLQGKRDVAGKKKKEMEGILAEGEKMLDEANALSDSINRGKEELE
EMARELGPLHDQLDFKVARLGRGLDDSIPDLLLRAEDHAGQLNDSAAILDSILAEAKNLS
FNATAAFKAYTNIKNYIDEADKVAKEAKKTSIDALQLASGPKGSLKDQAKGSVQKSHRLW
NEAKELQNDVKENGDNLGALQFRLKGANKKNKDLQKGLNDTIEKLNAIPDDLAAKIQATK
LKAADANDTAIDVLNRLKDMNLNLMGLKRNYSKLEDDVKKANNLIKDPEKNIHAAGAKVK
DLENEADRLLEKLKPIQELQDNLKKNISQIKELINQARKQANSIKVSVSSGGDCIRTYRP
DIKKGRYNTIILHVKTVAADNLLFYLGSAKYVDFLAIEMRKGKVNFLWDVGSGVGRVEYP
DLIINDGNWHRIEASRIGLNGTISVHALEGPKTGILPTLRSAKSPESFTVLDVDQNAYLF
VGGMLGSVKKADAVKTTTFSGCMGETSLDGKPIGLWNYRERGGDCAGCVVSPQPADTEGT
VQFDGEGYAAVSRPTRWNPNVSTVMFKFRTFSTDALMMYFATKDMKDFMSAELSDGKVKV
SYDLGSGTGSIISDKRYNDGKWKSFTISRMKKEATITIVNIDTNEDEQLRMASPGGATGL
NLREDERMYFGGVPKAGNYRSEVVLKRFSGCMKDIEVSRTPYNLLSSPDYTGLTKGCSIE
NLHTVSFPKPGYMELKPVSFDVGSEISLSFSTKSENGIILFGRGGLTSMTQLTQGLTPVH
IPRRSRRQTGEPFLSVQLNKGALEVLVFTGSRTPRRAFRKAEKGILHDGREHSLRIQRLP
GASFTVQVDEEPLFQQPLPNDHPLSIHRLFIGGIPSDVETGVQRPNVPFEGCIWNLLINT
VPMDFSQPVAFENAEIGHCPDLAPPPPPPKTPEEEEEEEEEEAPPKPALKPTEAVRPPPP
ASTAAPFAEVMPITDAPTSVKEPAVSCAAEAEPVVLELAKQFGLSRNSHMAFEFDDRKVK
NRLIIEFDIRTEADSGLVFYMARINHADFATIQLKEGMAHLSYDLGSGNTSVSVPRIIND
GQWHKIRVIREKQRGILLIDGRYSKHTTSPKKADILDVVGMLYVGGLPLNYTTKRIGPVL
YSINACIRNFKMLNLPLDMEKPTSSYRVGSCFANPEKGTYFDGTGYAKVVDSYRVGNDVS
VDLEFRTSQSSSVLLGVSSQKMDGLGIELVNGKLLFHADNGVGRFTAVYEPDPEAGLCDG
QWHSVSAHKLKHRLELIVDGKKSEAASSDVRSASADTQDPVYVGGYPEGLKQFGLTINTP
FKGCMRNVKITKAGKTLEVQMNKVLELKGVQPLTCPAS
NT seq
9657 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaccgtgtattctcgtgctcatcgggctgctgtggcggtgttgtggagctcag
cagagaggtctcttcccagctgtgctgaacctggcctcgatggcagagattgagaccaat
gccacgtgtggagaaacaggaccagaaatgtactgcaaactagtggagcacgtaccagga
cagcctgtgaaaaatcctcagtgtaggacctgcaacctgaagagtgattatgattacgag
cggcatcccatcaagtacgccatcgacggcactaacaaatggtggcagagcccgagcatc
atgaacgggatggactaccattacgtcactgtgactctggacctgcagcaggtcttccag
atcgcttatgtgatcctgaaagctgcaaactcccctcggcctggaaactgggttctagaa
cgttctttggacggtgaaacatacacgccgtggcagtattatgcgattacagacacagag
tgcatcacacgcttcaacgtcgtccccagaacaggcccgccatcctacatccatgatgat
gaggtcatctgtacttccttctactctaaaatccatcctctggagaacggcgagattcac
acctcactaataaacggccgtcccagtgcggatgatccatcacccacattactcaacttc
acctcggcacgctatatccgcctgcggttccagaggatacgtaccctaaatgctgacctc
atgaccctcgccctcaatgacccccgagacatcgaccccatcgtcaccagacggtattac
tactccattaaggatatatcagtaggaggcatgtgcatctgttatggtcatgctaaggcc
tgccctctcaaccagtacaccaagaaattcagctgtgagtgtgaacacaacacttgtggc
gagagctgtgaccgctgttgccctggttacaaccagaaaccctggatggcgggaaccttc
ctcacacgccatgtctgtgaaaagtgtaactgccacggcaaatcagaggagtgctatttc
aaccatactgtgggtgatgctaagctgagtttgaatattcatggtgaatatgaggggggc
ggagtctgccttggttgctctgaaaacacagtaggcattaactgtcaatcatgtgaagac
ggctactatagaccaaaagaggtgagaccagacgagcactggccctgcagacgctgctca
tgtgacctgagaggttcactgcactctgcatgtgttccagatgagagtcaggccaccgaa
ggtttggcagtgggctcgtgcatctgtaagcagggatacgcaggtgagaagtgtgacagg
tgtgcgtttggatatacaggattccctctgtgtgagcgatgcaactgcagcagtgaaggc
agcattaaccaggatccctgccagccgccctgtgtgtgtaaggagcatgtggagggacag
aactgcgaccgctgtaaacagggattctataatctccgtggagaccatccccatggatgc
gagaagtgctactgttctggtctagccagcctgtgtactgaatcccactgggactacagt
aatgtgacagatatgtctggatggtatctgacaggagcggatggggaggggcttgtgtgg
gcggtgcccagcagagagacagcccaccaggtgaccgtgagccaatcagatgcacagact
tacctgagagcaccatactactggagcgccccgcctgcttacctgcacaagaaactcttg
gcgtacggaggccggctggtgtattcgctctcttatgacacagaaagccaagacgaccct
gttcgcatcatcagcgctcctgatgtcatcatagagggtggcggactgaggttgattgac
agcagctccggggtcacggtgtatcctttctccacagctgagcacaggatagatctccta
cccgaaagctttcagcatcacgcctcaggactggccgtcagtaaaagagacttccacagc
gtcctcaacaacattgagcgtctgctgctccgggcctcctacgctcaggaacacagcgcc
atctacaggttgggccgtgtgagcatgagcgtggctgccgagggctcgggcagcggagtt
caggcccgcgctgtggaggtgtgccagtgtcctcccggatatgatggcacttcctgtgag
atgtgtgcagtgggctaccgcagagtgaacgggacgctgtatcgcggcgtgtgtgaactc
tgtcaatgccacggacacgcggagcactgcgatgacgtcactggacactgcctggactgt
agggatcacactgtagggccgtactgtgaccggtgtgcttctggatattatggagacgcc
accagaggaactgcagacgactgtcagccatgtgcttgtcctcttctcagcccatcaaac
aatttcagtcccacatgtcacgttgatgccagaggtgaggtgatctgcgatcgatgccag
ccgggttacacgggtgcacgctgtgacaggtgtgctaatggctatttcggtcgtcccaac
attcctgggggttcctgtcagccgtgtatgtgtaacggaaacctggatcttacagaggat
ctcagctgcgacccggtgactggagcctgtctgcgctgtcgtgagggatatgatgggccg
gactgtgaaaggtgcgctgacggatattttggagatgccctcatagccaagaattgccaa
gcatgtcagtgtcacactaacgggtcgctctcagagctgtgccatcaggagaccggacag
tgccagtgccgacaacatgttgttggacgtcagtgtgacgagtgtatgccaaattgttgg
tgggacagtgagactcagttgtgtaggccgtgtcagtgcagtgctcggggctccgtgtcc
cagcgctgtgactctgacggcaggtgcatctgtcgggctggatacgtgggccgcaggtgt
gacctcatgcgcccgcctcacgcccgcagggagacacggcggcccgtccaacaggttccc
atccaacacatccagagatgggaaagcagagggggctgccctcgaggggcttaccgccct
ggcacagggtctggcttacacatgcagggcgctcaaggctgcgtcccatgccactgcaat
tcattcggatcgaagtcgtttgattgtgacgagagcggtcagtgtcgctgtcagcctggt
gtgacgggacagaagtgtgaccgctgcgctcccggacacttcagcttccaggagggcggc
tgcacaccgtgccagtgtgcccatgtgggaaataactgtgacgctaacacaggtcagtgt
gtctgtccgcccaacaccgtgggagaaagatgtgacaaatgtgcgcccaaccactggggt
cacgacatcagcagcggctgtaagccgtgcggctgtaacgccttggggtccgtagcgcag
cagtgcaacgtgaacactggctgctgcatgtgccgtgagcagttcaggggcgagaaatgt
gacgagtgtaagctgggttacagagacttcccacaatgcatttcctgccagtgcacggcg
gcaggctcatcgctggacacctgcgatgcagagtctggcctctgtgcgtgtgcagacaga
agtgggcattgctcttgcaaggctaatgtggagggagtgaagtgtgaccgctgtaaggtg
ggctcgttcggcctcagccacaggaatccgctgggctgcagtcaatgctattgcttcggc
ttgagcagctcgtgtacggaggccacgggactcatccgtatgaggctgactctgatgcca
gaacagaccgttcttcctctcgtggacaaatccagtcgtcaggagatcacagcgggcgtg
agctttcagcatcctgacattatcgctaatgctgatgtggtccagcagcatctgagtgag
ccgtactactggagactgccaaaacagttcaaacgctccatgataacagcctatggtggg
aagctgaagtacgccatctattacgaggctcgtgatgagacgggccgcacctcttacgag
ccccaggtcatcataaagggcggccccaacaaggacaaggtcatggtccgccacatgcca
gcccttcagattggtcagctgacccgtcacgagattgacataacagagcatgagtggaaa
caccaggatgacaggccgatgtctcgtgaggatttcatggatgtgttgtttcatgttgaa
tatatcttaataaaggcctcacacggcagcgtcatgagacacagcaggatttctgagatc
actttggaggtggctgaggtggggacgccctcacaggacagtgaaatcgcccatcagatt
gagaaatgtgactgtcctctgggatacgccggtctctcctgtgaggaatgtgcagccggg
ttctacaggctctctgttcatgccggtggagccgcgtccagagcgggatttggcacctgt
gtccggtgccagtgcaatggacacagtgactcgtgtgatccagaaacagccgtctgccag
aactgtcagcacaacacagtcggtgataagtgtgagcgatgtgctgcagggttttacgga
gtagtgcgcggattcaccaacgactgcaaaccctgtgcttgtccactcctcaaccccgag
aacaactttagtcccacctgtcagatggagggttttaatgactaccgctgcaccgcctgt
cctgaaggctacgagggaaaacactgtgaaaggtgcgctcctggtttccatggtaacccg
agcgtgttgggcggccggtgcgaggagtgtaagtgcgacccttacagtgcatttcccaca
gcgtgtgacccgcgcaccggacagtgccagtgccgtcccggcgccagcggcctgaagtgt
gaccagtgcatggagaggcatgtgtgtggccctgagggcatcgtgtcttgtgacgacgac
tgcgcgggactcttgattcgtgacatggatcgtctcctgcgtttgattggcagcgtcaat
ctcactttgcccctccccctgccgtataaagtgctgtatcgcttcgagaacatgacggag
gagctgaagcacatgctttcccctcagagagccccggagagactgctgcagctggccgac
agtaacctgggcagtctggtcactgagatggacgaactgctcagcagggcgactaaagtg
tctgctgatggggagcagacggcagcagatgcagaacggagccgcaaaggagccgaggag
ctggggctttacgtcaggaacacactgctggctgctgaagctttacgggacaaagcgcgt
gaactgaacgcgacactgggctcgagggatgggactcctgagaagagcgtgaacgagatg
aacgatgaaatccaagccatgctcgcagaactacgcaaacgccagctctccggcaagaaa
aacattgctgacgaagaactgggtgccgcagaggctcttttggctaaagtgaagcgtttg
tttggagatccacaccaggccacagaggacctgaagaaggaggtcagtgataaaatgggc
gattacaggcagaaactggaggaagctcaggatctgctgagggatgcgcataacaaaacc
aagcaggccgaaggactggctgataacaaccaactgaaccttgaccgtctccagggaaag
agggatgtggctggtaaaaagaaaaaggaaatggagggaattttggcagaaggagagaag
atgctggacgaagctaacgctctctcagacagcatcaaccggggcaaagaggagctggag
gagatggcaagagagttgggtcccctgcatgatcaattggattttaaggtggcgcggttg
ggtcgcggcttggacgactccatccctgatctgctgctgagagcggaagaccacgccggc
cagctcaacgattctgctgccatactcgacagtattctagctgaggcgaagaatctgtcc
ttcaatgccaccgctgctttcaaagcttacaccaacatcaagaactacatcgatgaggcc
gataaggtggccaaagaggcaaagaaaaccagcattgatgctctacagctggcctcagga
cccaaaggatctctgaaagatcaggccaagggttcggttcagaagagccaccgcctgtgg
aacgaggccaaagagctgcagaatgacgtaaaagaaaatggagacaatctgggtgctctt
cagttcagactgaaaggagccaacaaaaagaacaaagacttacagaaaggcctgaacgac
acaatcgagaaactcaacgccatccctgatgatctggcagcgaagatccaggccactaag
ctgaaggcggcggatgccaacgacacggccatcgacgtgctgaaccgcctgaaggacatg
aacctcaacctgatgggcctgaagaggaactacagcaaactggaggatgacgtcaagaaa
gccaacaacctcatcaaagacccggagaaaaacattcatgcggcaggagctaaagtcaag
gatctggagaatgaggctgacaggttgctggagaaactgaagcccattcaggaactccaa
gacaacctgaagaaaaacatctcgcagatcaaagagctcatcaaccaggctcgcaaacag
gccaactctattaaggtgtctgtgtcgtccggtggagactgtatccgcacctaccggccg
gatatcaagaaaggccgctataacaccatcatcctccatgtgaagactgttgctgctgat
aacctgctcttctacctcggatcggccaaatatgtggatttcttggcaattgagatgagg
aagggtaaggtgaacttcctgtgggatgtgggatcaggggtcggccgtgtagaatatccc
gatctcatcattaacgatggaaactggcatcgaatcgaggcctcacgtatcgggctgaat
ggcactatctccgttcacgcactggagggacccaaaacaggcatcttaccaactctcaga
agtgccaaatcacctgagagtttcaccgtgctggatgtggaccagaacgcttacctgttt
gttggcggcatgctgggctcagtaaagaaagcagatgctgtgaaaaccaccacattctca
ggctgtatgggagagacgtctctggatggaaaacccatcggcttgtggaactacagagag
agaggtggagattgtgctggatgtgtggtcagtcctcagccggcagacactgaaggcacg
gttcagtttgacggagagggttatgctgccgtcagccgccccactagatggaaccccaac
gtttccacggtcatgttcaagttccgcacgttctccacagacgcgctcatgatgtacttc
gccaccaaggacatgaaggacttcatgagtgcagaactgagcgatgggaaggtgaaagtg
agttacgatctgggctcaggcacaggctccatcatcagtgacaaacgctataatgacggg
aaatggaagtcgttcaccatatcccgcatgaagaaagaagcaaccatcaccatagtgaac
atcgatactaatgaggacgagcagttgcgcatggcgtctccaggtggagctacaggcctc
aacctcagggaggatgagaggatgtattttggcggtgtacccaaggctggaaactacagg
tcagaggtggttttgaagaggttctctggctgtatgaaagacattgaagtttcccgaaca
ccatacaatctgctgagcagcccagactacacaggactgactaaaggctgctccattgag
aacctgcacaccgtgagcttccccaagcctgggtacatggagctgaagcctgtgtcgttt
gatgtgggctcagagatctctctctccttcagcacaaagagtgaaaatggtatcatcctg
ttcggcagaggaggactaacctctatgacgcagctcacgcagggcctgacgcccgttcac
atcccgcgccgctcacgcagacagaccggagagcccttcctgtctgtgcagctgaataaa
ggggctctggaggtgttggtgttcacaggcagcaggactccacgcagagctttcagaaaa
gcggagaagggaatactgcatgatgggagagagcactcactgcgcatccagagactcccg
ggagcctcttttactgtgcaggtggatgaagagccgcttttccagcagccattacccaac
gatcatcctctgagcatccatcggctcttcattggaggcatcccgtcagacgtagaaaca
ggtgtacagcggcccaacgtgccatttgagggctgcatctggaaccttcttatcaacaca
gtgcccatggatttctctcagcccgtggcctttgagaacgctgagattggtcattgtcct
gacctggccccgcctccacccccacccaagacccctgaagaggaggaagaggaggaagag
gaagaggctccacccaaaccagctctgaagcctacagaagcagttcgacctccaccacca
gcctccactgccgcgcccttcgctgaggtcatgcccatcacagacgcgcccaccagtgtc
aaagaacctgcggtgtcgtgcgcagcagaggcggaacctgttgtgctggaactggccaaa
cagttcggtctgtccagaaacagtcacatggcctttgagtttgacgacagaaaggtgaag
aacaggctgatcattgagttcgacatacgtacagaggcagactctgggttggtgttctac
atggccagaatcaaccacgctgacttcgccaccatccagctgaaggagggaatggctcac
ctgagctacgatctgggcagcggcaacacctccgtcagcgtgccgcgcatcatcaatgac
ggacagtggcacaagatccgcgtgataagagagaagcagagaggaattctcttgatcgac
ggccgttactccaaacacaccaccagcccaaagaaagctgatattctggatgtggtggga
atgttgtatgtgggaggtttaccactcaattacaccaccaaacgcattggaccggtgctg
tacagtatcaacgcttgcattaggaactttaagatgctgaatctgccattggacatggag
aaacccacgtccagctaccgtgtaggctcctgtttcgccaaccctgaaaaaggaacttat
tttgatggcacgggctatgctaaagttgtggactcatatcgagtgggtaacgacgtgtcc
gtggatctggagttcaggacgtcacagagcagcagcgttctgttaggcgtcagtagccag
aagatggacggactgggtattgaacttgtcaacggaaagcttttattccatgctgataat
ggagtgggacgcttcacagccgtatatgagccggatccggaggcggggctttgtgatgga
cagtggcacagtgtctccgcccacaagctgaagcaccgcctggagctcatcgtggatggc
aagaagtccgaggcagcaagttccgacgtccgctctgcctctgccgatacccaagaccct
gtgtatgtgggcggataccccgagggtctgaagcagtttggactcactataaacacaccg
tttaaaggctgcatgagaaatgtgaagatcactaaagctgggaagactctggaggtccag
atgaacaaagtcctggagcttaaaggagttcaacctctcacctgccctgctagttaa
DBGET
integrated database retrieval system
