Labeo rohita (rohu): 127183020
Help
Entry
127183020 CDS
T09007
Symbol
papola
Name
(RefSeq) poly(A) polymerase alpha isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127183020 (papola)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127183020 (papola)
Enzymes [BR:
lroh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
127183020 (papola)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
127183020 (papola)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
DUF4269
Motif
Other DBs
NCBI-GeneID:
127183020
NCBI-ProteinID:
XP_050994763
LinkDB
All DBs
Position
20:3889694..3908375
Genome browser
AA seq
740 aa
AA seq
DB search
MPFPISSQVQTVQQTPKHYGITSPISLALPKEADLVLTRKLTETLRPFGVFEEELELQRR
ILVLGKLNTLVKVWIRDVSEAKNIPTSVIDNVGGKIFTFGSYRLGVHTKGADIDALCVAP
RHVERSDFFSSFYEKLKEQEEVKDLRAVEEAFVPVIKLSFDGIEIDILFARLALQTIPEN
LDLRDDGLLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNIL
GFLGGVSWAMLVARTCQLYPNAVASTLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWD
PRVTPSDRYHLMPIITPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQSKADWSKL
FEAPNFFQKYKHYIVLLASAQTEKQHLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSF
PGPKEGTDKEEFSTMWVIGIVFKKMEGSENLNVDLTFDIQSFTDTVYRQAITSKMFEPDM
KITAMHVKRKQLQQLLPKMAIQRSKRKHSSDGLRVMNDGSLDLSLDSDNSMSVPSPTGPS
AAKLARASSPQGPTGTATNTSELQGKMDISKGNTLLTGVDGTKPDNVGTSSSNALRKGAA
SLKRPASPIQHDSEKKAKVDSVQQNPHPSSCASSGQASKRPASPTENETSKKAKVEEPST
PEAKSSGETDDHVAADPAQNIEVVPSEGESKVETELTAVETTEKIPLTQKTSNADLSDVP
ILPANPIPVVKNSIKLRLSR
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgccttttccaattagcagccaggtgcaaacagtgcagcagaccccaaagcattatggg
atcacatctcctatcagcttggcgctacctaaagaggccgatctggttctcacgcggaag
ctgacagagacacttcgaccctttggtgtctttgaggaggagctggagctgcagaggaga
atccttgtgcttgggaagctaaatactttggttaaggtgtggatccgagatgtcagtgaa
gctaagaatattcccacatccgtgattgataatgttggtggtaaaatcttcacatttgga
tcctacagacttggagttcatactaagggtgctgatattgacgctctctgcgttgcaccc
cgtcatgtggagagatctgacttcttctcctcgttttatgagaaattaaaagagcaggag
gaagtcaaagatctgagggcggtggaggaagcatttgtaccagtgataaagctgtccttt
gatggcattgagattgacatactatttgcccgactggcactacaaaccattccagagaac
ctggatttgcgagatgatggcttactgaagaaccttgacattcgctgcatccggagtttg
aacggttgcagagttactgatgaaattcttcacttggtgcccaacatagagaatttcaga
ctgactctaagagccatcaaactgtgggccaaacgtcataatatctactcaaatattctg
ggtttcctggggggcgtatcatgggccatgttggttgcaagaacttgccaactctacccc
aatgctgtggcatccacactggtccacaagtttttcttggttttttcaaagtgggaatgg
ccaaaccctgtccttctgaagcaacctgaagactgtaatctcaacctcccagtctgggat
ccaagggtaacccccagtgaccggtaccacctcatgccaatcatcacaccagcttaccct
caacaaaactccacttacaatgtgtccgcctccactcgggccatcatggtggaagagttc
aagcggggtctcgcaatcacggatgaaatattgcagagtaaagcagattggtccaaacta
tttgaagcaccaaacttctttcagaaatacaagcattatatagtgttgctagcaagcgca
cagacagagaagcagcacttagagtgggtgggcctcgtggaatcaaagatccgaatccta
gtgggaaacctggagaagaatgagttcatcacactcgctcatgtgaatccacagtcattc
ccgggaccaaaagagggaactgacaaggaggagttcagcacaatgtgggtaataggtatt
gtgttcaaaaaaatggagggatcagaaaatcttaacgtggacctgacgtttgacatccag
tctttcacggacacagtttaccggcaggcgattactagtaaaatgtttgagccagatatg
aaaatcacagccatgcacgtgaagaggaaacaactgcaacagctactgcccaaaatggcc
attcagagaagcaagagaaagcattcatcggatggccttcgtgtgatgaatgacggcagt
cttgacctatcacttgacagtgacaacagcatgtcagtgccgtcccccacaggcccttca
gctgccaagcttgcccgtgcatccagccctcagggccccactgggactgccacaaacacc
tcagaattgcagggaaaaatggacatttcaaaaggaaacacactcctgacaggtgtggat
ggcactaagccagataatgttgggacttccagcagcaatgccctacgaaagggtgcagct
tcactaaagcggcccgcctcacccattcagcatgactcggagaagaaagccaaagtggac
agtgtacaacagaaccctcatcctagttcatgtgcatcttctggccaggccagtaagaga
cctgcctcacccactgagaatgagacgtccaagaaagccaaagtagaggaaccctcaacc
ccagaagcaaagtcctcaggtgaaactgatgaccatgtagctgcagatccagcgcagaac
attgaagtggttccttcagagggtgaatctaaagtagagacagaattaacggcggtagaa
acaacagagaagataccacttacccagaaaacttctaacgctgatctgtctgatgttccg
atcctcccagccaaccccatccctgtggtcaagaactctatcaagctgagactcagcagg
tag
DBGET
integrated database retrieval system
