Labeo rohita (rohu): 127182993
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Entry
127182993 CDS
T09007
Symbol
lrfn5b
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
127182993 (lrfn5b)
Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
127182993 (lrfn5b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
LRR_5
ig
Ig_2
LRR_9
fn3
DHU1_N
Sp38
LRR_14
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
127182993
NCBI-ProteinID:
XP_050994696
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All DBs
Position
20:33524602..33540840
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AA seq
760 aa
AA seq
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METLLVYLMVVVMALKAQKIQVCPKRCICQVLSPNLATLCDKKGLLFVPPNIDRRTVELR
LGDNFITGIKRKDFANMTKLVDLTLSRNTIGSIAPHAFNDLENLRALHLDSNRLTHITND
TFSGMSKLHHLILNNNQLTYIYIGAFNDLLALEELDLSYNNLESAPWIAIQLMTSLHTLN
LDHNMINYIPEGTFSGLQKLKRLDVTSNKLHKLPPDPVFQRAGVLATSGVLGPLSFALSF
GGNPLHCNCELLWLRRLRREDDLETCAAPQHLAGRYFWTVSEEEFLCEPPLITRHSQETR
ALEGQQVSLRCKARGDPDPIIHWIAPDGKLVFNSSRTVVHSDGTLDILISTVKDSGSFTC
VASNPSGEAQQTVDLLITKLPHFTNDTSMVQEPDPGSSDIATSAKTGGDGGSSMGNKGGQ
EKRVLISEITSSTALVKFNFQRNIPGIRMFQVQYNGTYDDSLVYRMIPPTSKSITVNNLA
AGTMYDLCVLAIYDDAMTTLTATRVVGCVHFATEPQYLRCHFMQSQFLGGTIVVIIGGVI
VASVLAFIIFLIVRYRVCQQEGADKGVELGDVRSQSEHQVCGIIKSMSKQVLGPDACRKV
SPQSESVPSRASKPALPDCTVTTSAASHSWHPASPSPVRPARTDTQANVEPDNTNKNNSA
KAHPTVRAYSTMVTPASRRAQLQNLHNYQTVPVGCVRVSRRHSLNVDSCKQPAYVSYQQP
LRSKRSLSMSGGDIPQMDAAERRSGRSSLSQSEWVLESTL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggagacgctactggtttatttgatggttgttgtaatggcattaaaggcccagaagatc
caagtatgtcccaagcgctgcatttgccaggttttgtcgcccaatctggccaccttgtgt
gataaaaaggggctgctgtttgtccctccaaacatcgacagacgcaccgtcgagctccgg
ctgggggacaatttcatcacgggcatcaagcggaaggatttcgccaacatgaccaaactg
gtggacctgactctctctaggaacacgataggatctatcgcgcctcacgctttcaacgat
ctggagaacctccgcgcccttcatctggacagcaaccgcttgacccacataacgaacgat
acgtttagcggcatgtccaagctgcaccatctcattctgaacaacaaccagctcacgtac
atctacataggagcgttcaacgaccttctcgctctggaagagctggatttgtcctacaac
aacctagagagcgcgccgtggatcgccatccagctcatgaccagcttgcacaccctaaac
ctggaccacaacatgatcaactacattcccgaagggaccttctccggccttcagaagctc
aagcgactggacgtcacctctaataagctccacaagcttccgcccgatccggtcttccag
cgcgctggcgttctggccacgtcgggcgttttgggtccgttgtctttcgcgttgagtttc
ggtggaaacccgctgcactgtaactgtgagttgttgtggcttagacgtctgcggcgcgag
gacgacttggagacatgtgcggctcctcagcatctcgccggacgctacttctggaccgta
tccgaggaggagttcctgtgcgagccgcctctcatcacccgacactcgcaggagacccgc
gcgctcgaaggacagcaggtttccttgcgctgcaaagcccgcggcgacccggatcccatc
atccactggatcgcccccgacgggaagctggtgttcaactccagtcgcaccgtggtccac
tcggacggaacgctggacatcctgatcagcacggtgaaggactccggatcgttcacctgc
gtggcgtccaacccgtctggagaggcgcagcaaacggtggatctgctcatcaccaaactt
ccacatttcaccaacgacaccagtatggtccaggagcccgacccaggatcgtccgacatc
gccacctcggccaagacgggcggagacggaggctcttcaatgggtaacaagggtggacag
gagaagagggtcctgatctctgagatcacctcgtccacagctctggtgaagttcaacttt
cagaggaatattccagggattcggatgttccaggtccaatacaatggcacttacgacgac
tcgttagtgtacagaatgattcctccgaccagtaaaagcatcacggtcaacaacctggcc
gcaggaaccatgtacgacctttgcgttctggccatctacgacgacgccatgaccacgctc
acggccacgcgcgtggtgggctgcgttcacttcgccaccgagccgcagtacctgcgttgc
cacttcatgcagtcgcagttcctcggcggcaccatcgtggtcatcatcggcggcgtgatc
gtggcgtccgtgctggccttcatcatcttcctcatcgtgcgctaccgggtgtgccagcag
gaaggggcggacaaaggcgtggagctgggcgacgtgcgctcgcagtccgagcatcaggtc
tgcggcatcatcaagtccatgtccaagcaggtcctgggtccggacgcgtgccggaaggtg
tcgccgcagagcgaatccgtcccgtcccgagcgtccaagccggctcttccggactgcacc
gtcaccacgtccgccgcgagccacagctggcaccccgcgtcccccagccccgtccgtccg
gcgcgcacggacacgcaagccaacgtagagccggacaacaccaacaagaacaactcggcc
aaggcgcatcccaccgtacgcgcctactccaccatggtgacgccggcgtcgcgcagagcg
cagctccagaacctccacaactaccagacggtcccggtgggctgcgtgcgcgtcagccgc
cgccactcgctcaacgtagactcgtgcaaacagccggcgtacgtgagctaccagcagccg
ctgcgctccaaacgcagtctgtcgatgagcggcggcgacattccccagatggacgcggcc
gagagacgcagcgggagatcctcgctgtcccagtccgagtgggttctggaaagcacatta
taa
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